EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000017829 (Gene tree)
Gene ID: 106955473
Gene Symbol: SMARCA2
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 43196 bases
Position: chrKQ546053.1:205456-248651
Accession: 106955473
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000014115	ResIII	PF04851.15	1.6e-07	1	1
ENSPLAP00000028417	ResIII	PF04851.15	1.7e-07	1	1
ENSPLAP00000014115	BRK	PF07533.16	1.7e-17	1	1
ENSPLAP00000028417	BRK	PF07533.16	2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000022317	SMARCA2-201	4677	-	ENSPLAP00000014115	1558 (aa)	-	-
ENSPLAT00000030198	SMARCA2-202	5143	XM_015045682	ENSPLAP00000028417	1644 (aa)	XP_014901168	-

Gene Model

Click here to download ENSPLAG00000017829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000017829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000017829	SMARCA2	94	71.725	ENSPLAG00000014294	smarca4a	99	71.438
ENSPLAG00000017829	SMARCA2	81	75.557	ENSPLAG00000018616	-	98	71.703

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000017829	SMARCA2	96	77.505	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSPLAG00000017829	SMARCA2	96	91.461	ENSAPOG00000002641	SMARCA2	99	91.214	Acanthochromis_polyacanthus
ENSPLAG00000017829	SMARCA2	86	77.045	ENSAMEG00000012325	SMARCA2	98	85.669	Ailuropoda_melanoleuca
ENSPLAG00000017829	SMARCA2	98	89.111	ENSACIG00000015607	SMARCA2	99	89.052	Amphilophus_citrinellus
ENSPLAG00000017829	SMARCA2	96	91.846	ENSAOCG00000009647	-	99	91.593	Amphiprion_ocellaris
ENSPLAG00000017829	SMARCA2	96	91.461	ENSAPEG00000007646	SMARCA2	99	91.403	Amphiprion_percula
ENSPLAG00000017829	SMARCA2	97	91.609	ENSATEG00000006916	SMARCA2	99	91.359	Anabas_testudineus
ENSPLAG00000017829	SMARCA2	85	78.267	ENSAPLG00000013873	SMARCA2	93	77.970	Anas_platyrhynchos
ENSPLAG00000017829	SMARCA2	94	79.022	ENSACAG00000002423	SMARCA2	99	78.455	Anolis_carolinensis
ENSPLAG00000017829	SMARCA2	96	77.727	ENSANAG00000026498	SMARCA2	99	80.088	Aotus_nancymaae
ENSPLAG00000017829	SMARCA2	98	87.637	ENSACLG00000004248	SMARCA2	99	89.001	Astatotilapia_calliptera
ENSPLAG00000017829	SMARCA2	96	84.375	ENSAMXG00000012404	smarca2	99	84.010	Astyanax_mexicanus
ENSPLAG00000017829	SMARCA2	96	78.168	ENSBTAG00000007494	SMARCA2	99	79.575	Bos_taurus
ENSPLAG00000017829	SMARCA2	94	79.209	ENSCJAG00000010710	SMARCA2	99	80.376	Callithrix_jacchus
ENSPLAG00000017829	SMARCA2	96	77.872	ENSCAFG00000002013	SMARCA2	99	79.710	Canis_familiaris
ENSPLAG00000017829	SMARCA2	73	86.707	ENSCAFG00020026802	SMARCA2	94	86.510	Canis_lupus_dingo
ENSPLAG00000017829	SMARCA2	96	78.233	ENSCHIG00000025863	SMARCA2	99	79.639	Capra_hircus
ENSPLAG00000017829	SMARCA2	96	76.000	ENSTSYG00000003858	SMARCA2	99	80.655	Carlito_syrichta
