EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000017680 (Gene tree)
Gene ID: 106943401
Gene Symbol: csde1
Alias: -
Full Name: cold shock domain containing E1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 11227 bases
Position: chrKQ550148.1:4870-16096
Accession: 106943401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000028342	CSD	PF00313.22	2.1e-60	1	4
ENSPLAP00000028342	CSD	PF00313.22	2.1e-60	2	4
ENSPLAP00000028342	CSD	PF00313.22	2.1e-60	3	4
ENSPLAP00000028342	CSD	PF00313.22	2.1e-60	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000022230	-	2028	XM_015026716	ENSPLAP00000028342	675 (aa)	XP_014882202	-

Gene Model

Click here to download ENSPLAG00000017680's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000017680's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000017680	csde1	93	71.275	ENSG00000009307	CSDE1	96	77.311	Homo_sapiens
ENSPLAG00000017680	csde1	93	85.561	ENSAPOG00000015538	csde1	95	85.561	Acanthochromis_polyacanthus
ENSPLAG00000017680	csde1	93	70.661	ENSAMEG00000017129	CSDE1	91	70.661	Ailuropoda_melanoleuca
ENSPLAG00000017680	csde1	84	81.622	ENSACIG00000015175	csde1	100	81.622	Amphilophus_citrinellus
ENSPLAG00000017680	csde1	93	85.561	ENSAOCG00000011510	csde1	95	85.561	Amphiprion_ocellaris
ENSPLAG00000017680	csde1	93	85.561	ENSAPEG00000007194	csde1	95	85.561	Amphiprion_percula
ENSPLAG00000017680	csde1	93	84.178	ENSATEG00000003864	csde1	95	84.178	Anabas_testudineus
ENSPLAG00000017680	csde1	93	73.425	ENSAPLG00000008797	CSDE1	97	73.425	Anas_platyrhynchos
ENSPLAG00000017680	csde1	93	74.540	ENSACAG00000003120	CSDE1	97	74.540	Anolis_carolinensis
ENSPLAG00000017680	csde1	88	56.391	ENSANAG00000028396	-	90	56.391	Aotus_nancymaae
ENSPLAG00000017680	csde1	93	71.121	ENSANAG00000024665	CSDE1	93	71.121	Aotus_nancymaae
ENSPLAG00000017680	csde1	93	84.946	ENSACLG00000013296	csde1	95	84.946	Astatotilapia_calliptera
ENSPLAG00000017680	csde1	93	81.164	ENSAMXG00000007436	csde1	95	81.164	Astyanax_mexicanus
ENSPLAG00000017680	csde1	93	70.661	ENSBTAG00000000678	CSDE1	97	70.661	Bos_taurus
ENSPLAG00000017680	csde1	93	71.121	ENSCJAG00000012565	CSDE1	92	71.121	Callithrix_jacchus
ENSPLAG00000017680	csde1	93	71.275	ENSCAFG00000009618	CSDE1	93	71.275	Canis_familiaris
ENSPLAG00000017680	csde1	93	71.275	ENSCAFG00020000481	CSDE1	97	71.275	Canis_lupus_dingo
ENSPLAG00000017680	csde1	93	70.814	ENSCHIG00000017250	CSDE1	97	70.814	Capra_hircus
ENSPLAG00000017680	csde1	93	73.041	ENSTSYG00000003747	CSDE1	96	73.041	Carlito_syrichta
ENSPLAG00000017680	csde1	93	52.848	ENSCAPG00000015128	CSDE1	94	52.848	Cavia_aperea
ENSPLAG00000017680	csde1	93	66.923	ENSCPOG00000040388	CSDE1	97	66.923	Cavia_porcellus
