EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000017945 (Gene tree)
Gene ID: 106947579
Gene Symbol: rif1
Alias: -
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 25925 bases
Position: chrKQ545563.1:1148-27072
Accession: 106947579
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000028087	Rif1_N	PF12231.8	1.1e-80	1	1
ENSPLAP00000013139	Rif1_N	PF12231.8	2.1e-80	1	1
ENSPLAP00000027610	Rif1_N	PF12231.8	7.5e-78	1	1
ENSPLAP00000027236	Rif1_N	PF12231.8	7.9e-76	1	1
ENSPLAP00000012396	Rif1_N	PF12231.8	8.6e-72	1	1
ENSPLAP00000027273	Rif1_N	PF12231.8	8.7e-72	1	1
ENSPLAP00000012236	Rif1_N	PF12231.8	2.9e-67	1	1
ENSPLAP00000012239	Rif1_N	PF12231.8	3e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000019872	-	6717	-	ENSPLAP00000012239	2238 (aa)	-	-
ENSPLAT00000020774	-	6588	XM_015032673	ENSPLAP00000027610	2195 (aa)	XP_014888159	-
ENSPLAT00000020074	-	6822	-	ENSPLAP00000012396	2273 (aa)	-	-
ENSPLAT00000019868	-	6609	-	ENSPLAP00000012236	2202 (aa)	-	-
ENSPLAT00000021693	-	6783	-	ENSPLAP00000028087	2260 (aa)	-	-
ENSPLAT00000029838	-	6486	-	ENSPLAP00000013139	2161 (aa)	-	-
ENSPLAT00000020111	-	6840	-	ENSPLAP00000027273	2279 (aa)	-	-
ENSPLAT00000029558	-	6771	-	ENSPLAP00000027236	2256 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000017945's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000017945's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000017945	rif1	68	51.170	ENSG00000080345	RIF1	96	54.897	Homo_sapiens
ENSPLAG00000017945	rif1	100	64.622	ENSAPOG00000011073	rif1	99	64.808	Acanthochromis_polyacanthus
ENSPLAG00000017945	rif1	69	51.771	ENSAMEG00000008461	RIF1	63	51.771	Ailuropoda_melanoleuca
ENSPLAG00000017945	rif1	92	71.094	ENSACIG00000017765	rif1	99	65.716	Amphilophus_citrinellus
ENSPLAG00000017945	rif1	99	65.649	ENSAOCG00000017231	rif1	96	65.784	Amphiprion_ocellaris
ENSPLAG00000017945	rif1	96	75.000	ENSAPEG00000013228	rif1	99	75.000	Amphiprion_percula
ENSPLAG00000017945	rif1	91	70.762	ENSATEG00000022887	rif1	96	71.307	Anabas_testudineus
ENSPLAG00000017945	rif1	74	52.000	ENSAPLG00000007092	RIF1	68	51.825	Anas_platyrhynchos
ENSPLAG00000017945	rif1	79	49.089	ENSACAG00000003714	RIF1	68	49.404	Anolis_carolinensis
ENSPLAG00000017945	rif1	70	51.373	ENSANAG00000024840	RIF1	64	51.449	Aotus_nancymaae
ENSPLAG00000017945	rif1	98	53.114	ENSAMXG00000010910	rif1	80	63.063	Astyanax_mexicanus
ENSPLAG00000017945	rif1	69	51.526	ENSBTAG00000021020	RIF1	66	50.259	Bos_taurus
ENSPLAG00000017945	rif1	80	50.838	ENSCJAG00000003138	RIF1	66	50.915	Callithrix_jacchus
