EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000017663 (Gene tree)
Gene ID: 106954101
Gene Symbol: rtcb
Alias: -
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4096 bases
Position: chrKQ545943.1:164510-168605
Accession: 106954101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000014061	RtcB	PF01139.17	5.5e-147	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000022236	-	1784	XM_015043347	ENSPLAP00000014061	505 (aa)	XP_014898833	UPI00072E84B2

Gene Model

Click here to download ENSPLAG00000017663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000017663's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000017663	rtcb	100	95.050	ENSG00000100220	RTCB	100	95.050	Homo_sapiens
ENSPLAG00000017663	rtcb	100	97.624	ENSAPOG00000006040	rtcb	100	97.624	Acanthochromis_polyacanthus
ENSPLAG00000017663	rtcb	100	95.050	ENSAMEG00000016152	RTCB	100	95.050	Ailuropoda_melanoleuca
ENSPLAG00000017663	rtcb	100	92.871	ENSACIG00000009083	rtcb	100	92.871	Amphilophus_citrinellus
ENSPLAG00000017663	rtcb	100	97.624	ENSAOCG00000005662	rtcb	100	98.696	Amphiprion_ocellaris
ENSPLAG00000017663	rtcb	100	97.624	ENSAPEG00000024701	rtcb	100	97.624	Amphiprion_percula
ENSPLAG00000017663	rtcb	96	93.018	ENSAPEG00000024653	rtcb	100	93.018	Amphiprion_percula
ENSPLAG00000017663	rtcb	100	97.228	ENSATEG00000000618	rtcb	100	97.228	Anabas_testudineus
ENSPLAG00000017663	rtcb	100	91.715	ENSACAG00000014817	RTCB	100	91.715	Anolis_carolinensis
ENSPLAG00000017663	rtcb	72	97.222	ENSANAG00000023724	-	84	97.222	Aotus_nancymaae
ENSPLAG00000017663	rtcb	100	80.594	ENSANAG00000018191	-	91	80.594	Aotus_nancymaae
ENSPLAG00000017663	rtcb	100	96.238	ENSACLG00000008367	rtcb	100	96.739	Astatotilapia_calliptera
ENSPLAG00000017663	rtcb	100	95.644	ENSAMXG00000042320	rtcb	100	95.644	Astyanax_mexicanus
ENSPLAG00000017663	rtcb	100	95.248	ENSBTAG00000011070	RTCB	100	95.248	Bos_taurus
ENSPLAG00000017663	rtcb	100	74.653	WBGene00008877	rtcb-1	100	74.653	Caenorhabditis_elegans
ENSPLAG00000017663	rtcb	100	94.851	ENSCJAG00000006128	RTCB	100	94.851	Callithrix_jacchus
ENSPLAG00000017663	rtcb	100	90.891	ENSCAFG00000010789	-	100	90.891	Canis_familiaris
ENSPLAG00000017663	rtcb	100	95.050	ENSCAFG00000001785	RTCB	100	95.050	Canis_familiaris
ENSPLAG00000017663	rtcb	87	90.909	ENSCAFG00020018953	-	99	90.909	Canis_lupus_dingo
ENSPLAG00000017663	rtcb	100	95.050	ENSCAFG00020004890	-	100	95.050	Canis_lupus_dingo
ENSPLAG00000017663	rtcb	100	95.248	ENSCHIG00000027009	-	100	95.248	Capra_hircus
ENSPLAG00000017663	rtcb	100	94.653	ENSTSYG00000012320	RTCB	100	94.653	Carlito_syrichta
ENSPLAG00000017663	rtcb	94	94.969	ENSCAPG00000011647	RTCB	96	94.969	Cavia_aperea
ENSPLAG00000017663	rtcb	100	94.851	ENSCCAG00000000618	RTCB	100	94.851	Cebus_capucinus
ENSPLAG00000017663	rtcb	100	94.851	ENSCATG00000033424	RTCB	100	94.851	Cercocebus_atys