ENSPLAG00000017829	SMARCA2	80	81.166	ENSCAPG00000002890	SMARCA2	99	77.421	Cavia_aperea
ENSPLAG00000017829	SMARCA2	82	81.245	ENSCPOG00000005475	SMARCA2	99	79.723	Cavia_porcellus
ENSPLAG00000017829	SMARCA2	96	77.778	ENSCCAG00000030636	SMARCA2	99	80.277	Cebus_capucinus
ENSPLAG00000017829	SMARCA2	87	80.347	ENSCATG00000031470	SMARCA2	99	79.987	Cercocebus_atys
ENSPLAG00000017829	SMARCA2	81	82.375	ENSCLAG00000014484	SMARCA2	99	80.025	Chinchilla_lanigera
ENSPLAG00000017829	SMARCA2	90	79.448	ENSCSAG00000008650	SMARCA2	99	80.902	Chlorocebus_sabaeus
ENSPLAG00000017829	SMARCA2	83	80.179	ENSCHOG00000004316	SMARCA2	86	82.097	Choloepus_hoffmanni
ENSPLAG00000017829	SMARCA2	94	81.427	ENSCPBG00000025463	SMARCA2	98	83.837	Chrysemys_picta_bellii
ENSPLAG00000017829	SMARCA2	96	78.058	ENSCANG00000039597	SMARCA2	99	80.403	Colobus_angolensis_palliatus
ENSPLAG00000017829	SMARCA2	77	79.493	ENSCGRG00001002323	Smarca2	99	73.400	Cricetulus_griseus_chok1gshd
ENSPLAG00000017829	SMARCA2	99	84.968	ENSCSEG00000019311	SMARCA2	99	84.459	Cynoglossus_semilaevis
ENSPLAG00000017829	SMARCA2	83	88.758	ENSCVAG00000016571	SMARCA2	98	87.406	Cyprinodon_variegatus
ENSPLAG00000017829	SMARCA2	98	81.174	ENSDARG00000008904	smarca2	99	82.737	Danio_rerio
ENSPLAG00000017829	SMARCA2	94	79.538	ENSDNOG00000006402	SMARCA2	99	80.290	Dasypus_novemcinctus
ENSPLAG00000017829	SMARCA2	81	82.312	ENSDORG00000014832	Smarca2	99	79.849	Dipodomys_ordii
ENSPLAG00000017829	SMARCA2	76	61.070	FBgn0000212	brm	83	56.957	Drosophila_melanogaster
ENSPLAG00000017829	SMARCA2	86	60.100	ENSEBUG00000002449	-	95	61.302	Eptatretus_burgeri
ENSPLAG00000017829	SMARCA2	94	70.448	ENSEBUG00000011442	-	97	69.656	Eptatretus_burgeri
ENSPLAG00000017829	SMARCA2	96	78.298	ENSEASG00005010312	SMARCA2	99	79.584	Equus_asinus_asinus
ENSPLAG00000017829	SMARCA2	60	91.176	ENSEEUG00000015540	-	69	79.730	Erinaceus_europaeus
ENSPLAG00000017829	SMARCA2	94	80.898	ENSELUG00000010318	smarca2	99	80.543	Esox_lucius
ENSPLAG00000017829	SMARCA2	95	78.164	ENSFCAG00000001568	SMARCA2	99	79.710	Felis_catus
ENSPLAG00000017829	SMARCA2	94	79.832	ENSFALG00000010416	SMARCA2	98	81.301	Ficedula_albicollis
ENSPLAG00000017829	SMARCA2	96	77.296	ENSFDAG00000010502	SMARCA2	99	79.076	Fukomys_damarensis
ENSPLAG00000017829	SMARCA2	96	96.010	ENSFHEG00000021250	SMARCA2	99	95.820	Fundulus_heteroclitus
ENSPLAG00000017829	SMARCA2	98	81.097	ENSGMOG00000014229	SMARCA2	99	80.651	Gadus_morhua
ENSPLAG00000017829	SMARCA2	94	79.961	ENSGALG00000010164	SMARCA2	99	79.849	Gallus_gallus
ENSPLAG00000017829	SMARCA2	94	88.456	ENSGAFG00000001164	SMARCA2	98	87.556	Gambusia_affinis