ENSPLAG00000017680	csde1	93	73.041	ENSCCAG00000036794	CSDE1	96	73.041	Cebus_capucinus
ENSPLAG00000017680	csde1	93	53.670	ENSCCAG00000030878	-	88	53.670	Cebus_capucinus
ENSPLAG00000017680	csde1	92	55.213	ENSCCAG00000033677	-	99	55.213	Cebus_capucinus
ENSPLAG00000017680	csde1	93	71.921	ENSCATG00000036962	CSDE1	94	71.921	Cercocebus_atys
ENSPLAG00000017680	csde1	93	71.429	ENSCLAG00000006618	CSDE1	97	71.429	Chinchilla_lanigera
ENSPLAG00000017680	csde1	93	71.275	ENSCSAG00000001658	CSDE1	92	71.275	Chlorocebus_sabaeus
ENSPLAG00000017680	csde1	87	71.242	ENSCHOG00000000918	CSDE1	63	71.242	Choloepus_hoffmanni
ENSPLAG00000017680	csde1	93	74.080	ENSCPBG00000016547	CSDE1	97	74.080	Chrysemys_picta_bellii
ENSPLAG00000017680	csde1	96	39.385	ENSCING00000014465	-	95	39.385	Ciona_intestinalis
ENSPLAG00000017680	csde1	93	39.602	ENSCSAVG00000008100	-	99	39.602	Ciona_savignyi
ENSPLAG00000017680	csde1	93	71.921	ENSCANG00000035096	CSDE1	94	71.921	Colobus_angolensis_palliatus
ENSPLAG00000017680	csde1	93	64.220	ENSCANG00000031069	-	93	67.293	Colobus_angolensis_palliatus
ENSPLAG00000017680	csde1	93	70.661	ENSCGRG00001016833	-	97	70.661	Cricetulus_griseus_chok1gshd
ENSPLAG00000017680	csde1	93	57.656	ENSCGRG00001014011	-	97	57.656	Cricetulus_griseus_chok1gshd
ENSPLAG00000017680	csde1	93	53.577	ENSCGRG00000005831	-	96	53.577	Cricetulus_griseus_crigri
ENSPLAG00000017680	csde1	93	72.581	ENSCGRG00000002225	-	96	72.581	Cricetulus_griseus_crigri
ENSPLAG00000017680	csde1	93	82.975	ENSCSEG00000002620	csde1	95	82.949	Cynoglossus_semilaevis
ENSPLAG00000017680	csde1	93	90.476	ENSCVAG00000001344	csde1	95	90.476	Cyprinodon_variegatus
ENSPLAG00000017680	csde1	87	88.350	ENSDARG00000074758	csde1	95	88.350	Danio_rerio
ENSPLAG00000017680	csde1	93	71.472	ENSDNOG00000010287	-	90	71.472	Dasypus_novemcinctus
ENSPLAG00000017680	csde1	93	71.121	ENSDORG00000011609	Csde1	97	71.121	Dipodomys_ordii
ENSPLAG00000017680	csde1	95	45.455	FBgn0263352	Unr	83	45.226	Drosophila_melanogaster
ENSPLAG00000017680	csde1	93	71.875	ENSETEG00000002491	-	55	70.997	Echinops_telfairi
ENSPLAG00000017680	csde1	85	49.661	ENSETEG00000007109	-	97	49.661	Echinops_telfairi
ENSPLAG00000017680	csde1	84	60.943	ENSETEG00000006280	-	99	60.943	Echinops_telfairi
ENSPLAG00000017680	csde1	93	55.146	ENSETEG00000013678	-	94	55.146	Echinops_telfairi
ENSPLAG00000017680	csde1	97	50.210	ENSEBUG00000008647	csde1	98	50.210	Eptatretus_burgeri
ENSPLAG00000017680	csde1	93	71.429	ENSEASG00005006284	CSDE1	97	71.429	Equus_asinus_asinus
ENSPLAG00000017680	csde1	93	71.429	ENSECAG00000020885	CSDE1	97	71.429	Equus_caballus
ENSPLAG00000017680	csde1	87	71.728	ENSEEUG00000006286	CSDE1	67	71.728	Erinaceus_europaeus
ENSPLAG00000017680	csde1	93	80.303	ENSELUG00000015507	csde1	95	78.321	Esox_lucius
