EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000017490 (Gene tree)
Gene ID: 106935437
Gene Symbol: -
Alias: -
Full Name: embryonic polyadenylate-binding protein-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 16823 bases
Position: chrKQ547274.1:100257-117079
Accession: 106935437
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000013837	PABP	PF00658.18	1.8e-29	1	1
ENSPLAP00000028217	PABP	PF00658.18	2.1e-29	1	1
ENSPLAP00000013860	PABP	PF00658.18	2.3e-29	1	1
ENSPLAP00000013860	RRM_5	PF13893.6	2.1e-10	1	2
ENSPLAP00000013860	RRM_5	PF13893.6	2.1e-10	2	2
ENSPLAP00000013837	RRM_5	PF13893.6	6.2e-10	1	2
ENSPLAP00000013837	RRM_5	PF13893.6	6.2e-10	2	2
ENSPLAP00000028217	RRM_5	PF13893.6	1e-09	1	2
ENSPLAP00000028217	RRM_5	PF13893.6	1e-09	2	2
ENSPLAP00000013837	RRM_1	PF00076.22	6.3e-90	1	4
ENSPLAP00000013837	RRM_1	PF00076.22	6.3e-90	2	4
ENSPLAP00000013837	RRM_1	PF00076.22	6.3e-90	3	4
ENSPLAP00000013837	RRM_1	PF00076.22	6.3e-90	4	4
ENSPLAP00000013860	RRM_1	PF00076.22	9e-90	1	4
ENSPLAP00000013860	RRM_1	PF00076.22	9e-90	2	4
ENSPLAP00000013860	RRM_1	PF00076.22	9e-90	3	4
ENSPLAP00000013860	RRM_1	PF00076.22	9e-90	4	4
ENSPLAP00000028217	RRM_1	PF00076.22	1.1e-89	1	4
ENSPLAP00000028217	RRM_1	PF00076.22	1.1e-89	2	4
ENSPLAP00000028217	RRM_1	PF00076.22	1.1e-89	3	4
ENSPLAP00000028217	RRM_1	PF00076.22	1.1e-89	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000021965	-	1686	-	ENSPLAP00000013837	561 (aa)	-	-
ENSPLAT00000030089	-	2282	XM_015015898	ENSPLAP00000028217	619 (aa)	XP_014871384	UPI00072EB304
ENSPLAT00000021993	-	2378	XM_015015896	ENSPLAP00000013860	651 (aa)	XP_014871382	UPI00072E0491

Gene Model

Click here to download ENSPLAG00000017490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000017490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000017490	-	99	70.347	ENSPLAG00000004114	pabpc1a	98	70.347
ENSPLAG00000017490	-	60	34.884	ENSPLAG00000021601	-	62	34.884
ENSPLAG00000017490	-	58	100.000	ENSPLAG00000023686	-	92	100.000
ENSPLAG00000017490	-	64	37.333	ENSPLAG00000000059	rbm19	69	37.333
ENSPLAG00000017490	-	50	36.842	ENSPLAG00000000481	rbfox3b	57	37.681
ENSPLAG00000017490	-	66	44.000	ENSPLAG00000013925	-	52	44.000
ENSPLAG00000017490	-	100	67.675	ENSPLAG00000010112	pabpc4	98	67.670
ENSPLAG00000017490	-	65	31.837	ENSPLAG00000007718	tial1	85	31.837
ENSPLAG00000017490	-	99	70.266	ENSPLAG00000001388	pabpc1b	98	70.295
ENSPLAG00000017490	-	60	30.435	ENSPLAG00000009390	tia1l	70	30.435
ENSPLAG00000017490	-	56	34.247	ENSPLAG00000018202	celf3b	64	34.247
ENSPLAG00000017490	-	52	34.884	ENSPLAG00000020446	-	71	30.159
