EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000017659 (Gene tree)
Gene ID: 106956656
Gene Symbol: tarbp2
Alias: -
Full Name: TARBP2%2C RISC loading complex RNA binding subunit
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 8172 bases
Position: chrKQ545356.1:448257-456428
Accession: 106956656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000014060	dsrm	PF00035.26	2.7e-35	1	2
ENSPLAP00000014060	dsrm	PF00035.26	2.7e-35	2	2
ENSPLAP00000014060	DND1_DSRM	PF14709.7	4.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000022278	-	3402	XM_015047638	ENSPLAP00000014060	345 (aa)	XP_014903124	UPI00072D9F6C

Gene Model

Click here to download ENSPLAG00000017659's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000017659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000017659	tarbp2	92	41.824	ENSPLAG00000021726	prkra	91	41.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000017659	tarbp2	100	65.574	ENSG00000139546	TARBP2	88	92.208	Homo_sapiens
ENSPLAG00000017659	tarbp2	100	93.043	ENSAPOG00000019892	tarbp2	100	93.043	Acanthochromis_polyacanthus
ENSPLAG00000017659	tarbp2	100	66.213	ENSAMEG00000012601	TARBP2	100	66.393	Ailuropoda_melanoleuca
ENSPLAG00000017659	tarbp2	100	89.855	ENSACIG00000016780	tarbp2	100	89.855	Amphilophus_citrinellus
ENSPLAG00000017659	tarbp2	100	92.464	ENSAOCG00000005201	tarbp2	100	92.464	Amphiprion_ocellaris
ENSPLAG00000017659	tarbp2	100	92.464	ENSAPEG00000008376	tarbp2	100	92.464	Amphiprion_percula
ENSPLAG00000017659	tarbp2	100	91.014	ENSATEG00000025012	tarbp2	100	91.014	Anabas_testudineus
ENSPLAG00000017659	tarbp2	99	69.638	ENSACAG00000001100	TARBP2	99	69.638	Anolis_carolinensis
ENSPLAG00000017659	tarbp2	100	65.301	ENSANAG00000034453	TARBP2	94	75.676	Aotus_nancymaae
ENSPLAG00000017659	tarbp2	97	88.657	ENSACLG00000018569	tarbp2	97	88.657	Astatotilapia_calliptera
ENSPLAG00000017659	tarbp2	100	81.356	ENSAMXG00000016665	tarbp2	100	84.104	Astyanax_mexicanus
ENSPLAG00000017659	tarbp2	100	66.393	ENSBTAG00000000435	TARBP2	100	67.486	Bos_taurus
ENSPLAG00000017659	tarbp2	100	65.574	ENSCJAG00000018668	TARBP2	100	66.667	Callithrix_jacchus
ENSPLAG00000017659	tarbp2	100	68.876	ENSCAFG00000006874	TARBP2	100	68.876	Canis_familiaris
ENSPLAG00000017659	tarbp2	100	65.847	ENSCAFG00020020735	TARBP2	100	68.696	Canis_lupus_dingo
ENSPLAG00000017659	tarbp2	100	65.241	ENSCHIG00000026017	TARBP2	100	66.486	Capra_hircus
ENSPLAG00000017659	tarbp2	100	66.120	ENSTSYG00000035683	TARBP2	94	75.676	Carlito_syrichta
ENSPLAG00000017659	tarbp2	65	70.667	ENSCAPG00000008981	TARBP2	100	70.667	Cavia_aperea