ENSPLAG00000017680	csde1	93	71.429	ENSFCAG00000029266	CSDE1	97	71.429	Felis_catus
ENSPLAG00000017680	csde1	93	74.080	ENSFALG00000003407	CSDE1	97	74.080	Ficedula_albicollis
ENSPLAG00000017680	csde1	93	70.814	ENSFDAG00000007882	CSDE1	97	70.814	Fukomys_damarensis
ENSPLAG00000017680	csde1	93	91.091	ENSFHEG00000010799	csde1	96	91.091	Fundulus_heteroclitus
ENSPLAG00000017680	csde1	93	81.288	ENSGMOG00000012731	csde1	95	81.288	Gadus_morhua
ENSPLAG00000017680	csde1	93	73.313	ENSGALG00000002139	CSDE1	97	73.313	Gallus_gallus
ENSPLAG00000017680	csde1	87	91.486	ENSGAFG00000005241	csde1	92	91.486	Gambusia_affinis
ENSPLAG00000017680	csde1	93	84.946	ENSGACG00000004544	csde1	95	84.946	Gasterosteus_aculeatus
ENSPLAG00000017680	csde1	93	73.773	ENSGAGG00000017685	CSDE1	97	73.773	Gopherus_agassizii
ENSPLAG00000017680	csde1	93	71.275	ENSGGOG00000002164	CSDE1	99	71.210	Gorilla_gorilla
ENSPLAG00000017680	csde1	93	84.946	ENSHBUG00000020315	csde1	95	84.946	Haplochromis_burtoni
ENSPLAG00000017680	csde1	93	62.519	ENSHGLG00000003829	-	97	62.519	Heterocephalus_glaber_female
ENSPLAG00000017680	csde1	93	59.322	ENSHGLG00000019549	-	97	59.322	Heterocephalus_glaber_female
ENSPLAG00000017680	csde1	93	57.075	ENSHGLG00000000650	-	97	57.075	Heterocephalus_glaber_female
ENSPLAG00000017680	csde1	93	62.673	ENSHGLG00000009620	-	97	63.134	Heterocephalus_glaber_female
ENSPLAG00000017680	csde1	93	65.312	ENSHGLG00000008555	-	97	65.312	Heterocephalus_glaber_female
ENSPLAG00000017680	csde1	93	65.207	ENSHGLG00000010039	-	96	65.207	Heterocephalus_glaber_female
ENSPLAG00000017680	csde1	93	62.154	ENSHGLG00000007471	-	96	62.154	Heterocephalus_glaber_female
ENSPLAG00000017680	csde1	93	64.977	ENSHGLG00100006910	-	96	64.977	Heterocephalus_glaber_male
ENSPLAG00000017680	csde1	88	61.322	ENSHGLG00100004195	-	86	61.322	Heterocephalus_glaber_male
ENSPLAG00000017680	csde1	93	57.525	ENSHGLG00100012072	-	97	57.296	Heterocephalus_glaber_male
ENSPLAG00000017680	csde1	92	59.908	ENSHGLG00100004833	-	96	59.908	Heterocephalus_glaber_male
ENSPLAG00000017680	csde1	93	61.621	ENSHGLG00100007287	-	96	61.621	Heterocephalus_glaber_male
ENSPLAG00000017680	csde1	93	60.903	ENSHGLG00100002245	-	97	60.903	Heterocephalus_glaber_male
ENSPLAG00000017680	csde1	95	57.984	ENSHGLG00100001846	-	97	57.984	Heterocephalus_glaber_male
ENSPLAG00000017680	csde1	93	71.121	ENSHGLG00100019438	-	97	71.121	Heterocephalus_glaber_male
ENSPLAG00000017680	csde1	93	84.332	ENSHCOG00000004158	csde1	95	84.332	Hippocampus_comes
ENSPLAG00000017680	csde1	93	79.939	ENSIPUG00000000355	csde1	95	79.939	Ictalurus_punctatus
ENSPLAG00000017680	csde1	93	59.231	ENSSTOG00000030994	-	93	59.231	Ictidomys_tridecemlineatus