ENSPLAG00000017490	-	66	30.622	ENSPLAG00000005203	ELAVL2	92	30.622
ENSPLAG00000017490	-	64	37.079	ENSPLAG00000008127	elavl1a	88	37.079
ENSPLAG00000017490	-	65	36.957	ENSPLAG00000001401	sf3b4	73	39.506
ENSPLAG00000017490	-	64	31.522	ENSPLAG00000020810	ELAVL1	98	31.522

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000017490	-	99	69.206	ENSG00000101104	PABPC1L	98	75.926	Homo_sapiens
ENSPLAG00000017490	-	99	82.343	ENSAPOG00000010842	pabpc1l	99	82.343	Acanthochromis_polyacanthus
ENSPLAG00000017490	-	89	80.682	ENSAMEG00000004099	PABPC1L	100	64.571	Ailuropoda_melanoleuca
ENSPLAG00000017490	-	100	87.719	ENSACIG00000021004	-	100	93.204	Amphilophus_citrinellus
ENSPLAG00000017490	-	100	84.505	ENSAOCG00000006167	-	100	84.505	Amphiprion_ocellaris
ENSPLAG00000017490	-	100	83.209	ENSAPEG00000010558	-	99	89.450	Amphiprion_percula
ENSPLAG00000017490	-	100	86.804	ENSATEG00000007428	pabpc1l	100	87.122	Anabas_testudineus
ENSPLAG00000017490	-	98	71.981	ENSAPLG00000008415	PABPC1L	99	71.930	Anas_platyrhynchos
ENSPLAG00000017490	-	99	73.824	ENSACAG00000011841	PABPC1L	99	73.824	Anolis_carolinensis
ENSPLAG00000017490	-	99	68.447	ENSANAG00000026826	PABPC1L	99	68.447	Aotus_nancymaae
ENSPLAG00000017490	-	100	88.658	ENSACLG00000024791	pabpc1l	100	88.658	Astatotilapia_calliptera
ENSPLAG00000017490	-	100	80.604	ENSAMXG00000013552	pabpc1l	100	80.604	Astyanax_mexicanus
ENSPLAG00000017490	-	69	87.500	ENSBTAG00000055300	-	100	87.500	Bos_taurus
ENSPLAG00000017490	-	73	62.456	ENSBTAG00000016849	PABPC1L	83	64.000	Bos_taurus
ENSPLAG00000017490	-	65	80.460	ENSCJAG00000038506	-	100	80.460	Callithrix_jacchus
ENSPLAG00000017490	-	99	68.608	ENSCJAG00000017628	PABPC1L	99	68.608	Callithrix_jacchus
ENSPLAG00000017490	-	99	71.861	ENSCAFG00000009573	PABPC1L	100	64.969	Canis_familiaris
ENSPLAG00000017490	-	99	69.144	ENSCAFG00020013828	PABPC1L	99	69.144	Canis_lupus_dingo
ENSPLAG00000017490	-	98	68.309	ENSCHIG00000025759	PABPC1L	91	68.309	Capra_hircus
ENSPLAG00000017490	-	99	68.071	ENSTSYG00000006645	PABPC1L	99	68.071	Carlito_syrichta
ENSPLAG00000017490	-	98	63.158	ENSCAPG00000014519	PABPC1L	99	63.158	Cavia_aperea
ENSPLAG00000017490	-	99	65.650	ENSCPOG00000013633	PABPC1L	99	65.650	Cavia_porcellus
ENSPLAG00000017490	-	99	67.961	ENSCCAG00000023338	PABPC1L	99	68.608	Cebus_capucinus
ENSPLAG00000017490	-	99	69.206	ENSCATG00000034065	PABPC1L	99	69.256	Cercocebus_atys
ENSPLAG00000017490	-	99	64.216	ENSCLAG00000005298	PABPC1L	99	65.378	Chinchilla_lanigera
ENSPLAG00000017490	-	99	68.810	ENSCSAG00000014242	PABPC1L	99	68.860	Chlorocebus_sabaeus
ENSPLAG00000017490	-	78	80.045	ENSCPBG00000017755	-	99	80.045	Chrysemys_picta_bellii
