EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000018076 (Gene tree)
Gene ID: 106956404
Gene Symbol: sf1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 16484 bases
Position: chrKQ545355.1:615586-632069
Accession: 106956404
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000028597	KH_1	PF00013.29	3.2e-06	1	1
ENSPLAP00000028597	zf-CCHC	PF00098.23	0.00046	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000022706	-	2791	XM_015047221	ENSPLAP00000028597	656 (aa)	XP_014902707	-

Gene Model

Click here to download ENSPLAG00000018076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000018076's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000018076	sf1	93	89.577	ENSAPOG00000012341	sf1	90	88.762	Acanthochromis_polyacanthus
ENSPLAG00000018076	sf1	61	79.187	ENSAMEG00000017828	SF1	57	83.862	Ailuropoda_melanoleuca
ENSPLAG00000018076	sf1	93	89.723	ENSAOCG00000010934	sf1	90	89.886	Amphiprion_ocellaris
ENSPLAG00000018076	sf1	93	89.723	ENSAPEG00000009498	sf1	90	89.886	Amphiprion_percula
ENSPLAG00000018076	sf1	61	90.099	ENSATEG00000001894	sf1	90	89.739	Anabas_testudineus
ENSPLAG00000018076	sf1	61	79.187	ENSANAG00000026664	-	88	83.862	Aotus_nancymaae
ENSPLAG00000018076	sf1	87	65.625	ENSANAG00000022607	-	88	74.799	Aotus_nancymaae
ENSPLAG00000018076	sf1	62	88.264	ENSACLG00000007633	sf1	90	85.251	Astatotilapia_calliptera
ENSPLAG00000018076	sf1	63	84.223	ENSAMXG00000003630	sf1	80	84.779	Astyanax_mexicanus
ENSPLAG00000018076	sf1	61	79.187	ENSBTAG00000001035	SF1	61	83.862	Bos_taurus
ENSPLAG00000018076	sf1	61	79.187	ENSCJAG00000002780	SF1	58	83.862	Callithrix_jacchus
ENSPLAG00000018076	sf1	61	79.187	ENSCAFG00000014239	SF1	58	83.862	Canis_familiaris
ENSPLAG00000018076	sf1	61	79.187	ENSCAFG00020014381	SF1	58	83.862	Canis_lupus_dingo
ENSPLAG00000018076	sf1	61	79.187	ENSCHIG00000025867	SF1	67	83.862	Capra_hircus
ENSPLAG00000018076	sf1	61	77.885	ENSCAPG00000010762	SF1	66	83.820	Cavia_aperea
ENSPLAG00000018076	sf1	61	77.938	ENSCPOG00000012290	SF1	69	83.820	Cavia_porcellus
ENSPLAG00000018076	sf1	61	71.220	ENSCCAG00000023781	-	82	73.810	Cebus_capucinus
ENSPLAG00000018076	sf1	61	79.187	ENSCCAG00000037881	SF1	88	83.862	Cebus_capucinus
ENSPLAG00000018076	sf1	61	79.187	ENSCATG00000011564	SF1	88	83.862	Cercocebus_atys
ENSPLAG00000018076	sf1	61	79.187	ENSCSAG00000007258	SF1	67	83.862	Chlorocebus_sabaeus
ENSPLAG00000018076	sf1	58	73.935	ENSCHOG00000006008	SF1	66	78.273	Choloepus_hoffmanni
ENSPLAG00000018076	sf1	84	49.281	ENSCSAVG00000009055	-	72	62.215	Ciona_savignyi
ENSPLAG00000018076	sf1	61	79.187	ENSCANG00000042201	SF1	88	83.862	Colobus_angolensis_palliatus
ENSPLAG00000018076	sf1	61	79.426	ENSCGRG00001003677	Sf1	65	84.392	Cricetulus_griseus_chok1gshd
ENSPLAG00000018076	sf1	61	79.376	ENSCGRG00000001708	Sf1	68	84.350	Cricetulus_griseus_crigri