ENSPLAG00000017680	csde1	84	60.839	ENSSTOG00000032722	-	98	60.839	Ictidomys_tridecemlineatus
ENSPLAG00000017680	csde1	93	70.814	ENSJJAG00000019571	Csde1	97	70.814	Jaculus_jaculus
ENSPLAG00000017680	csde1	93	89.223	ENSKMAG00000005685	csde1	95	89.223	Kryptolebias_marmoratus
ENSPLAG00000017680	csde1	93	85.561	ENSLBEG00000014770	csde1	95	85.561	Labrus_bergylta
ENSPLAG00000017680	csde1	93	71.515	ENSLACG00000018452	CSDE1	98	71.515	Latimeria_chalumnae
ENSPLAG00000017680	csde1	93	80.031	ENSLOCG00000010413	csde1	89	80.031	Lepisosteus_oculatus
ENSPLAG00000017680	csde1	93	70.968	ENSLAFG00000007150	CSDE1	93	70.968	Loxodonta_africana
ENSPLAG00000017680	csde1	93	71.921	ENSMFAG00000003674	CSDE1	97	71.275	Macaca_fascicularis
ENSPLAG00000017680	csde1	93	71.275	ENSMMUG00000001974	CSDE1	99	70.181	Macaca_mulatta
ENSPLAG00000017680	csde1	93	71.921	ENSMNEG00000045247	CSDE1	94	71.921	Macaca_nemestrina
ENSPLAG00000017680	csde1	93	70.968	ENSMLEG00000038673	CSDE1	92	70.968	Mandrillus_leucophaeus
ENSPLAG00000017680	csde1	93	85.714	ENSMAMG00000008821	csde1	95	85.714	Mastacembelus_armatus
ENSPLAG00000017680	csde1	93	84.946	ENSMZEG00005021675	csde1	95	84.946	Maylandia_zebra
ENSPLAG00000017680	csde1	93	73.466	ENSMGAG00000016381	CSDE1	97	73.466	Meleagris_gallopavo
ENSPLAG00000017680	csde1	93	70.661	ENSMAUG00000014031	Csde1	97	70.661	Mesocricetus_auratus
ENSPLAG00000017680	csde1	93	73.441	ENSMICG00000002050	CSDE1	96	73.441	Microcebus_murinus
ENSPLAG00000017680	csde1	93	70.814	ENSMOCG00000018960	Csde1	97	70.814	Microtus_ochrogaster
ENSPLAG00000017680	csde1	93	85.407	ENSMMOG00000015075	csde1	95	85.407	Mola_mola
ENSPLAG00000017680	csde1	93	72.811	ENSMODG00000004685	CSDE1	97	72.811	Monodelphis_domestica
ENSPLAG00000017680	csde1	93	84.946	ENSMALG00000007132	csde1	95	84.946	Monopterus_albus
ENSPLAG00000017680	csde1	93	70.814	MGP_CAROLIEiJ_G0025444	Csde1	97	85.437	Mus_caroli
ENSPLAG00000017680	csde1	93	70.968	ENSMUSG00000068823	Csde1	97	85.437	Mus_musculus
ENSPLAG00000017680	csde1	93	70.814	MGP_PahariEiJ_G0026888	Csde1	97	85.437	Mus_pahari
ENSPLAG00000017680	csde1	93	70.814	MGP_SPRETEiJ_G0026394	Csde1	97	85.437	Mus_spretus
ENSPLAG00000017680	csde1	93	71.363	ENSMPUG00000005753	CSDE1	99	71.363	Mustela_putorius_furo
ENSPLAG00000017680	csde1	93	71.077	ENSMLUG00000005681	CSDE1	92	71.121	Myotis_lucifugus
ENSPLAG00000017680	csde1	93	70.507	ENSNGAG00000021929	Csde1	97	70.507	Nannospalax_galili
ENSPLAG00000017680	csde1	93	51.843	ENSNGAG00000012599	-	96	51.843	Nannospalax_galili
ENSPLAG00000017680	csde1	93	84.946	ENSNBRG00000020808	csde1	95	84.946	Neolamprologus_brichardi
ENSPLAG00000017680	csde1	93	71.275	ENSNLEG00000004842	CSDE1	94	71.275	Nomascus_leucogenys