ENSPLAG00000017490	-	55	89.916	ENSCPBG00000007810	-	81	89.916	Chrysemys_picta_bellii
ENSPLAG00000017490	-	83	73.563	ENSCING00000002796	-	83	73.563	Ciona_intestinalis
ENSPLAG00000017490	-	99	61.592	ENSCSAVG00000004246	-	89	71.523	Ciona_savignyi
ENSPLAG00000017490	-	98	63.063	ENSCSAVG00000003102	-	100	85.034	Ciona_savignyi
ENSPLAG00000017490	-	99	65.815	ENSCANG00000037530	PABPC1L	99	65.869	Colobus_angolensis_palliatus
ENSPLAG00000017490	-	99	61.798	ENSCGRG00001021938	Pabpc1l	99	61.798	Cricetulus_griseus_chok1gshd
ENSPLAG00000017490	-	99	61.798	ENSCGRG00000007946	Pabpc1l	99	61.798	Cricetulus_griseus_crigri
ENSPLAG00000017490	-	99	82.447	ENSCSEG00000021295	pabpc1l	99	82.447	Cynoglossus_semilaevis
ENSPLAG00000017490	-	100	91.304	ENSCVAG00000015943	-	99	96.947	Cyprinodon_variegatus
ENSPLAG00000017490	-	99	78.822	ENSDARG00000002597	pabpc1l	88	95.385	Danio_rerio
ENSPLAG00000017490	-	99	67.994	ENSDNOG00000048450	PABPC1L	99	67.994	Dasypus_novemcinctus
ENSPLAG00000017490	-	99	65.909	ENSDORG00000001067	Pabpc1l	99	65.909	Dipodomys_ordii
ENSPLAG00000017490	-	95	76.423	ENSETEG00000009969	PABPC1L	72	76.423	Echinops_telfairi
ENSPLAG00000017490	-	69	85.119	ENSEASG00005023408	-	100	85.119	Equus_asinus_asinus
ENSPLAG00000017490	-	56	74.684	ENSEASG00005023407	-	64	74.684	Equus_asinus_asinus
ENSPLAG00000017490	-	72	67.857	ENSECAG00000040139	-	88	63.525	Equus_caballus
ENSPLAG00000017490	-	99	66.126	ENSEEUG00000005978	PABPC1L	99	66.126	Erinaceus_europaeus
ENSPLAG00000017490	-	100	81.883	ENSELUG00000001811	pabpc1l	100	81.883	Esox_lucius
ENSPLAG00000017490	-	99	68.790	ENSFCAG00000011692	PABPC1L	99	68.790	Felis_catus
ENSPLAG00000017490	-	82	76.261	ENSFALG00000005372	PABPC1L	97	68.611	Ficedula_albicollis
ENSPLAG00000017490	-	99	67.632	ENSFDAG00000008291	PABPC1L	99	67.632	Fukomys_damarensis
ENSPLAG00000017490	-	100	93.871	ENSFHEG00000003398	pabpc1l	100	93.871	Fundulus_heteroclitus
ENSPLAG00000017490	-	99	82.212	ENSGMOG00000004437	pabpc1l	99	82.212	Gadus_morhua
ENSPLAG00000017490	-	95	74.349	ENSGALG00000004123	PABPC1L	99	80.523	Gallus_gallus
ENSPLAG00000017490	-	100	97.849	ENSGAFG00000021057	pabpc1l	100	97.849	Gambusia_affinis
ENSPLAG00000017490	-	99	86.817	ENSGACG00000002792	pabpc1l	100	86.817	Gasterosteus_aculeatus
ENSPLAG00000017490	-	99	75.401	ENSGAGG00000000589	PABPC1L	97	78.899	Gopherus_agassizii
ENSPLAG00000017490	-	99	69.206	ENSGGOG00000004584	PABPC1L	99	69.256	Gorilla_gorilla
ENSPLAG00000017490	-	100	88.498	ENSHBUG00000006134	pabpc1l	100	88.498	Haplochromis_burtoni
ENSPLAG00000017490	-	100	65.655	ENSHGLG00000008434	PABPC1L	99	66.184	Heterocephalus_glaber_female
