EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000017559 (Gene tree)
Gene ID: 106934791
Gene Symbol: synj1
Alias: -
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 36685 bases
Position: chrKQ547172.1:18336-55020
Accession: 106934791
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000028296	Exo_endo_phos	PF03372.23	2.9e-14	1	1
ENSPLAP00000028285	DUF1866	PF08952.11	4.5e-56	1	1
ENSPLAP00000013966	DUF1866	PF08952.11	4.6e-56	1	1
ENSPLAP00000013970	DUF1866	PF08952.11	4.7e-56	1	1
ENSPLAP00000028296	DUF1866	PF08952.11	8e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000030134	-	8600	-	ENSPLAP00000013970	1657 (aa)	-	-
ENSPLAT00000022120	-	8555	XM_015014911	ENSPLAP00000013966	1642 (aa)	XP_014870397	-
ENSPLAT00000022145	-	8624	XM_015014920	ENSPLAP00000028296	1345 (aa)	XP_014870406	-
ENSPLAT00000022106	-	8522	-	ENSPLAP00000028285	1631 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000017559's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000017559's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000017559	synj1	100	65.385	ENSG00000159082	SYNJ1	100	82.783	Homo_sapiens
ENSPLAG00000017559	synj1	100	83.286	ENSAPOG00000002809	synj1	99	85.640	Acanthochromis_polyacanthus
ENSPLAG00000017559	synj1	96	65.147	ENSAMEG00000015028	SYNJ1	83	64.342	Ailuropoda_melanoleuca
ENSPLAG00000017559	synj1	99	85.380	ENSACIG00000008857	synj1	98	85.997	Amphilophus_citrinellus
ENSPLAG00000017559	synj1	100	87.052	ENSAOCG00000009835	synj1	98	88.326	Amphiprion_ocellaris
ENSPLAG00000017559	synj1	100	87.712	ENSAPEG00000021010	synj1	99	83.613	Amphiprion_percula
ENSPLAG00000017559	synj1	100	88.527	ENSATEG00000002306	synj1	99	81.958	Anabas_testudineus
ENSPLAG00000017559	synj1	91	66.770	ENSAPLG00000011832	SYNJ1	82	63.338	Anas_platyrhynchos
ENSPLAG00000017559	synj1	91	69.118	ENSACAG00000003006	-	84	75.964	Anolis_carolinensis
ENSPLAG00000017559	synj1	96	65.854	ENSANAG00000027325	SYNJ1	85	74.352	Aotus_nancymaae
ENSPLAG00000017559	synj1	100	88.487	ENSACLG00000002255	synj1	99	86.572	Astatotilapia_calliptera
ENSPLAG00000017559	synj1	99	81.413	ENSAMXG00000008208	synj1	98	75.212	Astyanax_mexicanus
ENSPLAG00000017559	synj1	93	70.218	ENSBTAG00000003063	SYNJ1	99	65.182	Bos_taurus
ENSPLAG00000017559	synj1	100	64.672	ENSCJAG00000009187	SYNJ1	85	74.441	Callithrix_jacchus
ENSPLAG00000017559	synj1	96	68.593	ENSCAFG00000009041	SYNJ1	99	67.021	Canis_familiaris
ENSPLAG00000017559	synj1	95	73.535	ENSCAFG00020025776	SYNJ1	98	64.401	Canis_lupus_dingo
ENSPLAG00000017559	synj1	99	64.769	ENSCHIG00000005095	SYNJ1	84	66.812	Capra_hircus
ENSPLAG00000017559	synj1	100	65.371	ENSTSYG00000014541	SYNJ1	96	65.362	Carlito_syrichta
ENSPLAG00000017559	synj1	90	73.282	ENSCAPG00000014483	SYNJ1	75	73.282	Cavia_aperea