ENSPLAG00000017945	rif1	76	51.067	ENSCAFG00000005670	RIF1	64	51.067	Canis_familiaris
ENSPLAG00000017945	rif1	72	51.067	ENSCAFG00020016401	RIF1	67	51.067	Canis_lupus_dingo
ENSPLAG00000017945	rif1	73	50.475	ENSCHIG00000020327	RIF1	67	50.475	Capra_hircus
ENSPLAG00000017945	rif1	74	46.931	ENSTSYG00000008861	RIF1	62	49.473	Carlito_syrichta
ENSPLAG00000017945	rif1	74	39.130	ENSCAPG00000008957	RIF1	66	41.088	Cavia_aperea
ENSPLAG00000017945	rif1	68	48.653	ENSCPOG00000037898	RIF1	64	48.722	Cavia_porcellus
ENSPLAG00000017945	rif1	68	49.195	ENSCCAG00000024760	RIF1	62	49.195	Cebus_capucinus
ENSPLAG00000017945	rif1	72	51.452	ENSCATG00000033353	RIF1	65	51.532	Cercocebus_atys
ENSPLAG00000017945	rif1	70	51.167	ENSCLAG00000001517	RIF1	61	51.167	Chinchilla_lanigera
ENSPLAG00000017945	rif1	72	51.613	ENSCSAG00000016089	RIF1	65	51.694	Chlorocebus_sabaeus
ENSPLAG00000017945	rif1	66	48.889	ENSCHOG00000007187	RIF1	60	50.228	Choloepus_hoffmanni
ENSPLAG00000017945	rif1	73	51.272	ENSCPBG00000025885	RIF1	74	52.023	Chrysemys_picta_bellii
ENSPLAG00000017945	rif1	74	48.632	ENSCANG00000028962	RIF1	66	50.186	Colobus_angolensis_palliatus
ENSPLAG00000017945	rif1	74	49.278	ENSCGRG00001024589	Rif1	65	49.799	Cricetulus_griseus_chok1gshd
ENSPLAG00000017945	rif1	70	50.778	ENSCGRG00000010713	Rif1	65	51.316	Cricetulus_griseus_crigri
ENSPLAG00000017945	rif1	98	56.008	ENSCSEG00000003945	rif1	99	55.603	Cynoglossus_semilaevis
ENSPLAG00000017945	rif1	99	73.241	ENSCVAG00000022479	rif1	96	73.241	Cyprinodon_variegatus
ENSPLAG00000017945	rif1	91	61.299	ENSDARG00000062650	rif1	83	62.059	Danio_rerio
ENSPLAG00000017945	rif1	77	49.331	ENSDNOG00000011194	RIF1	67	49.489	Dasypus_novemcinctus
ENSPLAG00000017945	rif1	69	46.277	ENSETEG00000012421	RIF1	63	46.720	Echinops_telfairi
ENSPLAG00000017945	rif1	61	67.320	ENSEASG00005023434	RIF1	58	67.869	Equus_asinus_asinus
ENSPLAG00000017945	rif1	70	51.354	ENSECAG00000012679	RIF1	62	55.432	Equus_caballus
ENSPLAG00000017945	rif1	73	63.928	ENSELUG00000006826	rif1	62	62.762	Esox_lucius
ENSPLAG00000017945	rif1	73	51.108	ENSFCAG00000029742	RIF1	66	51.108	Felis_catus
ENSPLAG00000017945	rif1	60	48.918	ENSFALG00000013874	RIF1	67	49.012	Ficedula_albicollis
ENSPLAG00000017945	rif1	70	50.651	ENSFDAG00000006538	RIF1	63	50.805	Fukomys_damarensis
ENSPLAG00000017945	rif1	99	72.007	ENSFHEG00000013721	rif1	99	72.092	Fundulus_heteroclitus
ENSPLAG00000017945	rif1	67	63.636	ENSGMOG00000003517	rif1	99	63.636	Gadus_morhua
ENSPLAG00000017945	rif1	68	48.229	ENSGALG00000012484	RIF1	75	45.992	Gallus_gallus
ENSPLAG00000017945	rif1	97	90.909	ENSGAFG00000017196	rif1	99	91.090	Gambusia_affinis