ENSPLAG00000017680	csde1	93	72.492	ENSMEUG00000002677	CSDE1	82	72.492	Notamacropus_eugenii
ENSPLAG00000017680	csde1	93	70.356	ENSOPRG00000005002	CSDE1	63	70.356	Ochotona_princeps
ENSPLAG00000017680	csde1	93	71.121	ENSODEG00000007383	-	97	71.121	Octodon_degus
ENSPLAG00000017680	csde1	92	52.174	ENSODEG00000005979	-	94	52.174	Octodon_degus
ENSPLAG00000017680	csde1	93	84.793	ENSONIG00000009309	csde1	95	84.793	Oreochromis_niloticus
ENSPLAG00000017680	csde1	93	86.364	ENSOANG00000003346	-	79	86.364	Ornithorhynchus_anatinus
ENSPLAG00000017680	csde1	93	70.814	ENSOCUG00000016438	CSDE1	92	70.814	Oryctolagus_cuniculus
ENSPLAG00000017680	csde1	93	83.871	ENSORLG00000000707	csde1	95	83.871	Oryzias_latipes
ENSPLAG00000017680	csde1	93	83.564	ENSORLG00020005148	csde1	95	83.564	Oryzias_latipes_hni
ENSPLAG00000017680	csde1	93	83.717	ENSORLG00015019415	csde1	95	83.717	Oryzias_latipes_hsok
ENSPLAG00000017680	csde1	93	82.796	ENSOMEG00000015656	csde1	95	83.717	Oryzias_melastigma
ENSPLAG00000017680	csde1	93	71.275	ENSOGAG00000012127	CSDE1	92	71.275	Otolemur_garnettii
ENSPLAG00000017680	csde1	93	70.814	ENSOARG00000020034	CSDE1	92	70.814	Ovis_aries
ENSPLAG00000017680	csde1	93	71.275	ENSPPAG00000025861	CSDE1	97	71.275	Pan_paniscus
ENSPLAG00000017680	csde1	93	71.429	ENSPPRG00000006747	CSDE1	92	71.429	Panthera_pardus
ENSPLAG00000017680	csde1	93	71.429	ENSPTIG00000015468	CSDE1	97	71.429	Panthera_tigris_altaica
ENSPLAG00000017680	csde1	94	71.231	ENSPTRG00000033721	CSDE1	98	71.231	Pan_troglodytes
ENSPLAG00000017680	csde1	93	71.275	ENSPANG00000018873	CSDE1	97	71.275	Papio_anubis
ENSPLAG00000017680	csde1	93	79.877	ENSPKIG00000009459	csde1	95	79.877	Paramormyrops_kingsleyae
ENSPLAG00000017680	csde1	91	72.188	ENSPSIG00000003823	CSDE1	94	72.188	Pelodiscus_sinensis
ENSPLAG00000017680	csde1	93	81.595	ENSPMGG00000000772	csde1	95	81.595	Periophthalmus_magnuspinnatus
ENSPLAG00000017680	csde1	93	70.814	ENSPEMG00000020357	-	97	70.814	Peromyscus_maniculatus_bairdii
ENSPLAG00000017680	csde1	93	72.965	ENSPCIG00000022587	CSDE1	97	72.965	Phascolarctos_cinereus
ENSPLAG00000017680	csde1	95	92.620	ENSPFOG00000012664	csde1	99	92.044	Poecilia_formosa
ENSPLAG00000017680	csde1	95	99.221	ENSPMEG00000005094	csde1	97	99.221	Poecilia_mexicana
ENSPLAG00000017680	csde1	93	91.908	ENSPREG00000011631	csde1	95	91.265	Poecilia_reticulata
ENSPLAG00000017680	csde1	93	71.121	ENSPPYG00000000996	CSDE1	97	71.121	Pongo_abelii
ENSPLAG00000017680	csde1	93	71.036	ENSPCAG00000014368	CSDE1	76	71.036	Procavia_capensis
ENSPLAG00000017680	csde1	93	72.441	ENSPCOG00000017893	CSDE1	99	72.441	Propithecus_coquereli
ENSPLAG00000017680	csde1	84	59.108	ENSPCOG00000008223	-	91	59.108	Propithecus_coquereli
ENSPLAG00000017680	csde1	87	70.016	ENSPVAG00000008225	CSDE1	86	70.016	Pteropus_vampyrus
