EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000017488 (Gene tree)
Gene ID: -
Gene Symbol: zgc:110045
Alias: -
Full Name: zgc:110045
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 10017 bases
Position: chrKQ548284.1:16197-26213
Accession: ZDB-GENE-050706-149
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000013908	KH_1	PF00013.29	5.9e-32	1	2
ENSPLAP00000013908	KH_1	PF00013.29	5.9e-32	2	2
ENSPLAP00000013908	KH_2	PF07650.17	9.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000022027	-	660	-	ENSPLAP00000013908	219 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000017488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000017488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000017488	zgc:110045	55	33.858	ENSPLAG00000009986	-	58	33.858
ENSPLAG00000017488	zgc:110045	74	40.000	ENSPLAG00000023099	hnrnpk	51	40.000
ENSPLAG00000017488	zgc:110045	92	68.571	ENSPLAG00000017518	PCBP2	77	74.863
ENSPLAG00000017488	zgc:110045	92	67.873	ENSPLAG00000011449	pcbp3	71	67.873
ENSPLAG00000017488	zgc:110045	92	68.095	ENSPLAG00000003153	pcbp2	59	75.978
ENSPLAG00000017488	zgc:110045	92	76.119	ENSPLAG00000004074	-	74	76.119
ENSPLAG00000017488	zgc:110045	92	35.433	ENSPLAG00000005993	igf2bp2b	56	35.433
ENSPLAG00000017488	zgc:110045	66	54.348	ENSPLAG00000011438	-	65	54.348

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000017488	zgc:110045	93	73.934	ENSG00000183570	PCBP3	89	66.990	Homo_sapiens
ENSPLAG00000017488	zgc:110045	96	92.661	ENSAPOG00000023735	zgc:110045	67	92.661	Acanthochromis_polyacanthus
ENSPLAG00000017488	zgc:110045	95	96.172	ENSACIG00000002577	zgc:110045	99	96.172	Amphilophus_citrinellus
ENSPLAG00000017488	zgc:110045	88	94.444	ENSAOCG00000005266	zgc:110045	94	94.444	Amphiprion_ocellaris
ENSPLAG00000017488	zgc:110045	96	91.743	ENSAPEG00000000729	zgc:110045	50	91.743	Amphiprion_percula
ENSPLAG00000017488	zgc:110045	79	96.226	ENSATEG00000011191	zgc:110045	65	96.226	Anabas_testudineus
ENSPLAG00000017488	zgc:110045	96	92.202	ENSACLG00000019285	zgc:110045	50	92.202	Astatotilapia_calliptera
ENSPLAG00000017488	zgc:110045	93	73.934	ENSBTAG00000030775	PCBP3	80	70.136	Bos_taurus
ENSPLAG00000017488	zgc:110045	93	73.934	ENSCAFG00000011907	PCBP3	72	73.934	Canis_familiaris
ENSPLAG00000017488	zgc:110045	93	76.098	ENSCHIG00000015841	PCBP3	71	76.098	Capra_hircus
ENSPLAG00000017488	zgc:110045	95	72.124	ENSTSYG00000005254	PCBP3	92	72.124	Carlito_syrichta
ENSPLAG00000017488	zgc:110045	93	56.373	ENSCAPG00000006767	PCBP3	63	56.373	Cavia_aperea
ENSPLAG00000017488	zgc:110045	90	75.243	ENSCPOG00000003648	PCBP3	71	75.243	Cavia_porcellus
ENSPLAG00000017488	zgc:110045	93	73.934	ENSCCAG00000024561	PCBP3	77	73.934	Cebus_capucinus
ENSPLAG00000017488	zgc:110045	93	73.934	ENSCATG00000038419	PCBP3	76	73.934	Cercocebus_atys
ENSPLAG00000017488	zgc:110045	90	75.243	ENSCLAG00000006667	PCBP3	71	75.243	Chinchilla_lanigera