ENSPLAG00000017490	-	64	86.517	ENSHGLG00100019506	-	100	86.905	Heterocephalus_glaber_male
ENSPLAG00000017490	-	100	65.655	ENSHGLG00100012151	PABPC1L	99	66.184	Heterocephalus_glaber_male
ENSPLAG00000017490	-	99	84.859	ENSHCOG00000009270	pabpc1l	100	84.859	Hippocampus_comes
ENSPLAG00000017490	-	65	62.644	ENSIPUG00000006760	-	88	62.644	Ictalurus_punctatus
ENSPLAG00000017490	-	100	80.207	ENSIPUG00000012602	pabpc1l	100	80.207	Ictalurus_punctatus
ENSPLAG00000017490	-	65	62.644	ENSIPUG00000006780	-	85	62.644	Ictalurus_punctatus
ENSPLAG00000017490	-	99	67.909	ENSSTOG00000003739	PABPC1L	99	67.909	Ictidomys_tridecemlineatus
ENSPLAG00000017490	-	99	52.973	ENSJJAG00000022406	Pabpc1l	99	51.535	Jaculus_jaculus
ENSPLAG00000017490	-	100	88.357	ENSKMAG00000016847	pabpc1l	100	88.357	Kryptolebias_marmoratus
ENSPLAG00000017490	-	100	87.380	ENSLBEG00000010084	pabpc1l	100	87.380	Labrus_bergylta
ENSPLAG00000017490	-	99	72.274	ENSLACG00000005762	PABPC1L	99	72.274	Latimeria_chalumnae
ENSPLAG00000017490	-	99	79.873	ENSLOCG00000007519	pabpc1l	99	79.873	Lepisosteus_oculatus
ENSPLAG00000017490	-	99	66.983	ENSLAFG00000003553	PABPC1L	100	66.983	Loxodonta_africana
ENSPLAG00000017490	-	99	69.530	ENSMFAG00000040365	PABPC1L	99	69.579	Macaca_fascicularis
ENSPLAG00000017490	-	99	68.395	ENSMNEG00000032298	PABPC1L	99	68.447	Macaca_nemestrina
ENSPLAG00000017490	-	99	69.206	ENSMLEG00000043139	PABPC1L	99	69.256	Mandrillus_leucophaeus
ENSPLAG00000017490	-	97	87.664	ENSMAMG00000011854	pabpc1l	97	87.664	Mastacembelus_armatus
ENSPLAG00000017490	-	100	88.658	ENSMZEG00005023713	pabpc1l	100	88.658	Maylandia_zebra
ENSPLAG00000017490	-	99	72.496	ENSMGAG00000003674	PABPC1L	99	72.496	Meleagris_gallopavo
ENSPLAG00000017490	-	99	60.925	ENSMOCG00000013186	Pabpc1l	99	60.925	Microtus_ochrogaster
ENSPLAG00000017490	-	99	86.014	ENSMMOG00000020574	-	90	96.154	Mola_mola
ENSPLAG00000017490	-	97	70.292	ENSMODG00000016198	PABPC1L	99	70.292	Monodelphis_domestica
ENSPLAG00000017490	-	99	84.977	ENSMALG00000021622	pabpc1l	100	86.820	Monopterus_albus
ENSPLAG00000017490	-	99	61.920	MGP_CAROLIEiJ_G0024627	Pabpc1l	99	61.920	Mus_caroli
ENSPLAG00000017490	-	99	61.920	ENSMUSG00000054582	Pabpc1l	99	61.920	Mus_musculus
ENSPLAG00000017490	-	100	62.360	MGP_PahariEiJ_G0026071	Pabpc1l	100	62.360	Mus_pahari
ENSPLAG00000017490	-	99	61.920	MGP_SPRETEiJ_G0025549	Pabpc1l	99	61.920	Mus_spretus
ENSPLAG00000017490	-	99	68.790	ENSMPUG00000017646	PABPC1L	99	68.790	Mustela_putorius_furo
ENSPLAG00000017490	-	98	67.258	ENSMLUG00000006324	PABPC1L	98	67.258	Myotis_lucifugus