ENSPLAG00000018076	sf1	93	87.642	ENSCSEG00000014375	sf1	87	87.928	Cynoglossus_semilaevis
ENSPLAG00000018076	sf1	94	94.797	ENSCVAG00000001670	sf1	97	89.901	Cyprinodon_variegatus
ENSPLAG00000018076	sf1	87	83.803	ENSDARG00000008188	sf1	95	85.739	Danio_rerio
ENSPLAG00000018076	sf1	61	79.426	ENSDNOG00000001282	SF1	67	83.862	Dasypus_novemcinctus
ENSPLAG00000018076	sf1	61	79.187	ENSDORG00000016334	Sf1	58	83.862	Dipodomys_ordii
ENSPLAG00000018076	sf1	61	72.115	ENSETEG00000012830	SF1	51	75.871	Echinops_telfairi
ENSPLAG00000018076	sf1	61	79.187	ENSEASG00005018272	SF1	67	83.862	Equus_asinus_asinus
ENSPLAG00000018076	sf1	61	79.426	ENSECAG00000024544	SF1	67	84.127	Equus_caballus
ENSPLAG00000018076	sf1	54	79.144	ENSEEUG00000001058	SF1	83	84.132	Erinaceus_europaeus
ENSPLAG00000018076	sf1	71	77.893	ENSELUG00000013225	sf1	57	80.856	Esox_lucius
ENSPLAG00000018076	sf1	61	79.187	ENSFCAG00000012231	SF1	58	83.862	Felis_catus
ENSPLAG00000018076	sf1	61	79.137	ENSFDAG00000009833	SF1	66	83.820	Fukomys_damarensis
ENSPLAG00000018076	sf1	93	89.379	ENSFHEG00000022656	sf1	90	89.379	Fundulus_heteroclitus
ENSPLAG00000018076	sf1	73	77.292	ENSGMOG00000007469	sf1	59	93.865	Gadus_morhua
ENSPLAG00000018076	sf1	87	98.594	ENSGAFG00000019284	sf1	93	98.594	Gambusia_affinis
ENSPLAG00000018076	sf1	64	81.119	ENSGAGG00000021691	SF1	54	82.051	Gopherus_agassizii
ENSPLAG00000018076	sf1	62	90.220	ENSHBUG00000011598	sf1	90	89.286	Haplochromis_burtoni
ENSPLAG00000018076	sf1	61	79.187	ENSHGLG00000009541	SF1	65	83.862	Heterocephalus_glaber_female
ENSPLAG00000018076	sf1	61	79.137	ENSHGLG00100013879	-	66	83.820	Heterocephalus_glaber_male
ENSPLAG00000018076	sf1	61	68.966	ENSHGLG00100008255	-	72	75.066	Heterocephalus_glaber_male
ENSPLAG00000018076	sf1	64	86.085	ENSHCOG00000011388	sf1	90	86.460	Hippocampus_comes
ENSPLAG00000018076	sf1	61	79.137	ENSSTOG00000009790	-	59	83.820	Ictidomys_tridecemlineatus
ENSPLAG00000018076	sf1	65	70.159	ENSSTOG00000024353	-	67	73.368	Ictidomys_tridecemlineatus
ENSPLAG00000018076	sf1	61	79.426	ENSJJAG00000011788	Sf1	58	84.127	Jaculus_jaculus
ENSPLAG00000018076	sf1	63	92.233	ENSKMAG00000005854	sf1	80	91.969	Kryptolebias_marmoratus
ENSPLAG00000018076	sf1	78	89.104	ENSLBEG00000019836	sf1	68	87.327	Labrus_bergylta
ENSPLAG00000018076	sf1	56	89.757	ENSLOCG00000002130	sf1	82	81.955	Lepisosteus_oculatus
ENSPLAG00000018076	sf1	61	80.288	ENSLAFG00000007201	SF1	63	84.574	Loxodonta_africana
ENSPLAG00000018076	sf1	61	79.187	ENSMFAG00000033122	SF1	88	83.862	Macaca_fascicularis
ENSPLAG00000018076	sf1	61	79.187	ENSMMUG00000022606	SF1	90	83.862	Macaca_mulatta
ENSPLAG00000018076	sf1	61	79.187	ENSMNEG00000037901	SF1	88	83.862	Macaca_nemestrina
ENSPLAG00000018076	sf1	61	79.187	ENSMLEG00000040706	SF1	91	82.338	Mandrillus_leucophaeus