ENSPLAG00000017488	zgc:110045	93	73.934	ENSCANG00000026757	PCBP3	76	73.934	Colobus_angolensis_palliatus
ENSPLAG00000017488	zgc:110045	90	75.243	ENSCGRG00001006836	Pcbp3	71	75.243	Cricetulus_griseus_chok1gshd
ENSPLAG00000017488	zgc:110045	90	75.243	ENSCGRG00000001837	Pcbp3	71	75.243	Cricetulus_griseus_crigri
ENSPLAG00000017488	zgc:110045	95	92.093	ENSCSEG00000010020	zgc:110045	91	92.093	Cynoglossus_semilaevis
ENSPLAG00000017488	zgc:110045	92	92.718	ENSCVAG00000004726	zgc:110045	93	92.718	Cyprinodon_variegatus
ENSPLAG00000017488	zgc:110045	95	77.419	ENSDARG00000057141	zgc:110045	97	77.419	Danio_rerio
ENSPLAG00000017488	zgc:110045	93	73.934	ENSDNOG00000049518	PCBP3	72	73.934	Dasypus_novemcinctus
ENSPLAG00000017488	zgc:110045	93	69.869	ENSDORG00000003640	Pcbp3	93	69.869	Dipodomys_ordii
ENSPLAG00000017488	zgc:110045	89	72.772	ENSEBUG00000009697	zgc:110045	87	74.302	Eptatretus_burgeri
ENSPLAG00000017488	zgc:110045	93	73.460	ENSEASG00005007068	PCBP3	76	73.460	Equus_asinus_asinus
ENSPLAG00000017488	zgc:110045	93	73.460	ENSECAG00000012413	PCBP3	76	73.460	Equus_caballus
ENSPLAG00000017488	zgc:110045	96	83.182	ENSELUG00000019784	zgc:110045	52	86.364	Esox_lucius
ENSPLAG00000017488	zgc:110045	93	73.934	ENSFCAG00000014812	PCBP3	76	73.934	Felis_catus
ENSPLAG00000017488	zgc:110045	93	73.239	ENSFDAG00000009117	PCBP3	75	75.243	Fukomys_damarensis
ENSPLAG00000017488	zgc:110045	88	93.532	ENSFHEG00000018838	-	92	93.532	Fundulus_heteroclitus
ENSPLAG00000017488	zgc:110045	92	84.977	ENSGMOG00000005953	zgc:110045	65	84.977	Gadus_morhua
ENSPLAG00000017488	zgc:110045	100	95.595	ENSGAFG00000017864	zgc:110045	100	95.595	Gambusia_affinis
ENSPLAG00000017488	zgc:110045	95	90.278	ENSGACG00000003044	zgc:110045	67	90.278	Gasterosteus_aculeatus
ENSPLAG00000017488	zgc:110045	93	73.934	ENSGGOG00000003683	PCBP3	76	73.934	Gorilla_gorilla
ENSPLAG00000017488	zgc:110045	96	92.202	ENSHBUG00000012495	zgc:110045	67	92.202	Haplochromis_burtoni
ENSPLAG00000017488	zgc:110045	93	75.610	ENSHGLG00000018620	PCBP3	74	75.610	Heterocephalus_glaber_female
ENSPLAG00000017488	zgc:110045	93	75.610	ENSHGLG00100013590	PCBP3	74	75.610	Heterocephalus_glaber_male
ENSPLAG00000017488	zgc:110045	95	88.532	ENSHCOG00000000818	zgc:110045	99	88.532	Hippocampus_comes
ENSPLAG00000017488	zgc:110045	95	74.312	ENSIPUG00000003932	zgc:110045	81	74.312	Ictalurus_punctatus
ENSPLAG00000017488	zgc:110045	90	75.243	ENSSTOG00000007178	PCBP3	71	75.243	Ictidomys_tridecemlineatus
ENSPLAG00000017488	zgc:110045	93	74.641	ENSJJAG00000021192	Pcbp3	71	75.243	Jaculus_jaculus
ENSPLAG00000017488	zgc:110045	85	90.769	ENSKMAG00000016179	-	95	90.769	Kryptolebias_marmoratus
ENSPLAG00000017488	zgc:110045	100	82.051	ENSLBEG00000023074	zgc:110045	56	97.059	Labrus_bergylta
ENSPLAG00000017488	zgc:110045	90	75.610	ENSLAFG00000020835	PCBP3	78	75.610	Loxodonta_africana