ENSPLAG00000017490	-	99	63.226	ENSNGAG00000010458	Pabpc1l	99	63.226	Nannospalax_galili
ENSPLAG00000017490	-	100	88.179	ENSNBRG00000016633	pabpc1l	100	93.976	Neolamprologus_brichardi
ENSPLAG00000017490	-	89	66.667	ENSMEUG00000007905	-	89	66.667	Notamacropus_eugenii
ENSPLAG00000017490	-	99	67.419	ENSOPRG00000011846	PABPC1L	99	67.419	Ochotona_princeps
ENSPLAG00000017490	-	99	64.499	ENSODEG00000015482	PABPC1L	99	64.499	Octodon_degus
ENSPLAG00000017490	-	63	80.625	ENSODEG00000002920	-	97	80.625	Octodon_degus
ENSPLAG00000017490	-	100	88.658	ENSONIG00000017314	pabpc1l	100	88.658	Oreochromis_niloticus
ENSPLAG00000017490	-	90	62.877	ENSOANG00000015793	-	100	62.877	Ornithorhynchus_anatinus
ENSPLAG00000017490	-	99	70.378	ENSOCUG00000003005	PABPC1L	96	70.798	Oryctolagus_cuniculus
ENSPLAG00000017490	-	100	87.979	ENSORLG00000010322	pabpc1l	100	89.286	Oryzias_latipes
ENSPLAG00000017490	-	100	86.262	ENSORLG00020021193	pabpc1l	100	89.286	Oryzias_latipes_hni
ENSPLAG00000017490	-	100	86.422	ENSORLG00015017018	pabpc1l	100	89.252	Oryzias_latipes_hsok
ENSPLAG00000017490	-	100	86.495	ENSOMEG00000010789	pabpc1l	100	86.495	Oryzias_melastigma
ENSPLAG00000017490	-	99	68.262	ENSOGAG00000032999	PABPC1L	99	68.262	Otolemur_garnettii
ENSPLAG00000017490	-	99	68.447	ENSOARG00000004578	PABPC1L	99	68.447	Ovis_aries
ENSPLAG00000017490	-	99	69.368	ENSPPAG00000039677	PABPC1L	99	69.417	Pan_paniscus
ENSPLAG00000017490	-	68	67.593	ENSPPRG00000019327	-	98	67.593	Panthera_pardus
ENSPLAG00000017490	-	99	68.760	ENSPTIG00000006524	PABPC1L	99	68.760	Panthera_tigris_altaica
ENSPLAG00000017490	-	69	76.235	ENSPTRG00000013531	PABPC1L	98	76.235	Pan_troglodytes
ENSPLAG00000017490	-	99	69.206	ENSPANG00000018788	PABPC1L	99	69.256	Papio_anubis
ENSPLAG00000017490	-	58	83.969	ENSPKIG00000016810	-	93	83.969	Paramormyrops_kingsleyae
ENSPLAG00000017490	-	100	78.219	ENSPKIG00000007322	pabpc1l	100	78.219	Paramormyrops_kingsleyae
ENSPLAG00000017490	-	74	81.535	ENSPSIG00000013289	PABPC1L	99	81.535	Pelodiscus_sinensis
ENSPLAG00000017490	-	77	84.103	ENSPMGG00000023121	-	91	84.103	Periophthalmus_magnuspinnatus
ENSPLAG00000017490	-	69	96.212	ENSPMGG00000023117	pabpc1l	97	94.419	Periophthalmus_magnuspinnatus
ENSPLAG00000017490	-	99	60.582	ENSPEMG00000020671	Pabpc1l	99	61.031	Peromyscus_maniculatus_bairdii
ENSPLAG00000017490	-	100	99.677	ENSPFOG00000013241	pabpc1l	100	99.677	Poecilia_formosa
ENSPLAG00000017490	-	58	100.000	ENSPMEG00000009185	-	88	100.000	Poecilia_mexicana
ENSPLAG00000017490	-	100	98.618	ENSPMEG00000007677	pabpc1l	100	98.618	Poecilia_mexicana
ENSPLAG00000017490	-	73	98.783	ENSPREG00000015886	pabpc1l	99	98.783	Poecilia_reticulata