ENSPLAG00000017829	SMARCA2	96	86.512	ENSGACG00000014488	SMARCA2	99	86.136	Gasterosteus_aculeatus
ENSPLAG00000017829	SMARCA2	94	78.672	ENSGAGG00000024412	SMARCA2	99	79.585	Gopherus_agassizii
ENSPLAG00000017829	SMARCA2	85	86.244	ENSGGOG00000000513	SMARCA2	98	81.016	Gorilla_gorilla
ENSPLAG00000017829	SMARCA2	96	90.518	ENSHBUG00000006691	SMARCA2	99	90.777	Haplochromis_burtoni
ENSPLAG00000017829	SMARCA2	95	78.873	ENSHGLG00000005215	SMARCA2	99	79.526	Heterocephalus_glaber_female
ENSPLAG00000017829	SMARCA2	96	79.068	ENSHGLG00100010496	SMARCA2	99	79.710	Heterocephalus_glaber_male
ENSPLAG00000017829	SMARCA2	88	81.246	ENSHCOG00000015348	-	97	85.430	Hippocampus_comes
ENSPLAG00000017829	SMARCA2	96	83.125	ENSIPUG00000011060	smarca2	98	82.530	Ictalurus_punctatus
ENSPLAG00000017829	SMARCA2	80	83.663	ENSSTOG00000006812	SMARCA2	99	80.403	Ictidomys_tridecemlineatus
ENSPLAG00000017829	SMARCA2	96	77.799	ENSJJAG00000010867	Smarca2	99	79.159	Jaculus_jaculus
ENSPLAG00000017829	SMARCA2	96	93.114	ENSKMAG00000015844	-	99	93.114	Kryptolebias_marmoratus
ENSPLAG00000017829	SMARCA2	94	82.282	ENSLOCG00000011499	smarca2	99	81.666	Lepisosteus_oculatus
ENSPLAG00000017829	SMARCA2	94	79.615	ENSLAFG00000014061	SMARCA2	99	80.227	Loxodonta_africana
ENSPLAG00000017829	SMARCA2	80	82.233	ENSMFAG00000003814	SMARCA2	99	79.255	Macaca_fascicularis
ENSPLAG00000017829	SMARCA2	96	77.943	ENSMMUG00000015279	SMARCA2	99	80.340	Macaca_mulatta
ENSPLAG00000017829	SMARCA2	96	77.771	ENSMNEG00000041069	SMARCA2	99	80.126	Macaca_nemestrina
ENSPLAG00000017829	SMARCA2	96	77.497	ENSMLEG00000027418	SMARCA2	95	87.763	Mandrillus_leucophaeus
ENSPLAG00000017829	SMARCA2	96	92.235	ENSMAMG00000003056	SMARCA2	99	92.235	Mastacembelus_armatus
ENSPLAG00000017829	SMARCA2	96	90.645	ENSMZEG00005020709	SMARCA2	99	90.903	Maylandia_zebra
ENSPLAG00000017829	SMARCA2	72	68.792	ENSMGAG00000005160	-	100	67.995	Meleagris_gallopavo
ENSPLAG00000017829	SMARCA2	96	78.301	ENSMICG00000005162	SMARCA2	99	80.025	Microcebus_murinus
ENSPLAG00000017829	SMARCA2	96	77.527	ENSMOCG00000001611	Smarca2	99	79.610	Microtus_ochrogaster
ENSPLAG00000017829	SMARCA2	98	85.429	ENSMMOG00000014196	SMARCA2	99	85.226	Mola_mola
ENSPLAG00000017829	SMARCA2	94	79.745	ENSMODG00000003578	SMARCA2	99	80.214	Monodelphis_domestica
ENSPLAG00000017829	SMARCA2	98	88.759	ENSMALG00000009611	SMARCA2	99	88.771	Monopterus_albus
ENSPLAG00000017829	SMARCA2	79	84.586	MGP_CAROLIEiJ_G0022841	Smarca2	99	79.862	Mus_caroli
ENSPLAG00000017829	SMARCA2	81	82.585	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSPLAG00000017829	SMARCA2	95	77.022	MGP_PahariEiJ_G0014334	Smarca2	99	79.373	Mus_pahari
ENSPLAG00000017829	SMARCA2	81	82.585	MGP_SPRETEiJ_G0023759	Smarca2	97	87.879	Mus_spretus
