EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000018459 (Gene tree)
Gene ID: 106944862
Gene Symbol: snd1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 194764 bases
Position: chrKQ545430.1:2410-197173
Accession: 106944862
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000028765	TUDOR	PF00567.24	1.9e-26	1	1
ENSPLAP00000028765	SNase	PF00565.17	7.8e-67	1	4
ENSPLAP00000028765	SNase	PF00565.17	7.8e-67	2	4
ENSPLAP00000028765	SNase	PF00565.17	7.8e-67	3	4
ENSPLAP00000028765	SNase	PF00565.17	7.8e-67	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000023065	-	3895	XM_015028139	ENSPLAP00000028765	938 (aa)	XP_014883625	-

Gene Model

Click here to download ENSPLAG00000018459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000018459's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000018459	snd1	96	84.650	ENSG00000197157	SND1	100	83.772	Homo_sapiens
ENSPLAG00000018459	snd1	97	96.158	ENSAPOG00000017599	snd1	100	96.158	Acanthochromis_polyacanthus
ENSPLAG00000018459	snd1	98	83.170	ENSAMEG00000004664	SND1	95	83.170	Ailuropoda_melanoleuca
ENSPLAG00000018459	snd1	97	91.987	ENSACIG00000003551	snd1	100	91.987	Amphilophus_citrinellus
ENSPLAG00000018459	snd1	97	95.939	ENSAOCG00000014166	snd1	100	95.939	Amphiprion_ocellaris
ENSPLAG00000018459	snd1	97	95.939	ENSAPEG00000007067	snd1	100	95.939	Amphiprion_percula
ENSPLAG00000018459	snd1	95	95.190	ENSATEG00000018475	snd1	89	95.190	Anabas_testudineus
ENSPLAG00000018459	snd1	96	84.650	ENSANAG00000034463	SND1	100	83.772	Aotus_nancymaae
ENSPLAG00000018459	snd1	97	94.951	ENSACLG00000022897	snd1	100	94.951	Astatotilapia_calliptera
ENSPLAG00000018459	snd1	97	90.330	ENSAMXG00000016318	snd1	99	90.330	Astyanax_mexicanus
ENSPLAG00000018459	snd1	96	84.761	ENSBTAG00000010692	SND1	100	83.882	Bos_taurus
ENSPLAG00000018459	snd1	96	46.452	WBGene00006626	tsn-1	99	46.559	Caenorhabditis_elegans
ENSPLAG00000018459	snd1	96	84.316	ENSCJAG00000017668	SND1	100	83.443	Callithrix_jacchus
ENSPLAG00000018459	snd1	97	83.882	ENSCAFG00000001700	SND1	100	83.882	Canis_familiaris
ENSPLAG00000018459	snd1	97	83.882	ENSCAFG00020021639	SND1	100	83.882	Canis_lupus_dingo
ENSPLAG00000018459	snd1	96	84.650	ENSCHIG00000023390	SND1	100	83.772	Capra_hircus
ENSPLAG00000018459	snd1	68	87.719	ENSTSYG00000004979	SND1	96	87.719	Carlito_syrichta
ENSPLAG00000018459	snd1	94	74.437	ENSCAPG00000010677	SND1	97	73.802	Cavia_aperea
ENSPLAG00000018459	snd1	96	84.427	ENSCPOG00000006251	SND1	100	83.553	Cavia_porcellus
ENSPLAG00000018459	snd1	96	84.538	ENSCCAG00000036847	SND1	100	83.662	Cebus_capucinus
ENSPLAG00000018459	snd1	96	84.872	ENSCATG00000035214	SND1	100	83.991	Cercocebus_atys
ENSPLAG00000018459	snd1	96	84.650	ENSCLAG00000011796	SND1	98	85.906	Chinchilla_lanigera
ENSPLAG00000018459	snd1	96	84.872	ENSCSAG00000010182	SND1	100	83.991	Chlorocebus_sabaeus
ENSPLAG00000018459	snd1	75	77.228	ENSCHOG00000002218	SND1	85	77.000	Choloepus_hoffmanni
ENSPLAG00000018459	snd1	97	84.083	ENSCPBG00000018094	SND1	100	84.083	Chrysemys_picta_bellii
ENSPLAG00000018459	snd1	95	56.478	ENSCING00000000524	-	99	56.004	Ciona_intestinalis
ENSPLAG00000018459	snd1	97	56.645	ENSCSAVG00000008807	-	99	56.427	Ciona_savignyi
ENSPLAG00000018459	snd1	96	84.872	ENSCANG00000035119	SND1	100	83.991	Colobus_angolensis_palliatus
ENSPLAG00000018459	snd1	96	83.982	ENSCGRG00001022514	Snd1	98	85.570	Cricetulus_griseus_chok1gshd
ENSPLAG00000018459	snd1	94	84.086	ENSCGRG00000012277	Snd1	99	84.086	Cricetulus_griseus_crigri
ENSPLAG00000018459	snd1	97	93.853	ENSCSEG00000008661	snd1	100	93.853	Cynoglossus_semilaevis
ENSPLAG00000018459	snd1	97	97.146	ENSCVAG00000010316	snd1	100	97.146	Cyprinodon_variegatus
ENSPLAG00000018459	snd1	97	89.157	ENSDARG00000006766	snd1	100	89.157	Danio_rerio