ENSPLAG00000017659	tarbp2	100	67.486	ENSCPOG00000001009	TARBP2	100	67.486	Cavia_porcellus
ENSPLAG00000017659	tarbp2	95	67.622	ENSCCAG00000033025	TARBP2	91	92.453	Cebus_capucinus
ENSPLAG00000017659	tarbp2	100	65.574	ENSCATG00000026344	TARBP2	94	75.676	Cercocebus_atys
ENSPLAG00000017659	tarbp2	100	67.213	ENSCLAG00000009175	TARBP2	100	67.213	Chinchilla_lanigera
ENSPLAG00000017659	tarbp2	100	65.574	ENSCSAG00000005479	TARBP2	100	66.393	Chlorocebus_sabaeus
ENSPLAG00000017659	tarbp2	100	69.252	ENSCPBG00000000654	TARBP2	100	71.471	Chrysemys_picta_bellii
ENSPLAG00000017659	tarbp2	100	65.574	ENSCANG00000040415	TARBP2	91	90.566	Colobus_angolensis_palliatus
ENSPLAG00000017659	tarbp2	100	66.575	ENSCGRG00001011856	TARBP2	100	66.575	Cricetulus_griseus_chok1gshd
ENSPLAG00000017659	tarbp2	100	66.575	ENSCGRG00000009088	TARBP2	100	68.724	Cricetulus_griseus_crigri
ENSPLAG00000017659	tarbp2	100	89.565	ENSCSEG00000010631	tarbp2	100	89.565	Cynoglossus_semilaevis
ENSPLAG00000017659	tarbp2	100	95.652	ENSCVAG00000009832	tarbp2	100	95.652	Cyprinodon_variegatus
ENSPLAG00000017659	tarbp2	100	82.471	ENSDARG00000070471	tarbp2	100	82.759	Danio_rerio
ENSPLAG00000017659	tarbp2	100	66.393	ENSDNOG00000002144	TARBP2	100	66.667	Dasypus_novemcinctus
ENSPLAG00000017659	tarbp2	63	71.493	ENSDORG00000001390	Tarbp2	91	71.493	Dipodomys_ordii
ENSPLAG00000017659	tarbp2	86	80.612	ENSETEG00000002458	TARBP2	82	80.612	Echinops_telfairi
ENSPLAG00000017659	tarbp2	95	57.927	ENSEBUG00000002377	tarbp2	98	58.537	Eptatretus_burgeri
ENSPLAG00000017659	tarbp2	100	66.304	ENSEASG00005010030	TARBP2	100	67.213	Equus_asinus_asinus
ENSPLAG00000017659	tarbp2	100	68.661	ENSECAG00000011695	TARBP2	94	75.676	Equus_caballus
ENSPLAG00000017659	tarbp2	84	63.492	ENSEEUG00000001128	-	99	62.821	Erinaceus_europaeus
ENSPLAG00000017659	tarbp2	100	86.207	ENSELUG00000010642	tarbp2	100	87.966	Esox_lucius
ENSPLAG00000017659	tarbp2	100	66.393	ENSFCAG00000007757	TARBP2	100	67.213	Felis_catus
ENSPLAG00000017659	tarbp2	100	66.940	ENSFDAG00000011932	TARBP2	100	69.672	Fukomys_damarensis
ENSPLAG00000017659	tarbp2	94	95.679	ENSFHEG00000016118	tarbp2	100	95.679	Fundulus_heteroclitus
ENSPLAG00000017659	tarbp2	100	84.726	ENSGMOG00000001290	tarbp2	100	84.726	Gadus_morhua
ENSPLAG00000017659	tarbp2	63	71.689	ENSGALG00000038939	-	83	71.689	Gallus_gallus
ENSPLAG00000017659	tarbp2	100	98.551	ENSGAFG00000013341	tarbp2	100	98.551	Gambusia_affinis
ENSPLAG00000017659	tarbp2	100	87.324	ENSGACG00000006645	tarbp2	100	87.606	Gasterosteus_aculeatus
ENSPLAG00000017659	tarbp2	100	69.529	ENSGAGG00000021169	TARBP2	100	70.083	Gopherus_agassizii