ENSPLAG00000017829	SMARCA2	76	85.051	ENSMPUG00000005171	SMARCA2	93	85.465	Mustela_putorius_furo
ENSPLAG00000017829	SMARCA2	96	73.994	ENSMLUG00000002342	SMARCA2	99	76.430	Myotis_lucifugus
ENSPLAG00000017829	SMARCA2	95	78.283	ENSNGAG00000000108	Smarca2	99	78.395	Nannospalax_galili
ENSPLAG00000017829	SMARCA2	93	74.458	ENSNBRG00000017998	SMARCA2	94	82.587	Neolamprologus_brichardi
ENSPLAG00000017829	SMARCA2	96	78.201	ENSNLEG00000008575	SMARCA2	99	77.944	Nomascus_leucogenys
ENSPLAG00000017829	SMARCA2	90	73.211	ENSMEUG00000009812	SMARCA2	99	72.433	Notamacropus_eugenii
ENSPLAG00000017829	SMARCA2	79	78.447	ENSOPRG00000013474	SMARCA2	99	75.721	Ochotona_princeps
ENSPLAG00000017829	SMARCA2	82	80.880	ENSODEG00000005452	SMARCA2	99	78.178	Octodon_degus
ENSPLAG00000017829	SMARCA2	97	90.858	ENSONIG00000014163	SMARCA2	99	90.920	Oreochromis_niloticus
ENSPLAG00000017829	SMARCA2	79	83.691	ENSOCUG00000006320	SMARCA2	99	78.849	Oryctolagus_cuniculus
ENSPLAG00000017829	SMARCA2	96	90.070	ENSORLG00000020820	SMARCA2	99	90.512	Oryzias_latipes
ENSPLAG00000017829	SMARCA2	96	90.133	ENSORLG00015006289	SMARCA2	99	90.576	Oryzias_latipes_hsok
ENSPLAG00000017829	SMARCA2	98	88.036	ENSOMEG00000009736	-	99	89.867	Oryzias_melastigma
ENSPLAG00000017829	SMARCA2	80	82.520	ENSOGAG00000017053	SMARCA2	99	78.970	Otolemur_garnettii
ENSPLAG00000017829	SMARCA2	96	76.893	ENSOARG00000013265	SMARCA2	99	78.833	Ovis_aries
ENSPLAG00000017829	SMARCA2	86	86.176	ENSPPAG00000038717	SMARCA2	97	86.011	Pan_paniscus
ENSPLAG00000017829	SMARCA2	95	78.193	ENSPPRG00000001879	SMARCA2	99	79.773	Panthera_pardus
ENSPLAG00000017829	SMARCA2	94	79.410	ENSPTRG00000051168	SMARCA2	99	79.686	Pan_troglodytes
ENSPLAG00000017829	SMARCA2	96	75.684	ENSPANG00000025121	SMARCA2	99	75.350	Papio_anubis
ENSPLAG00000017829	SMARCA2	98	81.877	ENSPKIG00000018469	-	99	82.397	Paramormyrops_kingsleyae
ENSPLAG00000017829	SMARCA2	94	78.111	ENSPSIG00000006284	SMARCA2	99	79.060	Pelodiscus_sinensis
ENSPLAG00000017829	SMARCA2	98	81.649	ENSPMGG00000013696	-	99	81.959	Periophthalmus_magnuspinnatus
ENSPLAG00000017829	SMARCA2	96	76.542	ENSPEMG00000019821	Smarca2	99	79.106	Peromyscus_maniculatus_bairdii
ENSPLAG00000017829	SMARCA2	92	70.310	ENSPMAG00000005337	-	97	69.415	Petromyzon_marinus
ENSPLAG00000017829	SMARCA2	96	78.066	ENSPCIG00000015658	SMARCA2	99	80.025	Phascolarctos_cinereus
ENSPLAG00000017829	SMARCA2	97	99.874	ENSPFOG00000001856	SMARCA2	99	99.874	Poecilia_formosa
ENSPLAG00000017829	SMARCA2	99	99.568	ENSPMEG00000001815	-	99	99.568	Poecilia_mexicana
ENSPLAG00000017829	SMARCA2	97	98.869	ENSPREG00000013800	SMARCA2	99	98.869	Poecilia_reticulata
ENSPLAG00000017829	SMARCA2	96	77.108	ENSPPYG00000019258	SMARCA2	99	79.836	Pongo_abelii