ENSPLAG00000017663	rtcb	100	95.050	ENSCLAG00000007997	RTCB	100	95.050	Chinchilla_lanigera
ENSPLAG00000017663	rtcb	100	94.653	ENSCSAG00000008351	RTCB	100	94.653	Chlorocebus_sabaeus
ENSPLAG00000017663	rtcb	100	81.188	ENSCHOG00000009123	RTCB	100	81.188	Choloepus_hoffmanni
ENSPLAG00000017663	rtcb	100	93.861	ENSCPBG00000023184	RTCB	100	93.861	Chrysemys_picta_bellii
ENSPLAG00000017663	rtcb	100	82.970	ENSCING00000003830	-	100	82.970	Ciona_intestinalis
ENSPLAG00000017663	rtcb	100	83.168	ENSCSAVG00000008124	-	99	83.168	Ciona_savignyi
ENSPLAG00000017663	rtcb	100	91.089	ENSCANG00000001891	RTCB	100	91.089	Colobus_angolensis_palliatus
ENSPLAG00000017663	rtcb	100	94.653	ENSCGRG00001011173	Rtcb	100	94.653	Cricetulus_griseus_chok1gshd
ENSPLAG00000017663	rtcb	99	90.258	ENSCGRG00000009587	-	99	90.258	Cricetulus_griseus_crigri
ENSPLAG00000017663	rtcb	100	96.238	ENSCSEG00000003986	rtcb	100	96.238	Cynoglossus_semilaevis
ENSPLAG00000017663	rtcb	82	97.596	ENSCVAG00000000569	rtcb	95	97.596	Cyprinodon_variegatus
ENSPLAG00000017663	rtcb	100	96.238	ENSDARG00000101047	rtcb	100	96.238	Danio_rerio
ENSPLAG00000017663	rtcb	80	90.909	ENSDNOG00000012425	RTCB	99	90.909	Dasypus_novemcinctus
ENSPLAG00000017663	rtcb	100	94.455	ENSDORG00000010855	Rtcb	100	94.455	Dipodomys_ordii
ENSPLAG00000017663	rtcb	99	85.288	FBgn0032781	RtcB	99	85.288	Drosophila_melanogaster
ENSPLAG00000017663	rtcb	100	88.911	ENSETEG00000001988	RTCB	100	88.911	Echinops_telfairi
ENSPLAG00000017663	rtcb	100	86.337	ENSEBUG00000014235	rtcb	100	86.337	Eptatretus_burgeri
ENSPLAG00000017663	rtcb	100	94.851	ENSEASG00005019059	RTCB	100	94.851	Equus_asinus_asinus
ENSPLAG00000017663	rtcb	100	94.851	ENSECAG00000023998	RTCB	100	94.851	Equus_caballus
ENSPLAG00000017663	rtcb	88	86.323	ENSEEUG00000006251	RTCB	99	86.323	Erinaceus_europaeus
ENSPLAG00000017663	rtcb	100	83.176	ENSELUG00000009275	rtcb	100	83.176	Esox_lucius
ENSPLAG00000017663	rtcb	100	95.050	ENSFCAG00000026480	RTCB	100	95.050	Felis_catus
ENSPLAG00000017663	rtcb	100	94.653	ENSFALG00000013334	RTCB	100	94.653	Ficedula_albicollis
ENSPLAG00000017663	rtcb	100	94.851	ENSFDAG00000018150	RTCB	100	94.851	Fukomys_damarensis
ENSPLAG00000017663	rtcb	100	98.416	ENSFHEG00000009595	rtcb	100	98.416	Fundulus_heteroclitus
ENSPLAG00000017663	rtcb	100	92.871	ENSGMOG00000018882	rtcb	100	92.871	Gadus_morhua
ENSPLAG00000017663	rtcb	100	94.455	ENSGALG00000012611	RTCB	100	94.455	Gallus_gallus
ENSPLAG00000017663	rtcb	100	99.406	ENSGAFG00000004198	rtcb	100	99.406	Gambusia_affinis
ENSPLAG00000017663	rtcb	100	95.644	ENSGACG00000000586	rtcb	100	95.644	Gasterosteus_aculeatus
ENSPLAG00000017663	rtcb	93	93.404	ENSGAGG00000019133	RTCB	98	93.404	Gopherus_agassizii
ENSPLAG00000017663	rtcb	100	95.050	ENSGGOG00000011402	RTCB	100	95.050	Gorilla_gorilla