ENSPLAG00000017559	synj1	96	69.609	ENSCPOG00000012182	SYNJ1	99	64.891	Cavia_porcellus
ENSPLAG00000017559	synj1	96	67.248	ENSCCAG00000020825	SYNJ1	85	74.263	Cebus_capucinus
ENSPLAG00000017559	synj1	94	68.429	ENSCATG00000033891	SYNJ1	100	67.251	Cercocebus_atys
ENSPLAG00000017559	synj1	98	64.286	ENSCLAG00000009796	SYNJ1	100	82.158	Chinchilla_lanigera
ENSPLAG00000017559	synj1	94	66.090	ENSCSAG00000009654	SYNJ1	83	74.776	Chlorocebus_sabaeus
ENSPLAG00000017559	synj1	74	71.753	ENSCHOG00000012390	SYNJ1	54	71.753	Choloepus_hoffmanni
ENSPLAG00000017559	synj1	90	69.624	ENSCPBG00000006402	SYNJ1	96	70.073	Chrysemys_picta_bellii
ENSPLAG00000017559	synj1	100	64.932	ENSCANG00000031359	SYNJ1	84	74.776	Colobus_angolensis_palliatus
ENSPLAG00000017559	synj1	99	68.363	ENSCGRG00001010861	Synj1	100	63.184	Cricetulus_griseus_chok1gshd
ENSPLAG00000017559	synj1	100	64.103	ENSCGRG00000015749	Synj1	100	81.871	Cricetulus_griseus_crigri
ENSPLAG00000017559	synj1	95	83.994	ENSCSEG00000019614	synj1	97	88.352	Cynoglossus_semilaevis
ENSPLAG00000017559	synj1	100	91.880	ENSCVAG00000019250	synj1	100	92.173	Cyprinodon_variegatus
ENSPLAG00000017559	synj1	100	80.000	ENSDARG00000025011	synj1	100	82.116	Danio_rerio
ENSPLAG00000017559	synj1	94	63.841	ENSDNOG00000010732	SYNJ1	70	72.004	Dasypus_novemcinctus
ENSPLAG00000017559	synj1	54	79.057	ENSDORG00000014735	-	100	82.014	Dipodomys_ordii
ENSPLAG00000017559	synj1	83	77.778	ENSETEG00000018674	SYNJ1	59	77.778	Echinops_telfairi
ENSPLAG00000017559	synj1	57	46.903	ENSEBUG00000016247	synj1	72	55.877	Eptatretus_burgeri
ENSPLAG00000017559	synj1	99	67.810	ENSEASG00005006287	SYNJ1	98	77.789	Equus_asinus_asinus
ENSPLAG00000017559	synj1	99	68.503	ENSECAG00000004829	SYNJ1	84	76.679	Equus_caballus
ENSPLAG00000017559	synj1	89	69.888	ENSEEUG00000005150	SYNJ1	81	69.888	Erinaceus_europaeus
ENSPLAG00000017559	synj1	100	76.254	ENSELUG00000009731	synj1	98	71.397	Esox_lucius
ENSPLAG00000017559	synj1	99	65.154	ENSFCAG00000012498	SYNJ1	100	63.214	Felis_catus
ENSPLAG00000017559	synj1	73	59.724	ENSFALG00000004680	SYNJ1	61	70.118	Ficedula_albicollis
ENSPLAG00000017559	synj1	95	65.660	ENSFDAG00000016818	SYNJ1	100	82.158	Fukomys_damarensis
ENSPLAG00000017559	synj1	100	91.826	ENSFHEG00000017689	synj1	99	88.128	Fundulus_heteroclitus
ENSPLAG00000017559	synj1	79	82.512	ENSGMOG00000014852	synj1	81	84.525	Gadus_morhua
ENSPLAG00000017559	synj1	96	67.462	ENSGALG00000034317	SYNJ1	83	65.660	Gallus_gallus
ENSPLAG00000017559	synj1	99	94.627	ENSGAFG00000019466	synj1	100	94.370	Gambusia_affinis
ENSPLAG00000017559	synj1	99	79.127	ENSGACG00000020575	synj1	99	81.627	Gasterosteus_aculeatus
ENSPLAG00000017559	synj1	96	68.926	ENSGAGG00000022523	SYNJ1	83	75.157	Gopherus_agassizii
ENSPLAG00000017559	synj1	100	65.313	ENSGGOG00000015945	SYNJ1	100	67.325	Gorilla_gorilla