ENSPLAG00000017829	SMARCA2	74	75.000	ENSPCAG00000016969	SMARCA2	76	75.000	Procavia_capensis
ENSPLAG00000017829	SMARCA2	96	76.299	ENSPCOG00000025709	SMARCA2	99	78.198	Propithecus_coquereli
ENSPLAG00000017829	SMARCA2	89	80.769	ENSPVAG00000000901	SMARCA2	92	80.640	Pteropus_vampyrus
ENSPLAG00000017829	SMARCA2	97	87.750	ENSPNYG00000004533	SMARCA2	99	87.879	Pundamilia_nyererei
ENSPLAG00000017829	SMARCA2	96	84.740	ENSPNAG00000014635	smarca2	98	84.938	Pygocentrus_nattereri
ENSPLAG00000017829	SMARCA2	82	81.118	ENSRNOG00000011931	Smarca2	99	78.745	Rattus_norvegicus
ENSPLAG00000017829	SMARCA2	96	78.398	ENSRBIG00000038618	SMARCA2	94	86.190	Rhinopithecus_bieti
ENSPLAG00000017829	SMARCA2	96	77.584	ENSRROG00000019271	SMARCA2	99	80.445	Rhinopithecus_roxellana
ENSPLAG00000017829	SMARCA2	92	83.122	ENSSBOG00000034827	SMARCA2	99	78.913	Saimiri_boliviensis_boliviensis
ENSPLAG00000017829	SMARCA2	94	79.860	ENSSHAG00000007884	SMARCA2	99	80.138	Sarcophilus_harrisii
ENSPLAG00000017829	SMARCA2	90	82.085	ENSSFOG00015014870	SMARCA2	97	83.125	Scleropages_formosus
ENSPLAG00000017829	SMARCA2	96	89.126	ENSSMAG00000013707	SMARCA2	99	89.755	Scophthalmus_maximus
ENSPLAG00000017829	SMARCA2	98	89.399	ENSSDUG00000008852	-	99	90.728	Seriola_dumerili
ENSPLAG00000017829	SMARCA2	98	87.933	ENSSLDG00000025449	SMARCA2	100	85.908	Seriola_lalandi_dorsalis
ENSPLAG00000017829	SMARCA2	86	82.030	ENSSARG00000007888	SMARCA2	93	78.146	Sorex_araneus
ENSPLAG00000017829	SMARCA2	91	76.216	ENSSPUG00000001629	SMARCA2	96	77.321	Sphenodon_punctatus
ENSPLAG00000017829	SMARCA2	96	91.841	ENSSPAG00000020091	-	99	91.719	Stegastes_partitus
ENSPLAG00000017829	SMARCA2	96	78.038	ENSSSCG00000005232	SMARCA2	99	79.623	Sus_scrofa
ENSPLAG00000017829	SMARCA2	94	79.381	ENSTGUG00000005460	SMARCA2	99	79.837	Taeniopygia_guttata
ENSPLAG00000017829	SMARCA2	97	87.406	ENSTRUG00000015619	SMARCA2	99	88.250	Takifugu_rubripes
ENSPLAG00000017829	SMARCA2	62	97.619	ENSTBEG00000008767	SMARCA2	68	97.619	Tupaia_belangeri
ENSPLAG00000017829	SMARCA2	92	78.663	ENSTTRG00000002033	SMARCA2	95	79.471	Tursiops_truncatus
ENSPLAG00000017829	SMARCA2	86	79.323	ENSUAMG00000024701	SMARCA2	99	78.775	Ursus_americanus
ENSPLAG00000017829	SMARCA2	85	76.179	ENSVPAG00000001204	SMARCA2	93	78.991	Vicugna_pacos
ENSPLAG00000017829	SMARCA2	73	84.549	ENSVVUG00000004598	SMARCA2	99	84.679	Vulpes_vulpes
ENSPLAG00000017829	SMARCA2	99	75.123	ENSXETG00000015299	smarca2	99	75.622	Xenopus_tropicalis
ENSPLAG00000017829	SMARCA2	89	91.667	ENSXCOG00000011073	SMARCA2	99	93.412	Xiphophorus_couchianus
ENSPLAG00000017829	SMARCA2	97	98.243	ENSXMAG00000015611	SMARCA2	99	98.243	Xiphophorus_maculatus