ENSPLAG00000017663	rtcb	100	96.238	ENSHBUG00000020571	rtcb	100	96.238	Haplochromis_burtoni
ENSPLAG00000017663	rtcb	100	94.851	ENSHGLG00000004492	RTCB	100	94.851	Heterocephalus_glaber_female
ENSPLAG00000017663	rtcb	93	67.797	ENSHGLG00000001066	-	99	67.797	Heterocephalus_glaber_female
ENSPLAG00000017663	rtcb	100	94.851	ENSHGLG00100008965	RTCB	100	94.851	Heterocephalus_glaber_male
ENSPLAG00000017663	rtcb	100	93.688	ENSHCOG00000006450	rtcb	100	93.688	Hippocampus_comes
ENSPLAG00000017663	rtcb	100	95.248	ENSIPUG00000015443	rtcb	100	95.248	Ictalurus_punctatus
ENSPLAG00000017663	rtcb	100	94.851	ENSSTOG00000003878	RTCB	100	94.851	Ictidomys_tridecemlineatus
ENSPLAG00000017663	rtcb	100	94.653	ENSJJAG00000010667	Rtcb	100	94.653	Jaculus_jaculus
ENSPLAG00000017663	rtcb	100	97.426	ENSKMAG00000013178	rtcb	100	97.426	Kryptolebias_marmoratus
ENSPLAG00000017663	rtcb	100	95.446	ENSLBEG00000000214	rtcb	100	95.446	Labrus_bergylta
ENSPLAG00000017663	rtcb	100	96.634	ENSLBEG00000010566	RTCB	100	96.634	Labrus_bergylta
ENSPLAG00000017663	rtcb	100	94.851	ENSLACG00000013033	RTCB	100	94.851	Latimeria_chalumnae
ENSPLAG00000017663	rtcb	100	95.644	ENSLOCG00000016515	rtcb	99	95.644	Lepisosteus_oculatus
ENSPLAG00000017663	rtcb	100	94.257	ENSLAFG00000002082	RTCB	100	94.257	Loxodonta_africana
ENSPLAG00000017663	rtcb	100	94.653	ENSMFAG00000034419	RTCB	100	94.653	Macaca_fascicularis
ENSPLAG00000017663	rtcb	100	94.653	ENSMMUG00000006720	RTCB	100	94.653	Macaca_mulatta
ENSPLAG00000017663	rtcb	100	94.653	ENSMNEG00000040669	RTCB	100	94.653	Macaca_nemestrina
ENSPLAG00000017663	rtcb	100	94.851	ENSMLEG00000040505	RTCB	100	94.851	Mandrillus_leucophaeus
ENSPLAG00000017663	rtcb	100	97.228	ENSMAMG00000020676	rtcb	100	97.228	Mastacembelus_armatus
ENSPLAG00000017663	rtcb	100	96.238	ENSMZEG00005018942	rtcb	100	96.238	Maylandia_zebra
ENSPLAG00000017663	rtcb	100	94.083	ENSMGAG00000012805	RTCB	100	94.083	Meleagris_gallopavo
ENSPLAG00000017663	rtcb	60	100.000	ENSMAUG00000008301	Rtcb	100	100.000	Mesocricetus_auratus
ENSPLAG00000017663	rtcb	100	75.644	ENSMICG00000036677	-	100	75.644	Microcebus_murinus
ENSPLAG00000017663	rtcb	100	94.851	ENSMICG00000013303	-	100	94.851	Microcebus_murinus
ENSPLAG00000017663	rtcb	100	94.653	ENSMOCG00000002440	Rtcb	100	94.653	Microtus_ochrogaster
ENSPLAG00000017663	rtcb	100	96.634	ENSMMOG00000005987	rtcb	100	96.634	Mola_mola
ENSPLAG00000017663	rtcb	100	94.455	ENSMODG00000001414	RTCB	100	94.455	Monodelphis_domestica
ENSPLAG00000017663	rtcb	100	97.030	ENSMALG00000007603	rtcb	100	97.030	Monopterus_albus
ENSPLAG00000017663	rtcb	100	94.653	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.653	Mus_caroli
ENSPLAG00000017663	rtcb	100	94.653	ENSMUSG00000001783	Rtcb	100	94.653	Mus_musculus
ENSPLAG00000017663	rtcb	100	94.653	MGP_PahariEiJ_G0031396	Rtcb	100	94.653	Mus_pahari