ENSPLAG00000017559	synj1	100	88.561	ENSHBUG00000007774	synj1	99	86.197	Haplochromis_burtoni
ENSPLAG00000017559	synj1	95	64.602	ENSHGLG00000006420	SYNJ1	100	81.871	Heterocephalus_glaber_female
ENSPLAG00000017559	synj1	95	66.437	ENSHGLG00100012591	SYNJ1	100	81.871	Heterocephalus_glaber_male
ENSPLAG00000017559	synj1	95	88.571	ENSHCOG00000012774	synj1	96	93.186	Hippocampus_comes
ENSPLAG00000017559	synj1	98	81.784	ENSIPUG00000010691	SYNJ1	99	72.683	Ictalurus_punctatus
ENSPLAG00000017559	synj1	97	65.563	ENSSTOG00000015806	SYNJ1	100	63.897	Ictidomys_tridecemlineatus
ENSPLAG00000017559	synj1	97	60.054	ENSJJAG00000020168	Synj1	82	59.696	Jaculus_jaculus
ENSPLAG00000017559	synj1	100	84.952	ENSKMAG00000004221	synj1	99	80.898	Kryptolebias_marmoratus
ENSPLAG00000017559	synj1	100	83.941	ENSLBEG00000015081	synj1	94	92.683	Labrus_bergylta
ENSPLAG00000017559	synj1	89	74.506	ENSLACG00000005928	SYNJ1	70	74.821	Latimeria_chalumnae
ENSPLAG00000017559	synj1	97	70.014	ENSLOCG00000009230	synj1	94	79.912	Lepisosteus_oculatus
ENSPLAG00000017559	synj1	96	65.311	ENSLAFG00000011806	SYNJ1	69	74.842	Loxodonta_africana
ENSPLAG00000017559	synj1	98	63.265	ENSMFAG00000018883	SYNJ1	99	63.928	Macaca_fascicularis
ENSPLAG00000017559	synj1	94	65.889	ENSMMUG00000004624	SYNJ1	99	65.303	Macaca_mulatta
ENSPLAG00000017559	synj1	94	68.429	ENSMNEG00000040077	SYNJ1	94	65.087	Macaca_nemestrina
ENSPLAG00000017559	synj1	100	64.408	ENSMLEG00000037029	SYNJ1	96	65.084	Mandrillus_leucophaeus
ENSPLAG00000017559	synj1	100	88.317	ENSMAMG00000013404	synj1	99	82.679	Mastacembelus_armatus
ENSPLAG00000017559	synj1	100	86.941	ENSMZEG00005024358	synj1	99	87.500	Maylandia_zebra
ENSPLAG00000017559	synj1	94	66.130	ENSMGAG00000014522	SYNJ1	84	62.812	Meleagris_gallopavo
ENSPLAG00000017559	synj1	100	64.103	ENSMAUG00000009743	Synj1	100	81.583	Mesocricetus_auratus
ENSPLAG00000017559	synj1	96	69.161	ENSMICG00000034953	SYNJ1	100	67.643	Microcebus_murinus
ENSPLAG00000017559	synj1	99	80.000	ENSMMOG00000010203	synj1	98	83.486	Mola_mola
ENSPLAG00000017559	synj1	82	69.476	ENSMODG00000021073	SYNJ1	83	71.117	Monodelphis_domestica
ENSPLAG00000017559	synj1	100	88.131	ENSMALG00000014015	synj1	99	82.640	Monopterus_albus
ENSPLAG00000017559	synj1	97	64.650	MGP_CAROLIEiJ_G0020951	Synj1	100	81.871	Mus_caroli
ENSPLAG00000017559	synj1	97	64.869	ENSMUSG00000022973	Synj1	100	81.871	Mus_musculus
ENSPLAG00000017559	synj1	100	63.566	MGP_PahariEiJ_G0016656	Synj1	100	81.871	Mus_pahari
ENSPLAG00000017559	synj1	97	65.182	MGP_SPRETEiJ_G0021857	Synj1	100	82.014	Mus_spretus
ENSPLAG00000017559	synj1	90	67.922	ENSMPUG00000001153	SYNJ1	83	63.766	Mustela_putorius_furo
ENSPLAG00000017559	synj1	54	59.518	ENSMLUG00000005764	-	57	69.394	Myotis_lucifugus