ENSPLAG00000017488	zgc:110045	93	73.934	ENSMFAG00000034574	PCBP3	76	73.934	Macaca_fascicularis
ENSPLAG00000017488	zgc:110045	93	73.934	ENSMMUG00000003825	PCBP3	93	62.397	Macaca_mulatta
ENSPLAG00000017488	zgc:110045	93	73.934	ENSMNEG00000035551	PCBP3	84	73.934	Macaca_nemestrina
ENSPLAG00000017488	zgc:110045	93	73.934	ENSMLEG00000038785	PCBP3	84	67.907	Mandrillus_leucophaeus
ENSPLAG00000017488	zgc:110045	96	90.367	ENSMAMG00000014389	zgc:110045	69	90.367	Mastacembelus_armatus
ENSPLAG00000017488	zgc:110045	96	92.202	ENSMZEG00005011785	zgc:110045	50	92.202	Maylandia_zebra
ENSPLAG00000017488	zgc:110045	90	78.283	ENSMAUG00000007036	Pcbp3	69	78.283	Mesocricetus_auratus
ENSPLAG00000017488	zgc:110045	93	73.460	ENSMICG00000012679	PCBP3	76	73.460	Microcebus_murinus
ENSPLAG00000017488	zgc:110045	90	75.243	ENSMOCG00000016127	Pcbp3	71	75.243	Microtus_ochrogaster
ENSPLAG00000017488	zgc:110045	88	93.782	ENSMMOG00000008399	zgc:110045	95	93.782	Mola_mola
ENSPLAG00000017488	zgc:110045	87	93.194	ENSMALG00000008763	zgc:110045	96	93.194	Monopterus_albus
ENSPLAG00000017488	zgc:110045	93	74.057	MGP_CAROLIEiJ_G0015475	Pcbp3	92	74.057	Mus_caroli
ENSPLAG00000017488	zgc:110045	93	74.057	ENSMUSG00000001120	Pcbp3	92	74.057	Mus_musculus
ENSPLAG00000017488	zgc:110045	93	74.057	MGP_PahariEiJ_G0030889	Pcbp3	92	74.057	Mus_pahari
ENSPLAG00000017488	zgc:110045	93	74.057	MGP_SPRETEiJ_G0016288	Pcbp3	92	74.057	Mus_spretus
ENSPLAG00000017488	zgc:110045	93	73.934	ENSMLUG00000003074	PCBP3	81	73.934	Myotis_lucifugus
ENSPLAG00000017488	zgc:110045	90	75.243	ENSNGAG00000005416	Pcbp3	71	75.243	Nannospalax_galili
ENSPLAG00000017488	zgc:110045	96	92.202	ENSNBRG00000017646	zgc:110045	50	92.202	Neolamprologus_brichardi
ENSPLAG00000017488	zgc:110045	93	73.934	ENSNLEG00000002639	PCBP3	76	73.934	Nomascus_leucogenys
ENSPLAG00000017488	zgc:110045	92	70.044	ENSMEUG00000012960	PCBP3	63	70.044	Notamacropus_eugenii
ENSPLAG00000017488	zgc:110045	90	78.283	ENSODEG00000012873	PCBP3	71	78.283	Octodon_degus
ENSPLAG00000017488	zgc:110045	96	92.202	ENSONIG00000010370	zgc:110045	53	92.202	Oreochromis_niloticus
ENSPLAG00000017488	zgc:110045	90	70.982	ENSOANG00000006265	PCBP3	79	70.982	Ornithorhynchus_anatinus
ENSPLAG00000017488	zgc:110045	96	92.202	ENSORLG00000014385	-	50	92.202	Oryzias_latipes
ENSPLAG00000017488	zgc:110045	100	93.607	ENSORLG00020003139	zgc:110045	93	93.607	Oryzias_latipes_hni
ENSPLAG00000017488	zgc:110045	96	91.743	ENSOMEG00000015459	-	50	91.743	Oryzias_melastigma
ENSPLAG00000017488	zgc:110045	93	69.668	ENSOARG00000012704	PCBP3	73	69.668	Ovis_aries
ENSPLAG00000017488	zgc:110045	93	73.934	ENSPPAG00000021940	PCBP3	76	73.934	Pan_paniscus
ENSPLAG00000017488	zgc:110045	93	73.934	ENSPPRG00000003933	PCBP3	76	73.934	Panthera_pardus
ENSPLAG00000017488	zgc:110045	93	55.769	ENSPTIG00000012038	PCBP3	75	56.585	Panthera_tigris_altaica
ENSPLAG00000017488	zgc:110045	92	46.445	ENSPTRG00000014010	PCBP3	79	44.493	Pan_troglodytes