ENSPLAG00000017663	rtcb	100	94.653	MGP_SPRETEiJ_G0016507	Rtcb	100	94.653	Mus_spretus
ENSPLAG00000017663	rtcb	100	95.050	ENSMPUG00000012285	RTCB	100	95.050	Mustela_putorius_furo
ENSPLAG00000017663	rtcb	100	92.110	ENSMLUG00000007803	RTCB	100	92.110	Myotis_lucifugus
ENSPLAG00000017663	rtcb	72	100.000	ENSNGAG00000005093	Rtcb	100	100.000	Nannospalax_galili
ENSPLAG00000017663	rtcb	100	96.436	ENSNBRG00000017202	rtcb	100	96.436	Neolamprologus_brichardi
ENSPLAG00000017663	rtcb	100	95.050	ENSNLEG00000004960	RTCB	100	95.050	Nomascus_leucogenys
ENSPLAG00000017663	rtcb	100	70.693	ENSMEUG00000007809	-	100	70.693	Notamacropus_eugenii
ENSPLAG00000017663	rtcb	73	100.000	ENSOPRG00000003488	RTCB	79	100.000	Ochotona_princeps
ENSPLAG00000017663	rtcb	82	100.000	ENSODEG00000013033	-	100	100.000	Octodon_degus
ENSPLAG00000017663	rtcb	100	63.168	ENSODEG00000005042	-	100	63.168	Octodon_degus
ENSPLAG00000017663	rtcb	100	97.030	ENSONIG00000007474	rtcb	100	97.030	Oreochromis_niloticus
ENSPLAG00000017663	rtcb	100	94.257	ENSOANG00000005524	RTCB	100	94.257	Ornithorhynchus_anatinus
ENSPLAG00000017663	rtcb	93	94.681	ENSOCUG00000008270	RTCB	96	94.681	Oryctolagus_cuniculus
ENSPLAG00000017663	rtcb	100	97.030	ENSORLG00000020093	rtcb	100	97.030	Oryzias_latipes
ENSPLAG00000017663	rtcb	100	97.030	ENSORLG00020003706	rtcb	100	97.030	Oryzias_latipes_hni
ENSPLAG00000017663	rtcb	100	97.228	ENSORLG00015002968	rtcb	100	97.228	Oryzias_latipes_hsok
ENSPLAG00000017663	rtcb	100	96.634	ENSOMEG00000021278	rtcb	100	96.634	Oryzias_melastigma
ENSPLAG00000017663	rtcb	100	94.257	ENSOGAG00000001425	RTCB	100	94.257	Otolemur_garnettii
ENSPLAG00000017663	rtcb	100	95.248	ENSOARG00000018008	RTCB	100	95.248	Ovis_aries
ENSPLAG00000017663	rtcb	100	95.050	ENSPPAG00000028667	RTCB	100	95.050	Pan_paniscus
ENSPLAG00000017663	rtcb	100	95.050	ENSPPRG00000004038	RTCB	100	95.050	Panthera_pardus
ENSPLAG00000017663	rtcb	94	91.158	ENSPTIG00000020499	RTCB	97	92.211	Panthera_tigris_altaica
ENSPLAG00000017663	rtcb	100	95.050	ENSPTRG00000014287	RTCB	100	95.050	Pan_troglodytes
ENSPLAG00000017663	rtcb	100	94.653	ENSPANG00000016035	RTCB	100	94.653	Papio_anubis
ENSPLAG00000017663	rtcb	100	94.851	ENSPKIG00000001881	rtcb	100	94.851	Paramormyrops_kingsleyae
ENSPLAG00000017663	rtcb	91	95.000	ENSPSIG00000011690	RTCB	100	95.000	Pelodiscus_sinensis
ENSPLAG00000017663	rtcb	100	96.436	ENSPMGG00000016672	rtcb	100	96.436	Periophthalmus_magnuspinnatus
ENSPLAG00000017663	rtcb	100	94.653	ENSPEMG00000019548	Rtcb	100	94.653	Peromyscus_maniculatus_bairdii
ENSPLAG00000017663	rtcb	100	91.683	ENSPMAG00000005657	rtcb	100	91.683	Petromyzon_marinus
ENSPLAG00000017663	rtcb	100	94.455	ENSPCIG00000009467	RTCB	100	94.455	Phascolarctos_cinereus
ENSPLAG00000017663	rtcb	100	99.802	ENSPFOG00000003058	rtcb	100	99.802	Poecilia_formosa
ENSPLAG00000017663	rtcb	100	99.802	ENSPMEG00000006227	rtcb	100	99.802	Poecilia_mexicana