ENSPLAG00000017659	tarbp2	95	67.908	ENSGGOG00000012637	TARBP2	72	92.982	Gorilla_gorilla
ENSPLAG00000017659	tarbp2	100	89.855	ENSHBUG00000018639	tarbp2	100	89.855	Haplochromis_burtoni
ENSPLAG00000017659	tarbp2	100	66.667	ENSHGLG00000001284	TARBP2	100	66.667	Heterocephalus_glaber_female
ENSPLAG00000017659	tarbp2	100	66.667	ENSHGLG00100011274	TARBP2	100	66.667	Heterocephalus_glaber_male
ENSPLAG00000017659	tarbp2	100	85.797	ENSHCOG00000001027	tarbp2	100	85.797	Hippocampus_comes
ENSPLAG00000017659	tarbp2	100	81.948	ENSIPUG00000023701	tarbp2	100	81.948	Ictalurus_punctatus
ENSPLAG00000017659	tarbp2	95	68.768	ENSSTOG00000003678	TARBP2	100	68.852	Ictidomys_tridecemlineatus
ENSPLAG00000017659	tarbp2	100	93.043	ENSKMAG00000012142	tarbp2	100	93.043	Kryptolebias_marmoratus
ENSPLAG00000017659	tarbp2	100	89.548	ENSLBEG00000015027	tarbp2	100	89.548	Labrus_bergylta
ENSPLAG00000017659	tarbp2	95	66.159	ENSLACG00000007087	TARBP2	95	66.869	Latimeria_chalumnae
ENSPLAG00000017659	tarbp2	100	80.286	ENSLOCG00000005711	tarbp2	100	80.286	Lepisosteus_oculatus
ENSPLAG00000017659	tarbp2	71	65.267	ENSLAFG00000002620	TARBP2	93	65.267	Loxodonta_africana
ENSPLAG00000017659	tarbp2	100	65.574	ENSMFAG00000013567	TARBP2	94	75.676	Macaca_fascicularis
ENSPLAG00000017659	tarbp2	100	65.847	ENSMMUG00000018492	TARBP2	100	66.667	Macaca_mulatta
ENSPLAG00000017659	tarbp2	100	65.574	ENSMNEG00000036477	TARBP2	94	75.676	Macaca_nemestrina
ENSPLAG00000017659	tarbp2	100	65.574	ENSMLEG00000029583	TARBP2	94	75.676	Mandrillus_leucophaeus
ENSPLAG00000017659	tarbp2	95	89.297	ENSMAMG00000010272	tarbp2	97	87.500	Mastacembelus_armatus
ENSPLAG00000017659	tarbp2	100	89.855	ENSMZEG00005006895	tarbp2	100	89.855	Maylandia_zebra
ENSPLAG00000017659	tarbp2	100	66.575	ENSMAUG00000019805	Tarbp2	100	66.849	Mesocricetus_auratus
ENSPLAG00000017659	tarbp2	94	68.696	ENSMICG00000027441	TARBP2	94	75.676	Microcebus_murinus
ENSPLAG00000017659	tarbp2	100	66.849	ENSMOCG00000003691	Tarbp2	100	66.849	Microtus_ochrogaster
ENSPLAG00000017659	tarbp2	94	89.666	ENSMMOG00000010374	tarbp2	100	89.666	Mola_mola
ENSPLAG00000017659	tarbp2	100	90.145	ENSMALG00000009773	tarbp2	100	90.145	Monopterus_albus
ENSPLAG00000017659	tarbp2	100	65.479	MGP_CAROLIEiJ_G0020356	Tarbp2	91	92.453	Mus_caroli
ENSPLAG00000017659	tarbp2	100	65.479	ENSMUSG00000023051	Tarbp2	91	92.453	Mus_musculus
ENSPLAG00000017659	tarbp2	100	65.205	MGP_PahariEiJ_G0020355	Tarbp2	91	92.453	Mus_pahari
ENSPLAG00000017659	tarbp2	100	65.479	MGP_SPRETEiJ_G0021249	Tarbp2	91	92.453	Mus_spretus