ENSPLAG00000018076	sf1	61	91.852	ENSMAMG00000001780	sf1	90	91.133	Mastacembelus_armatus
ENSPLAG00000018076	sf1	62	90.220	ENSMZEG00005009196	sf1	90	89.286	Maylandia_zebra
ENSPLAG00000018076	sf1	61	79.426	ENSMAUG00000014064	Sf1	65	84.392	Mesocricetus_auratus
ENSPLAG00000018076	sf1	61	79.187	ENSMICG00000001202	SF1	88	83.641	Microcebus_murinus
ENSPLAG00000018076	sf1	61	79.187	ENSMOCG00000022038	Sf1	65	84.127	Microtus_ochrogaster
ENSPLAG00000018076	sf1	61	88.060	ENSMMOG00000020474	sf1	75	87.767	Mola_mola
ENSPLAG00000018076	sf1	61	79.236	ENSMODG00000029407	SF1	80	84.127	Monodelphis_domestica
ENSPLAG00000018076	sf1	56	91.599	ENSMALG00000020521	sf1	84	88.710	Monopterus_albus
ENSPLAG00000018076	sf1	61	79.426	MGP_CAROLIEiJ_G0022607	Sf1	99	95.489	Mus_caroli
ENSPLAG00000018076	sf1	61	79.426	ENSMUSG00000024949	Sf1	99	95.489	Mus_musculus
ENSPLAG00000018076	sf1	61	79.426	MGP_PahariEiJ_G0014101	Sf1	99	95.489	Mus_pahari
ENSPLAG00000018076	sf1	61	79.426	MGP_SPRETEiJ_G0023518	Sf1	99	95.489	Mus_spretus
ENSPLAG00000018076	sf1	61	79.426	ENSMPUG00000012684	SF1	58	83.862	Mustela_putorius_furo
ENSPLAG00000018076	sf1	61	79.187	ENSMLUG00000015217	-	59	82.124	Myotis_lucifugus
ENSPLAG00000018076	sf1	66	74.889	ENSMLUG00000029800	-	63	80.159	Myotis_lucifugus
ENSPLAG00000018076	sf1	61	79.426	ENSNGAG00000005550	Sf1	65	84.127	Nannospalax_galili
ENSPLAG00000018076	sf1	61	79.187	ENSNLEG00000005236	-	88	83.862	Nomascus_leucogenys
ENSPLAG00000018076	sf1	60	79.319	ENSMEUG00000013424	SF1	68	84.367	Notamacropus_eugenii
ENSPLAG00000018076	sf1	54	79.412	ENSOPRG00000005008	SF1	66	84.431	Ochotona_princeps
ENSPLAG00000018076	sf1	62	89.976	ENSONIG00000015728	sf1	90	89.123	Oreochromis_niloticus
ENSPLAG00000018076	sf1	51	74.499	ENSOANG00000002909	SF1	76	75.549	Ornithorhynchus_anatinus
ENSPLAG00000018076	sf1	61	79.187	ENSOCUG00000026486	SF1	59	83.862	Oryctolagus_cuniculus
ENSPLAG00000018076	sf1	64	87.850	ENSORLG00000011853	sf1	91	82.297	Oryzias_latipes
ENSPLAG00000018076	sf1	64	87.850	ENSORLG00020011834	sf1	91	82.297	Oryzias_latipes_hni
ENSPLAG00000018076	sf1	63	88.537	ENSORLG00015012855	sf1	91	82.154	Oryzias_latipes_hsok
ENSPLAG00000018076	sf1	63	90.024	ENSOMEG00000005210	sf1	90	89.216	Oryzias_melastigma
ENSPLAG00000018076	sf1	61	79.187	ENSOGAG00000016196	SF1	58	83.862	Otolemur_garnettii
ENSPLAG00000018076	sf1	61	79.187	ENSOARG00000009166	SF1	65	83.862	Ovis_aries
ENSPLAG00000018076	sf1	61	79.808	ENSPPAG00000002799	-	90	83.862	Pan_paniscus
ENSPLAG00000018076	sf1	61	79.187	ENSPPRG00000013566	SF1	57	85.042	Panthera_pardus
ENSPLAG00000018076	sf1	61	79.187	ENSPTIG00000016141	SF1	67	83.029	Panthera_tigris_altaica
ENSPLAG00000018076	sf1	62	79.343	ENSPTRG00000003846	SF1	88	83.862	Pan_troglodytes
ENSPLAG00000018076	sf1	61	79.187	ENSPANG00000020754	SF1	88	83.862	Papio_anubis
ENSPLAG00000018076	sf1	50	79.822	ENSPKIG00000012116	sf1	84	78.338	Paramormyrops_kingsleyae