ENSPLAG00000017663	rtcb	100	99.406	ENSPREG00000018467	rtcb	100	99.406	Poecilia_reticulata
ENSPLAG00000017663	rtcb	100	95.050	ENSPPYG00000011752	RTCB	100	95.050	Pongo_abelii
ENSPLAG00000017663	rtcb	93	77.966	ENSPCAG00000013641	RTCB	100	77.966	Procavia_capensis
ENSPLAG00000017663	rtcb	100	94.851	ENSPCOG00000017243	RTCB	100	94.851	Propithecus_coquereli
ENSPLAG00000017663	rtcb	93	93.830	ENSPVAG00000002380	RTCB	100	93.830	Pteropus_vampyrus
ENSPLAG00000017663	rtcb	100	96.238	ENSPNYG00000022760	rtcb	100	96.238	Pundamilia_nyererei
ENSPLAG00000017663	rtcb	100	96.238	ENSPNAG00000009209	rtcb	100	96.238	Pygocentrus_nattereri
ENSPLAG00000017663	rtcb	100	94.653	ENSRNOG00000004813	Rtcb	100	94.653	Rattus_norvegicus
ENSPLAG00000017663	rtcb	100	86.759	ENSRBIG00000042090	RTCB	100	86.759	Rhinopithecus_bieti
ENSPLAG00000017663	rtcb	100	90.099	ENSSBOG00000020085	-	100	90.099	Saimiri_boliviensis_boliviensis
ENSPLAG00000017663	rtcb	94	95.781	ENSSHAG00000016277	RTCB	100	95.781	Sarcophilus_harrisii
ENSPLAG00000017663	rtcb	100	93.861	ENSSFOG00015011572	RTCB	100	93.861	Scleropages_formosus
ENSPLAG00000017663	rtcb	100	95.446	ENSSFOG00015000763	rtcb	100	95.446	Scleropages_formosus
ENSPLAG00000017663	rtcb	100	93.465	ENSSMAG00000005096	rtcb	100	93.465	Scophthalmus_maximus
ENSPLAG00000017663	rtcb	100	96.040	ENSSDUG00000012605	rtcb	100	96.040	Seriola_dumerili
ENSPLAG00000017663	rtcb	100	96.040	ENSSLDG00000019458	rtcb	100	96.040	Seriola_lalandi_dorsalis
ENSPLAG00000017663	rtcb	66	100.000	ENSSARG00000004799	-	70	100.000	Sorex_araneus
ENSPLAG00000017663	rtcb	100	93.861	ENSSPUG00000012814	RTCB	100	93.861	Sphenodon_punctatus
ENSPLAG00000017663	rtcb	100	97.624	ENSSPAG00000004623	rtcb	100	97.624	Stegastes_partitus
ENSPLAG00000017663	rtcb	100	95.050	ENSSSCG00000000158	RTCB	100	95.050	Sus_scrofa
ENSPLAG00000017663	rtcb	100	94.653	ENSTGUG00000010947	RTCB	99	94.653	Taeniopygia_guttata
ENSPLAG00000017663	rtcb	91	97.391	ENSTRUG00000009880	rtcb	100	97.391	Takifugu_rubripes
ENSPLAG00000017663	rtcb	100	94.851	ENSTNIG00000002484	rtcb	100	94.851	Tetraodon_nigroviridis
ENSPLAG00000017663	rtcb	100	81.584	ENSTBEG00000004418	RTCB	100	81.584	Tupaia_belangeri
ENSPLAG00000017663	rtcb	93	94.255	ENSTTRG00000006417	RTCB	100	94.255	Tursiops_truncatus
ENSPLAG00000017663	rtcb	100	95.050	ENSUAMG00000022792	RTCB	100	95.050	Ursus_americanus
ENSPLAG00000017663	rtcb	100	95.050	ENSUMAG00000017225	RTCB	100	95.050	Ursus_maritimus
ENSPLAG00000017663	rtcb	100	94.851	ENSVPAG00000005375	RTCB	100	94.851	Vicugna_pacos
ENSPLAG00000017663	rtcb	100	95.050	ENSVVUG00000023408	RTCB	100	95.577	Vulpes_vulpes
ENSPLAG00000017663	rtcb	100	93.465	ENSXETG00000011523	rtcb	100	93.465	Xenopus_tropicalis
ENSPLAG00000017663	rtcb	100	99.406	ENSXMAG00000002855	rtcb	100	99.406	Xiphophorus_maculatus