ENSPLAG00000017490	-	99	69.206	ENSPPYG00000011042	PABPC1L	99	69.256	Pongo_abelii
ENSPLAG00000017490	-	67	85.938	ENSPCAG00000011787	-	75	85.938	Procavia_capensis
ENSPLAG00000017490	-	99	67.943	ENSPCOG00000020630	PABPC1L	99	68.471	Propithecus_coquereli
ENSPLAG00000017490	-	99	68.760	ENSPVAG00000012663	PABPC1L	99	68.760	Pteropus_vampyrus
ENSPLAG00000017490	-	99	87.873	ENSPNYG00000004101	pabpc1l	100	94.217	Pundamilia_nyererei
ENSPLAG00000017490	-	100	74.086	ENSPNAG00000021248	pabpc1l	100	74.086	Pygocentrus_nattereri
ENSPLAG00000017490	-	99	61.353	ENSRNOG00000012750	Pabpc1l	99	60.979	Rattus_norvegicus
ENSPLAG00000017490	-	99	69.206	ENSRBIG00000035381	PABPC1L	99	69.256	Rhinopithecus_bieti
ENSPLAG00000017490	-	99	69.044	ENSRROG00000044498	PABPC1L	99	69.094	Rhinopithecus_roxellana
ENSPLAG00000017490	-	99	68.447	ENSSBOG00000009532	-	99	68.447	Saimiri_boliviensis_boliviensis
ENSPLAG00000017490	-	98	65.130	ENSSHAG00000011446	PABPC1L	100	65.130	Sarcophilus_harrisii
ENSPLAG00000017490	-	100	79.841	ENSSFOG00015017304	pabpc1l	100	79.841	Scleropages_formosus
ENSPLAG00000017490	-	96	93.651	ENSSMAG00000010516	pabpc1l	98	98.450	Scophthalmus_maximus
ENSPLAG00000017490	-	100	88.019	ENSSDUG00000014743	pabpc1l	100	88.019	Seriola_dumerili
ENSPLAG00000017490	-	98	87.218	ENSSLDG00000006981	pabpc1l	98	93.151	Seriola_lalandi_dorsalis
ENSPLAG00000017490	-	99	72.013	ENSSPUG00000004233	PABPC1L	99	72.013	Sphenodon_punctatus
ENSPLAG00000017490	-	100	85.205	ENSSPAG00000017137	pabpc1l	100	85.205	Stegastes_partitus
ENSPLAG00000017490	-	99	67.496	ENSSSCG00000007382	PABPC1L	99	67.496	Sus_scrofa
ENSPLAG00000017490	-	99	71.028	ENSTGUG00000005114	PABPC1L	100	71.028	Taeniopygia_guttata
ENSPLAG00000017490	-	97	85.832	ENSTRUG00000011085	pabpc1l	97	85.832	Takifugu_rubripes
ENSPLAG00000017490	-	99	84.244	ENSTNIG00000017903	pabpc1l	98	84.244	Tetraodon_nigroviridis
ENSPLAG00000017490	-	94	77.055	ENSTBEG00000002851	PABPC1L	79	77.055	Tupaia_belangeri
ENSPLAG00000017490	-	94	66.269	ENSTTRG00000007618	PABPC1L	100	66.501	Tursiops_truncatus
ENSPLAG00000017490	-	99	70.017	ENSUAMG00000017682	PABPC1L	99	70.017	Ursus_americanus
ENSPLAG00000017490	-	73	73.538	ENSUMAG00000025436	PABPC1L	92	73.538	Ursus_maritimus
ENSPLAG00000017490	-	99	74.704	ENSVVUG00000018939	PABPC1L	99	74.704	Vulpes_vulpes
ENSPLAG00000017490	-	99	69.668	ENSXETG00000022831	pabpc1l	99	69.668	Xenopus_tropicalis
ENSPLAG00000017490	-	100	96.931	ENSXCOG00000005459	pabpc1l	100	96.931	Xiphophorus_couchianus
ENSPLAG00000017490	-	100	98.061	ENSXMAG00000017135	pabpc1l	100	98.061	Xiphophorus_maculatus