ENSPLAG00000017945	rif1	91	74.576	ENSGACG00000008579	rif1	87	74.684	Gasterosteus_aculeatus
ENSPLAG00000017945	rif1	80	45.895	ENSGAGG00000012595	RIF1	76	49.703	Gopherus_agassizii
ENSPLAG00000017945	rif1	59	58.466	ENSGGOG00000040178	RIF1	55	58.841	Gorilla_gorilla
ENSPLAG00000017945	rif1	99	71.780	ENSHBUG00000007125	rif1	96	72.064	Haplochromis_burtoni
ENSPLAG00000017945	rif1	69	50.201	ENSHGLG00100009807	RIF1	62	50.357	Heterocephalus_glaber_male
ENSPLAG00000017945	rif1	100	62.253	ENSHCOG00000015943	rif1	70	63.062	Hippocampus_comes
ENSPLAG00000017945	rif1	73	63.534	ENSIPUG00000021703	rif1	75	57.445	Ictalurus_punctatus
ENSPLAG00000017945	rif1	72	51.104	ENSSTOG00000020712	RIF1	66	51.144	Ictidomys_tridecemlineatus
ENSPLAG00000017945	rif1	69	49.237	ENSJJAG00000023000	Rif1	65	49.278	Jaculus_jaculus
ENSPLAG00000017945	rif1	99	60.870	ENSKMAG00000002852	rif1	99	61.039	Kryptolebias_marmoratus
ENSPLAG00000017945	rif1	94	71.317	ENSLBEG00000023196	rif1	83	68.979	Labrus_bergylta
ENSPLAG00000017945	rif1	99	49.710	ENSLACG00000005425	RIF1	71	52.460	Latimeria_chalumnae
ENSPLAG00000017945	rif1	79	58.333	ENSLOCG00000002657	rif1	83	60.366	Lepisosteus_oculatus
ENSPLAG00000017945	rif1	72	50.990	ENSLAFG00000009796	RIF1	66	50.990	Loxodonta_africana
ENSPLAG00000017945	rif1	72	51.449	ENSMFAG00000032233	RIF1	65	51.613	Macaca_fascicularis
ENSPLAG00000017945	rif1	72	51.449	ENSMMUG00000008611	RIF1	65	51.613	Macaca_mulatta
ENSPLAG00000017945	rif1	72	51.532	ENSMNEG00000031616	RIF1	65	51.613	Macaca_nemestrina
ENSPLAG00000017945	rif1	72	51.452	ENSMLEG00000042945	RIF1	65	51.532	Mandrillus_leucophaeus
ENSPLAG00000017945	rif1	99	57.276	ENSMAMG00000001745	rif1	98	58.717	Mastacembelus_armatus
ENSPLAG00000017945	rif1	94	68.062	ENSMZEG00005020920	rif1	99	66.381	Maylandia_zebra
ENSPLAG00000017945	rif1	70	48.726	ENSMGAG00000012732	RIF1	74	50.200	Meleagris_gallopavo
ENSPLAG00000017945	rif1	64	64.470	ENSMAUG00000013158	Rif1	62	64.470	Mesocricetus_auratus
ENSPLAG00000017945	rif1	77	50.826	ENSMICG00000046127	RIF1	66	48.311	Microcebus_murinus
ENSPLAG00000017945	rif1	68	48.796	ENSMOCG00000009381	Rif1	64	49.072	Microtus_ochrogaster
ENSPLAG00000017945	rif1	99	66.951	ENSMMOG00000006519	rif1	96	67.424	Mola_mola
ENSPLAG00000017945	rif1	73	50.264	ENSMODG00000003703	RIF1	68	50.265	Monodelphis_domestica
ENSPLAG00000017945	rif1	95	69.429	ENSMALG00000016759	rif1	94	69.429	Monopterus_albus
ENSPLAG00000017945	rif1	68	50.685	MGP_CAROLIEiJ_G0023555	Rif1	64	50.887	Mus_caroli
ENSPLAG00000017945	rif1	69	51.202	ENSMUSG00000036202	Rif1	64	51.362	Mus_musculus