ENSPLAG00000018076	sf1	61	79.426	ENSPEMG00000010463	Sf1	65	84.392	Peromyscus_maniculatus_bairdii
ENSPLAG00000018076	sf1	61	79.426	ENSPCIG00000018173	SF1	60	84.127	Phascolarctos_cinereus
ENSPLAG00000018076	sf1	96	99.524	ENSPFOG00000013683	sf1	93	99.524	Poecilia_formosa
ENSPLAG00000018076	sf1	100	97.104	ENSPMEG00000005726	sf1	100	97.104	Poecilia_mexicana
ENSPLAG00000018076	sf1	96	98.413	ENSPREG00000004155	sf1	93	98.413	Poecilia_reticulata
ENSPLAG00000018076	sf1	61	79.187	ENSPPYG00000003098	-	70	83.862	Pongo_abelii
ENSPLAG00000018076	sf1	61	78.947	ENSPCAG00000013631	SF1	55	83.598	Procavia_capensis
ENSPLAG00000018076	sf1	61	79.187	ENSPCOG00000027546	SF1	88	83.641	Propithecus_coquereli
ENSPLAG00000018076	sf1	61	79.426	ENSPVAG00000016938	SF1	62	78.333	Pteropus_vampyrus
ENSPLAG00000018076	sf1	62	89.976	ENSPNYG00000004673	sf1	90	89.123	Pundamilia_nyererei
ENSPLAG00000018076	sf1	62	83.824	ENSPNAG00000013072	sf1	90	84.375	Pygocentrus_nattereri
ENSPLAG00000018076	sf1	61	79.426	ENSRNOG00000021085	Sf1	60	84.194	Rattus_norvegicus
ENSPLAG00000018076	sf1	61	79.187	ENSRBIG00000042818	SF1	88	83.862	Rhinopithecus_bieti
ENSPLAG00000018076	sf1	61	79.187	ENSRROG00000045655	SF1	91	82.338	Rhinopithecus_roxellana
ENSPLAG00000018076	sf1	54	38.378	YLR116W	MSL5	56	44.203	Saccharomyces_cerevisiae
ENSPLAG00000018076	sf1	87	62.848	ENSSBOG00000022267	-	87	70.185	Saimiri_boliviensis_boliviensis
ENSPLAG00000018076	sf1	72	72.074	ENSSHAG00000006841	SF1	68	85.484	Sarcophilus_harrisii
ENSPLAG00000018076	sf1	64	82.517	ENSSFOG00015021978	sf1	61	83.175	Scleropages_formosus
ENSPLAG00000018076	sf1	79	85.102	ENSSMAG00000007549	sf1	82	85.102	Scophthalmus_maximus
ENSPLAG00000018076	sf1	62	90.024	ENSSDUG00000003903	sf1	91	90.067	Seriola_dumerili
ENSPLAG00000018076	sf1	61	74.820	ENSSARG00000008180	SF1	71	79.045	Sorex_araneus
ENSPLAG00000018076	sf1	61	79.254	ENSSPUG00000012907	SF1	58	86.761	Sphenodon_punctatus
ENSPLAG00000018076	sf1	93	89.723	ENSSPAG00000019060	sf1	90	89.886	Stegastes_partitus
ENSPLAG00000018076	sf1	61	79.187	ENSSSCG00000013021	SF1	67	83.862	Sus_scrofa
ENSPLAG00000018076	sf1	74	71.780	ENSTNIG00000004820	sf1	75	76.167	Tetraodon_nigroviridis
ENSPLAG00000018076	sf1	61	73.464	ENSTBEG00000013133	SF1	55	75.457	Tupaia_belangeri
ENSPLAG00000018076	sf1	61	74.580	ENSTTRG00000008857	SF1	68	79.045	Tursiops_truncatus
ENSPLAG00000018076	sf1	61	81.022	ENSUMAG00000007268	SF1	69	83.641	Ursus_maritimus
ENSPLAG00000018076	sf1	61	79.187	ENSVVUG00000028585	SF1	67	83.862	Vulpes_vulpes
ENSPLAG00000018076	sf1	87	72.774	ENSXETG00000008434	sf1	62	85.635	Xenopus_tropicalis
ENSPLAG00000018076	sf1	73	92.153	ENSXCOG00000003704	sf1	94	92.153	Xiphophorus_couchianus
ENSPLAG00000018076	sf1	96	98.413	ENSXMAG00000007822	sf1	93	98.413	Xiphophorus_maculatus