ENSPLAG00000017659	tarbp2	100	66.849	ENSMPUG00000005944	TARBP2	100	66.849	Mustela_putorius_furo
ENSPLAG00000017659	tarbp2	100	66.667	ENSMLUG00000010035	TARBP2	100	67.486	Myotis_lucifugus
ENSPLAG00000017659	tarbp2	100	65.574	ENSNLEG00000017690	TARBP2	94	75.676	Nomascus_leucogenys
ENSPLAG00000017659	tarbp2	100	69.942	ENSMEUG00000001916	TARBP2	100	69.942	Notamacropus_eugenii
ENSPLAG00000017659	tarbp2	65	72.000	ENSOPRG00000011397	TARBP2	100	72.000	Ochotona_princeps
ENSPLAG00000017659	tarbp2	60	73.009	ENSODEG00000013413	TARBP2	100	73.009	Octodon_degus
ENSPLAG00000017659	tarbp2	95	85.920	ENSONIG00000005115	tarbp2	96	85.920	Oreochromis_niloticus
ENSPLAG00000017659	tarbp2	100	68.579	ENSOCUG00000005700	TARBP2	100	68.579	Oryctolagus_cuniculus
ENSPLAG00000017659	tarbp2	100	90.725	ENSORLG00000005209	tarbp2	100	90.725	Oryzias_latipes
ENSPLAG00000017659	tarbp2	100	90.435	ENSORLG00020017755	tarbp2	100	90.435	Oryzias_latipes_hni
ENSPLAG00000017659	tarbp2	100	90.725	ENSORLG00015013237	tarbp2	100	90.725	Oryzias_latipes_hsok
ENSPLAG00000017659	tarbp2	100	91.304	ENSOMEG00000018860	tarbp2	100	91.304	Oryzias_melastigma
ENSPLAG00000017659	tarbp2	100	65.301	ENSOGAG00000001744	TARBP2	100	66.120	Otolemur_garnettii
ENSPLAG00000017659	tarbp2	100	66.120	ENSOARG00000016437	TARBP2	100	67.213	Ovis_aries
ENSPLAG00000017659	tarbp2	100	65.574	ENSPPAG00000030429	TARBP2	94	75.676	Pan_paniscus
ENSPLAG00000017659	tarbp2	100	66.667	ENSPPRG00000000189	TARBP2	100	67.213	Panthera_pardus
ENSPLAG00000017659	tarbp2	100	67.582	ENSPTIG00000007859	TARBP2	100	67.582	Panthera_tigris_altaica
ENSPLAG00000017659	tarbp2	100	65.574	ENSPTRG00000005020	TARBP2	94	75.676	Pan_troglodytes
ENSPLAG00000017659	tarbp2	100	65.574	ENSPANG00000010689	TARBP2	94	75.676	Papio_anubis
ENSPLAG00000017659	tarbp2	100	79.775	ENSPKIG00000002455	tarbp2	100	79.775	Paramormyrops_kingsleyae
ENSPLAG00000017659	tarbp2	100	89.565	ENSPMGG00000006497	tarbp2	100	89.565	Periophthalmus_magnuspinnatus
ENSPLAG00000017659	tarbp2	100	66.027	ENSPEMG00000014285	Tarbp2	100	66.027	Peromyscus_maniculatus_bairdii
ENSPLAG00000017659	tarbp2	92	61.059	ENSPMAG00000000105	tarbp2	99	61.059	Petromyzon_marinus
ENSPLAG00000017659	tarbp2	100	69.942	ENSPCIG00000006672	TARBP2	92	69.942	Phascolarctos_cinereus
ENSPLAG00000017659	tarbp2	100	99.420	ENSPFOG00000007586	tarbp2	100	99.420	Poecilia_formosa
ENSPLAG00000017659	tarbp2	100	99.420	ENSPMEG00000007775	tarbp2	100	99.420	Poecilia_mexicana
ENSPLAG00000017659	tarbp2	100	98.841	ENSPREG00000007815	tarbp2	100	98.841	Poecilia_reticulata
ENSPLAG00000017659	tarbp2	95	67.674	ENSPPYG00000004583	TARBP2	95	67.674	Pongo_abelii