ENSPLAG00000017488	zgc:110045	93	73.934	ENSPANG00000023631	PCBP3	76	73.934	Papio_anubis
ENSPLAG00000017488	zgc:110045	88	84.264	ENSPMGG00000021588	-	60	84.264	Periophthalmus_magnuspinnatus
ENSPLAG00000017488	zgc:110045	95	61.244	ENSPMGG00000022531	-	96	61.244	Periophthalmus_magnuspinnatus
ENSPLAG00000017488	zgc:110045	90	75.243	ENSPEMG00000000587	Pcbp3	68	79.570	Peromyscus_maniculatus_bairdii
ENSPLAG00000017488	zgc:110045	64	66.387	ENSPMAG00000004719	zgc:110045	93	66.387	Petromyzon_marinus
ENSPLAG00000017488	zgc:110045	95	94.419	ENSPFOG00000002348	zgc:110045	85	94.419	Poecilia_formosa
ENSPLAG00000017488	zgc:110045	100	95.595	ENSPMEG00000012762	zgc:110045	100	95.595	Poecilia_mexicana
ENSPLAG00000017488	zgc:110045	98	93.274	ENSPREG00000001797	zgc:110045	98	93.274	Poecilia_reticulata
ENSPLAG00000017488	zgc:110045	84	77.596	ENSPPYG00000011525	-	66	77.596	Pongo_abelii
ENSPLAG00000017488	zgc:110045	91	55.556	ENSPCAG00000001454	PCBP3	65	55.556	Procavia_capensis
ENSPLAG00000017488	zgc:110045	93	73.460	ENSPCOG00000013797	PCBP3	76	73.460	Propithecus_coquereli
ENSPLAG00000017488	zgc:110045	93	67.686	ENSPVAG00000000832	PCBP3	63	67.686	Pteropus_vampyrus
ENSPLAG00000017488	zgc:110045	95	96.651	ENSPNYG00000004637	zgc:110045	99	96.651	Pundamilia_nyererei
ENSPLAG00000017488	zgc:110045	98	75.330	ENSPNAG00000004501	zgc:110045	97	77.419	Pygocentrus_nattereri
ENSPLAG00000017488	zgc:110045	93	73.934	ENSRROG00000034567	PCBP3	76	73.934	Rhinopithecus_roxellana
ENSPLAG00000017488	zgc:110045	93	73.934	ENSSBOG00000005789	PCBP3	76	73.934	Saimiri_boliviensis_boliviensis
ENSPLAG00000017488	zgc:110045	95	93.023	ENSSMAG00000013541	zgc:110045	91	93.023	Scophthalmus_maximus
ENSPLAG00000017488	zgc:110045	96	92.202	ENSSLDG00000021064	zgc:110045	50	92.202	Seriola_lalandi_dorsalis
ENSPLAG00000017488	zgc:110045	63	79.562	ENSSARG00000007629	-	68	79.562	Sorex_araneus
ENSPLAG00000017488	zgc:110045	96	92.661	ENSSPAG00000000563	zgc:110045	67	92.661	Stegastes_partitus
ENSPLAG00000017488	zgc:110045	93	73.934	ENSSSCG00000023041	PCBP3	77	73.934	Sus_scrofa
ENSPLAG00000017488	zgc:110045	87	88.442	ENSTRUG00000017789	zgc:110045	98	88.442	Takifugu_rubripes
ENSPLAG00000017488	zgc:110045	83	82.474	ENSTNIG00000003546	zgc:110045	96	82.474	Tetraodon_nigroviridis
ENSPLAG00000017488	zgc:110045	90	57.282	ENSTBEG00000011882	-	63	57.767	Tupaia_belangeri
ENSPLAG00000017488	zgc:110045	93	76.847	ENSUAMG00000006491	PCBP3	92	66.667	Ursus_americanus
ENSPLAG00000017488	zgc:110045	83	74.603	ENSUMAG00000025403	PCBP3	70	74.603	Ursus_maritimus
ENSPLAG00000017488	zgc:110045	93	72.059	ENSVVUG00000023862	PCBP3	53	76.536	Vulpes_vulpes
ENSPLAG00000017488	zgc:110045	74	99.387	ENSXCOG00000005968	zgc:110045	87	99.387	Xiphophorus_couchianus
ENSPLAG00000017488	zgc:110045	96	94.495	ENSXMAG00000008030	zgc:110045	65	94.495	Xiphophorus_maculatus