ENSPLAG00000017559	synj1	52	77.650	ENSMLUG00000026584	-	100	80.655	Myotis_lucifugus
ENSPLAG00000017559	synj1	98	64.245	ENSNGAG00000000453	Synj1	100	82.446	Nannospalax_galili
ENSPLAG00000017559	synj1	100	82.851	ENSNBRG00000011936	synj1	99	80.574	Neolamprologus_brichardi
ENSPLAG00000017559	synj1	78	66.533	ENSNLEG00000003734	SYNJ1	99	62.512	Nomascus_leucogenys
ENSPLAG00000017559	synj1	73	62.381	ENSMEUG00000004158	-	64	64.142	Notamacropus_eugenii
ENSPLAG00000017559	synj1	89	76.727	ENSOPRG00000013602	SYNJ1	63	76.727	Ochotona_princeps
ENSPLAG00000017559	synj1	54	79.334	ENSODEG00000002409	-	100	82.302	Octodon_degus
ENSPLAG00000017559	synj1	99	80.474	ENSONIG00000004667	synj1	100	80.565	Oreochromis_niloticus
ENSPLAG00000017559	synj1	91	65.120	ENSOANG00000006929	SYNJ1	82	64.951	Ornithorhynchus_anatinus
ENSPLAG00000017559	synj1	97	65.448	ENSOCUG00000001420	SYNJ1	84	63.818	Oryctolagus_cuniculus
ENSPLAG00000017559	synj1	100	85.357	ENSORLG00000004320	synj1	99	86.015	Oryzias_latipes
ENSPLAG00000017559	synj1	99	82.448	ENSORLG00020011994	synj1	97	84.094	Oryzias_latipes_hni
ENSPLAG00000017559	synj1	100	84.826	ENSORLG00015018077	synj1	96	81.197	Oryzias_latipes_hsok
ENSPLAG00000017559	synj1	99	85.873	ENSOMEG00000014322	synj1	99	85.821	Oryzias_melastigma
ENSPLAG00000017559	synj1	96	62.729	ENSOGAG00000006010	SYNJ1	68	71.889	Otolemur_garnettii
ENSPLAG00000017559	synj1	94	66.092	ENSOARG00000013414	SYNJ1	93	57.818	Ovis_aries
ENSPLAG00000017559	synj1	100	65.313	ENSPPAG00000026784	SYNJ1	84	74.865	Pan_paniscus
ENSPLAG00000017559	synj1	99	65.154	ENSPPRG00000023469	SYNJ1	100	63.214	Panthera_pardus
ENSPLAG00000017559	synj1	99	65.227	ENSPTIG00000007930	SYNJ1	100	63.286	Panthera_tigris_altaica
ENSPLAG00000017559	synj1	96	68.082	ENSPTRG00000048135	-	99	69.057	Pan_troglodytes
ENSPLAG00000017559	synj1	100	65.313	ENSPTRG00000023787	SYNJ1	99	69.057	Pan_troglodytes
ENSPLAG00000017559	synj1	100	64.479	ENSPANG00000022531	SYNJ1	99	65.157	Papio_anubis
ENSPLAG00000017559	synj1	84	81.898	ENSPKIG00000022603	synj1	89	83.813	Paramormyrops_kingsleyae
ENSPLAG00000017559	synj1	99	84.746	ENSPMGG00000016831	synj1	98	88.621	Periophthalmus_magnuspinnatus
ENSPLAG00000017559	synj1	100	64.255	ENSPEMG00000018767	Synj1	100	82.158	Peromyscus_maniculatus_bairdii
ENSPLAG00000017559	synj1	78	57.397	ENSPMAG00000002887	synj1	85	54.828	Petromyzon_marinus
ENSPLAG00000017559	synj1	95	67.781	ENSPCIG00000016372	SYNJ1	81	75.840	Phascolarctos_cinereus
ENSPLAG00000017559	synj1	100	95.528	ENSPFOG00000016886	synj1	100	99.622	Poecilia_formosa
ENSPLAG00000017559	synj1	100	98.782	ENSPMEG00000007643	synj1	100	98.782	Poecilia_mexicana
ENSPLAG00000017559	synj1	100	96.326	ENSPREG00000012412	synj1	100	96.326	Poecilia_reticulata
ENSPLAG00000017559	synj1	90	68.031	ENSPPYG00000011365	SYNJ1	78	74.596	Pongo_abelii