ENSPLAG00000017680	csde1	93	84.946	ENSPNYG00000013745	csde1	95	84.946	Pundamilia_nyererei
ENSPLAG00000017680	csde1	93	82.083	ENSPNAG00000001958	csde1	95	82.083	Pygocentrus_nattereri
ENSPLAG00000017680	csde1	93	70.661	ENSRNOG00000061058	Csde1	97	70.661	Rattus_norvegicus
ENSPLAG00000017680	csde1	93	66.003	ENSRBIG00000038966	-	92	65.491	Rhinopithecus_bieti
ENSPLAG00000017680	csde1	93	71.838	ENSRBIG00000038088	-	96	71.838	Rhinopithecus_bieti
ENSPLAG00000017680	csde1	93	71.744	ENSRROG00000043101	CSDE1	95	71.744	Rhinopithecus_roxellana
ENSPLAG00000017680	csde1	93	71.121	ENSSBOG00000035592	CSDE1	92	71.121	Saimiri_boliviensis_boliviensis
ENSPLAG00000017680	csde1	93	72.965	ENSSHAG00000009831	CSDE1	97	72.965	Sarcophilus_harrisii
ENSPLAG00000017680	csde1	93	79.908	ENSSFOG00015007498	csde1	97	79.908	Scleropages_formosus
ENSPLAG00000017680	csde1	93	84.485	ENSSMAG00000007203	csde1	95	84.485	Scophthalmus_maximus
ENSPLAG00000017680	csde1	93	86.329	ENSSDUG00000015380	csde1	95	86.329	Seriola_dumerili
ENSPLAG00000017680	csde1	93	86.329	ENSSLDG00000008819	csde1	95	86.329	Seriola_lalandi_dorsalis
ENSPLAG00000017680	csde1	93	70.814	ENSSARG00000000738	CSDE1	91	70.814	Sorex_araneus
ENSPLAG00000017680	csde1	93	74.387	ENSSPUG00000008714	CSDE1	97	74.387	Sphenodon_punctatus
ENSPLAG00000017680	csde1	93	86.636	ENSSPAG00000000716	csde1	95	86.636	Stegastes_partitus
ENSPLAG00000017680	csde1	93	71.582	ENSSSCG00000006752	CSDE1	97	71.582	Sus_scrofa
ENSPLAG00000017680	csde1	93	73.089	ENSTGUG00000000972	CSDE1	97	73.089	Taeniopygia_guttata
ENSPLAG00000017680	csde1	93	78.955	ENSTRUG00000007996	csde1	95	78.955	Takifugu_rubripes
ENSPLAG00000017680	csde1	87	93.204	ENSTNIG00000010878	csde1	91	93.204	Tetraodon_nigroviridis
ENSPLAG00000017680	csde1	85	81.667	ENSTBEG00000011880	-	57	81.667	Tupaia_belangeri
ENSPLAG00000017680	csde1	93	70.968	ENSTTRG00000015583	CSDE1	92	70.968	Tursiops_truncatus
ENSPLAG00000017680	csde1	87	71.854	ENSUAMG00000021779	-	97	71.854	Ursus_americanus
ENSPLAG00000017680	csde1	84	66.437	ENSUAMG00000024289	-	99	66.437	Ursus_americanus
ENSPLAG00000017680	csde1	93	66.513	ENSUMAG00000009720	-	93	66.513	Ursus_maritimus
ENSPLAG00000017680	csde1	93	72.167	ENSUMAG00000011714	-	95	72.167	Ursus_maritimus
ENSPLAG00000017680	csde1	93	74.619	ENSVPAG00000000749	CSDE1	76	74.619	Vicugna_pacos
ENSPLAG00000017680	csde1	87	68.535	ENSVVUG00000009890	CSDE1	93	68.535	Vulpes_vulpes
ENSPLAG00000017680	csde1	93	72.171	ENSXETG00000021448	csde1	96	72.171	Xenopus_tropicalis
ENSPLAG00000017680	csde1	89	88.202	ENSXCOG00000000035	csde1	85	88.202	Xiphophorus_couchianus
ENSPLAG00000017680	csde1	96	90.896	ENSXMAG00000009080	csde1	97	90.896	Xiphophorus_maculatus