ENSPLAG00000017945	rif1	71	47.664	MGP_PahariEiJ_G0025006	Rif1	64	48.377	Mus_pahari
ENSPLAG00000017945	rif1	69	51.610	MGP_SPRETEiJ_G0024476	Rif1	64	52.093	Mus_spretus
ENSPLAG00000017945	rif1	70	51.072	ENSMPUG00000000371	RIF1	63	51.072	Mustela_putorius_furo
ENSPLAG00000017945	rif1	57	48.540	ENSMLUG00000003376	RIF1	59	48.540	Myotis_lucifugus
ENSPLAG00000017945	rif1	72	51.108	ENSNGAG00000009268	Rif1	68	51.028	Nannospalax_galili
ENSPLAG00000017945	rif1	99	61.522	ENSNBRG00000014257	rif1	100	62.783	Neolamprologus_brichardi
ENSPLAG00000017945	rif1	71	51.081	ENSNLEG00000010955	RIF1	64	50.799	Nomascus_leucogenys
ENSPLAG00000017945	rif1	53	63.677	ENSMEUG00000007601	-	53	64.286	Notamacropus_eugenii
ENSPLAG00000017945	rif1	75	46.863	ENSODEG00000003950	RIF1	69	47.161	Octodon_degus
ENSPLAG00000017945	rif1	97	65.706	ENSONIG00000013657	rif1	92	73.175	Oreochromis_niloticus
ENSPLAG00000017945	rif1	59	55.514	ENSOANG00000006078	-	55	55.535	Ornithorhynchus_anatinus
ENSPLAG00000017945	rif1	70	50.595	ENSOCUG00000017435	RIF1	64	50.949	Oryctolagus_cuniculus
ENSPLAG00000017945	rif1	98	66.826	ENSORLG00020001302	rif1	95	67.684	Oryzias_latipes_hni
ENSPLAG00000017945	rif1	98	67.788	ENSORLG00015000009	rif1	94	67.788	Oryzias_latipes_hsok
ENSPLAG00000017945	rif1	99	55.336	ENSOMEG00000021513	rif1	91	61.494	Oryzias_melastigma
ENSPLAG00000017945	rif1	72	51.286	ENSOGAG00000006141	RIF1	63	51.202	Otolemur_garnettii
ENSPLAG00000017945	rif1	73	51.028	ENSOARG00000008930	RIF1	67	51.028	Ovis_aries
ENSPLAG00000017945	rif1	68	51.170	ENSPPAG00000023754	RIF1	62	51.168	Pan_paniscus
ENSPLAG00000017945	rif1	72	50.870	ENSPPRG00000003618	RIF1	66	51.028	Panthera_pardus
ENSPLAG00000017945	rif1	72	50.870	ENSPTIG00000020652	RIF1	66	51.028	Panthera_tigris_altaica
ENSPLAG00000017945	rif1	68	51.251	ENSPTRG00000012534	RIF1	62	51.249	Pan_troglodytes
ENSPLAG00000017945	rif1	72	51.532	ENSPANG00000008525	RIF1	65	51.613	Papio_anubis
ENSPLAG00000017945	rif1	78	53.571	ENSPKIG00000004267	rif1	88	61.078	Paramormyrops_kingsleyae
ENSPLAG00000017945	rif1	76	77.479	ENSPMGG00000016141	rif1	94	77.479	Periophthalmus_magnuspinnatus
ENSPLAG00000017945	rif1	72	49.726	ENSPEMG00000000446	Rif1	66	49.883	Peromyscus_maniculatus_bairdii
ENSPLAG00000017945	rif1	74	49.778	ENSPCIG00000009185	RIF1	68	49.852	Phascolarctos_cinereus
ENSPLAG00000017945	rif1	99	94.348	ENSPFOG00000017804	rif1	99	94.348	Poecilia_formosa
ENSPLAG00000017945	rif1	92	94.411	ENSPFOG00000000554	-	100	94.411	Poecilia_formosa
ENSPLAG00000017945	rif1	89	93.305	ENSPMEG00000006897	-	99	93.305	Poecilia_mexicana