ENSPLAG00000017559	synj1	79	81.429	ENSPCAG00000009906	SYNJ1	58	81.429	Procavia_capensis
ENSPLAG00000017559	synj1	100	61.220	ENSPCOG00000024841	SYNJ1	82	74.820	Propithecus_coquereli
ENSPLAG00000017559	synj1	90	64.534	ENSPVAG00000000892	SYNJ1	82	62.399	Pteropus_vampyrus
ENSPLAG00000017559	synj1	100	85.514	ENSPNYG00000022989	synj1	99	87.328	Pundamilia_nyererei
ENSPLAG00000017559	synj1	84	85.325	ENSPNAG00000021119	synj1	91	86.607	Pygocentrus_nattereri
ENSPLAG00000017559	synj1	100	64.618	ENSRNOG00000002051	Synj1	85	74.573	Rattus_norvegicus
ENSPLAG00000017559	synj1	100	64.932	ENSRBIG00000034477	SYNJ1	84	74.686	Rhinopithecus_bieti
ENSPLAG00000017559	synj1	100	64.932	ENSRROG00000039256	SYNJ1	84	74.776	Rhinopithecus_roxellana
ENSPLAG00000017559	synj1	99	66.279	ENSSBOG00000021001	SYNJ1	85	74.419	Saimiri_boliviensis_boliviensis
ENSPLAG00000017559	synj1	94	65.831	ENSSHAG00000008538	SYNJ1	70	74.887	Sarcophilus_harrisii
ENSPLAG00000017559	synj1	100	80.529	ENSSFOG00015006095	synj1	97	73.978	Scleropages_formosus
ENSPLAG00000017559	synj1	99	86.982	ENSSMAG00000018066	synj1	97	87.150	Scophthalmus_maximus
ENSPLAG00000017559	synj1	100	87.852	ENSSDUG00000013058	synj1	99	84.601	Seriola_dumerili
ENSPLAG00000017559	synj1	100	87.481	ENSSLDG00000021406	synj1	99	88.500	Seriola_lalandi_dorsalis
ENSPLAG00000017559	synj1	95	68.478	ENSSPUG00000012552	SYNJ1	84	65.953	Sphenodon_punctatus
ENSPLAG00000017559	synj1	95	89.347	ENSSPAG00000006812	SYNJ1	99	84.188	Stegastes_partitus
ENSPLAG00000017559	synj1	99	88.521	ENSSPAG00000017029	synj1	98	88.424	Stegastes_partitus
ENSPLAG00000017559	synj1	97	68.045	ENSSSCG00000012035	SYNJ1	85	74.753	Sus_scrofa
ENSPLAG00000017559	synj1	100	65.410	ENSTGUG00000013445	SYNJ1	71	73.689	Taeniopygia_guttata
ENSPLAG00000017559	synj1	100	82.900	ENSTRUG00000006907	synj1	97	82.044	Takifugu_rubripes
ENSPLAG00000017559	synj1	99	75.000	ENSTNIG00000009940	synj1	83	85.714	Tetraodon_nigroviridis
ENSPLAG00000017559	synj1	85	83.544	ENSTBEG00000016298	SYNJ1	57	83.544	Tupaia_belangeri
ENSPLAG00000017559	synj1	99	58.464	ENSTTRG00000002222	SYNJ1	85	57.660	Tursiops_truncatus
ENSPLAG00000017559	synj1	96	69.847	ENSUAMG00000018606	SYNJ1	99	78.980	Ursus_americanus
ENSPLAG00000017559	synj1	99	68.548	ENSUMAG00000018419	SYNJ1	99	78.980	Ursus_maritimus
ENSPLAG00000017559	synj1	88	81.429	ENSVPAG00000001241	SYNJ1	59	81.429	Vicugna_pacos
ENSPLAG00000017559	synj1	96	66.267	ENSVVUG00000023125	SYNJ1	100	63.244	Vulpes_vulpes
ENSPLAG00000017559	synj1	95	65.015	ENSXETG00000009899	synj1	86	62.219	Xenopus_tropicalis
ENSPLAG00000017559	synj1	99	93.294	ENSXCOG00000011896	synj1	99	95.083	Xiphophorus_couchianus
ENSPLAG00000017559	synj1	99	97.535	ENSXMAG00000017524	synj1	100	95.961	Xiphophorus_maculatus