ENSPLAG00000017659	tarbp2	78	64.261	ENSPCAG00000005352	TARBP2	60	72.398	Procavia_capensis
ENSPLAG00000017659	tarbp2	100	66.120	ENSPCOG00000013102	TARBP2	94	75.676	Propithecus_coquereli
ENSPLAG00000017659	tarbp2	100	65.583	ENSPVAG00000012286	TARBP2	100	65.583	Pteropus_vampyrus
ENSPLAG00000017659	tarbp2	100	89.855	ENSPNYG00000014125	tarbp2	100	89.855	Pundamilia_nyererei
ENSPLAG00000017659	tarbp2	100	84.682	ENSPNAG00000011128	tarbp2	100	84.971	Pygocentrus_nattereri
ENSPLAG00000017659	tarbp2	100	65.479	ENSRNOG00000042355	Tarbp2	100	65.668	Rattus_norvegicus
ENSPLAG00000017659	tarbp2	100	65.668	ENSRBIG00000027150	TARBP2	94	75.676	Rhinopithecus_bieti
ENSPLAG00000017659	tarbp2	100	65.668	ENSRROG00000044783	TARBP2	94	75.676	Rhinopithecus_roxellana
ENSPLAG00000017659	tarbp2	100	65.301	ENSSBOG00000027305	TARBP2	94	75.676	Saimiri_boliviensis_boliviensis
ENSPLAG00000017659	tarbp2	94	72.531	ENSSHAG00000007064	TARBP2	100	72.531	Sarcophilus_harrisii
ENSPLAG00000017659	tarbp2	100	79.224	ENSSFOG00015010784	tarbp2	100	80.447	Scleropages_formosus
ENSPLAG00000017659	tarbp2	100	90.313	ENSSMAG00000012769	tarbp2	100	90.313	Scophthalmus_maximus
ENSPLAG00000017659	tarbp2	100	92.174	ENSSDUG00000018818	tarbp2	100	92.174	Seriola_dumerili
ENSPLAG00000017659	tarbp2	100	91.594	ENSSLDG00000001835	tarbp2	100	91.594	Seriola_lalandi_dorsalis
ENSPLAG00000017659	tarbp2	76	68.159	ENSSARG00000001010	TARBP2	73	68.159	Sorex_araneus
ENSPLAG00000017659	tarbp2	99	52.478	ENSSPUG00000005895	TARBP2	98	53.179	Sphenodon_punctatus
ENSPLAG00000017659	tarbp2	100	93.333	ENSSPAG00000022797	tarbp2	100	93.333	Stegastes_partitus
ENSPLAG00000017659	tarbp2	100	65.847	ENSSSCG00000000276	TARBP2	100	68.406	Sus_scrofa
ENSPLAG00000017659	tarbp2	71	56.604	ENSTGUG00000017031	TARBP2	100	56.604	Taeniopygia_guttata
ENSPLAG00000017659	tarbp2	100	90.435	ENSTRUG00000014379	tarbp2	100	90.435	Takifugu_rubripes
ENSPLAG00000017659	tarbp2	100	90.145	ENSTNIG00000007065	tarbp2	100	90.145	Tetraodon_nigroviridis
ENSPLAG00000017659	tarbp2	100	66.120	ENSTTRG00000017177	TARBP2	100	66.940	Tursiops_truncatus
ENSPLAG00000017659	tarbp2	100	66.120	ENSUAMG00000009011	TARBP2	100	66.940	Ursus_americanus
ENSPLAG00000017659	tarbp2	100	65.574	ENSUMAG00000010461	TARBP2	100	66.393	Ursus_maritimus
ENSPLAG00000017659	tarbp2	100	65.847	ENSVVUG00000028150	TARBP2	100	68.696	Vulpes_vulpes
ENSPLAG00000017659	tarbp2	97	70.520	ENSXETG00000012644	tarbp2	97	70.520	Xenopus_tropicalis
ENSPLAG00000017659	tarbp2	100	98.261	ENSXMAG00000017836	tarbp2	100	98.261	Xiphophorus_maculatus