ENSPLAG00000017945	rif1	100	90.269	ENSPREG00000018052	rif1	100	90.226	Poecilia_reticulata
ENSPLAG00000017945	rif1	71	51.496	ENSPPYG00000012846	RIF1	62	51.491	Pongo_abelii
ENSPLAG00000017945	rif1	69	51.595	ENSPCOG00000027888	RIF1	63	51.595	Propithecus_coquereli
ENSPLAG00000017945	rif1	60	59.063	ENSPVAG00000014276	RIF1	57	59.592	Pteropus_vampyrus
ENSPLAG00000017945	rif1	99	60.889	ENSPNYG00000012940	rif1	99	60.534	Pundamilia_nyererei
ENSPLAG00000017945	rif1	88	63.190	ENSPNAG00000016685	rif1	80	63.190	Pygocentrus_nattereri
ENSPLAG00000017945	rif1	69	49.072	ENSRNOG00000054901	Rif1	64	49.040	Rattus_norvegicus
ENSPLAG00000017945	rif1	72	50.359	ENSRBIG00000003704	RIF1	63	50.478	Rhinopithecus_bieti
ENSPLAG00000017945	rif1	71	51.214	ENSRROG00000028206	RIF1	62	51.210	Rhinopithecus_roxellana
ENSPLAG00000017945	rif1	68	57.500	ENSSBOG00000029530	RIF1	64	55.952	Saimiri_boliviensis_boliviensis
ENSPLAG00000017945	rif1	70	50.595	ENSSHAG00000018552	RIF1	65	50.675	Sarcophilus_harrisii
ENSPLAG00000017945	rif1	71	58.104	ENSSFOG00015021539	rif1	80	62.928	Scleropages_formosus
ENSPLAG00000017945	rif1	99	68.079	ENSSMAG00000011704	rif1	94	72.586	Scophthalmus_maximus
ENSPLAG00000017945	rif1	94	71.348	ENSSDUG00000015632	rif1	99	68.961	Seriola_dumerili
ENSPLAG00000017945	rif1	98	72.469	ENSSLDG00000019531	rif1	96	72.753	Seriola_lalandi_dorsalis
ENSPLAG00000017945	rif1	67	49.872	ENSSPUG00000003062	RIF1	67	49.100	Sphenodon_punctatus
ENSPLAG00000017945	rif1	66	74.447	ENSSPAG00000018359	rif1	99	75.776	Stegastes_partitus
ENSPLAG00000017945	rif1	72	50.392	ENSSSCG00000016395	RIF1	65	50.628	Sus_scrofa
ENSPLAG00000017945	rif1	50	55.076	ENSTGUG00000016761	RIF1	100	55.313	Taeniopygia_guttata
ENSPLAG00000017945	rif1	99	55.983	ENSTRUG00000015808	rif1	99	55.289	Takifugu_rubripes
ENSPLAG00000017945	rif1	99	54.369	ENSTNIG00000011538	rif1	92	68.506	Tetraodon_nigroviridis
ENSPLAG00000017945	rif1	65	53.144	ENSTBEG00000016082	RIF1	55	53.527	Tupaia_belangeri
ENSPLAG00000017945	rif1	70	50.869	ENSTTRG00000011190	RIF1	64	50.869	Tursiops_truncatus
ENSPLAG00000017945	rif1	58	49.254	ENSUAMG00000026385	RIF1	59	49.254	Ursus_americanus
ENSPLAG00000017945	rif1	69	51.249	ENSUMAG00000000337	RIF1	63	51.249	Ursus_maritimus
ENSPLAG00000017945	rif1	78	48.081	ENSVPAG00000002162	RIF1	68	48.081	Vicugna_pacos
ENSPLAG00000017945	rif1	80	50.789	ENSVVUG00000011293	RIF1	64	50.789	Vulpes_vulpes
ENSPLAG00000017945	rif1	74	46.608	ENSXETG00000004530	rif1	70	46.766	Xenopus_tropicalis
ENSPLAG00000017945	rif1	100	86.135	ENSXMAG00000000506	rif1	100	86.268	Xiphophorus_maculatus