ENSPLAG00000018459	snd1	95	82.677	ENSDNOG00000006795	SND1	100	82.677	Dasypus_novemcinctus
ENSPLAG00000018459	snd1	96	84.427	ENSDORG00000000336	Snd1	100	83.553	Dipodomys_ordii
ENSPLAG00000018459	snd1	96	50.271	FBgn0035121	Tudor-SN	99	49.467	Drosophila_melanogaster
ENSPLAG00000018459	snd1	87	88.889	ENSETEG00000000375	SND1	92	88.889	Echinops_telfairi
ENSPLAG00000018459	snd1	59	66.846	ENSEBUG00000014201	-	84	76.630	Eptatretus_burgeri
ENSPLAG00000018459	snd1	96	83.260	ENSEASG00005008513	SND1	100	82.416	Equus_asinus_asinus
ENSPLAG00000018459	snd1	96	84.427	ENSECAG00000011451	SND1	100	83.443	Equus_caballus
ENSPLAG00000018459	snd1	96	74.972	ENSEEUG00000014737	SND1	100	74.232	Erinaceus_europaeus
ENSPLAG00000018459	snd1	99	86.596	ENSELUG00000001805	snd1	99	86.596	Esox_lucius
ENSPLAG00000018459	snd1	97	83.772	ENSFCAG00000008289	SND1	100	83.772	Felis_catus
ENSPLAG00000018459	snd1	95	84.340	ENSFDAG00000015881	SND1	100	83.333	Fukomys_damarensis
ENSPLAG00000018459	snd1	97	94.844	ENSFHEG00000004093	snd1	99	96.473	Fundulus_heteroclitus
ENSPLAG00000018459	snd1	73	83.616	ENSGMOG00000018932	snd1	66	83.616	Gadus_morhua
ENSPLAG00000018459	snd1	97	98.683	ENSGAFG00000008421	snd1	100	98.683	Gambusia_affinis
ENSPLAG00000018459	snd1	97	61.171	ENSGACG00000019793	snd1	100	61.171	Gasterosteus_aculeatus
ENSPLAG00000018459	snd1	96	84.872	ENSGGOG00000009614	SND1	100	83.991	Gorilla_gorilla
ENSPLAG00000018459	snd1	97	94.841	ENSHBUG00000019135	snd1	100	94.841	Haplochromis_burtoni
ENSPLAG00000018459	snd1	96	84.205	ENSHGLG00000003618	SND1	98	85.738	Heterocephalus_glaber_female
ENSPLAG00000018459	snd1	96	84.205	ENSHGLG00100012449	SND1	99	84.205	Heterocephalus_glaber_male
ENSPLAG00000018459	snd1	97	92.316	ENSHCOG00000005266	snd1	100	92.316	Hippocampus_comes
ENSPLAG00000018459	snd1	97	88.364	ENSIPUG00000013279	snd1	99	88.364	Ictalurus_punctatus
ENSPLAG00000018459	snd1	96	84.650	ENSSTOG00000002140	SND1	100	83.772	Ictidomys_tridecemlineatus
ENSPLAG00000018459	snd1	96	84.538	ENSJJAG00000009561	Snd1	100	83.662	Jaculus_jaculus
ENSPLAG00000018459	snd1	97	96.707	ENSKMAG00000016997	snd1	100	96.707	Kryptolebias_marmoratus
ENSPLAG00000018459	snd1	97	93.963	ENSLBEG00000013563	snd1	100	93.963	Labrus_bergylta
ENSPLAG00000018459	snd1	96	88.852	ENSLOCG00000015537	snd1	99	88.017	Lepisosteus_oculatus
ENSPLAG00000018459	snd1	97	83.882	ENSLAFG00000009696	SND1	100	83.882	Loxodonta_africana
ENSPLAG00000018459	snd1	96	84.872	ENSMFAG00000038114	SND1	100	83.991	Macaca_fascicularis
ENSPLAG00000018459	snd1	96	84.872	ENSMMUG00000015432	SND1	100	83.991	Macaca_mulatta
ENSPLAG00000018459	snd1	96	84.872	ENSMNEG00000039808	SND1	100	85.006	Macaca_nemestrina
ENSPLAG00000018459	snd1	96	84.761	ENSMLEG00000029040	SND1	100	84.893	Mandrillus_leucophaeus
ENSPLAG00000018459	snd1	97	94.292	ENSMAMG00000011739	snd1	100	94.292	Mastacembelus_armatus
ENSPLAG00000018459	snd1	97	94.951	ENSMZEG00005005681	snd1	100	94.951	Maylandia_zebra
ENSPLAG00000018459	snd1	96	84.761	ENSMICG00000000097	SND1	100	83.882	Microcebus_murinus
ENSPLAG00000018459	snd1	96	84.538	ENSMOCG00000005040	Snd1	100	83.662	Microtus_ochrogaster
ENSPLAG00000018459	snd1	97	94.182	ENSMMOG00000001795	snd1	100	94.182	Mola_mola
ENSPLAG00000018459	snd1	96	83.871	ENSMODG00000015182	SND1	100	83.004	Monodelphis_domestica
ENSPLAG00000018459	snd1	97	94.621	ENSMALG00000012071	snd1	100	94.621	Monopterus_albus
ENSPLAG00000018459	snd1	95	84.228	MGP_CAROLIEiJ_G0028159	Snd1	99	85.546	Mus_caroli
ENSPLAG00000018459	snd1	95	84.004	ENSMUSG00000001424	Snd1	100	83.004	Mus_musculus
ENSPLAG00000018459	snd1	95	84.228	MGP_PahariEiJ_G0021917	Snd1	100	85.546	Mus_pahari
ENSPLAG00000018459	snd1	95	84.228	MGP_SPRETEiJ_G0029159	Snd1	100	83.224	Mus_spretus
ENSPLAG00000018459	snd1	97	83.882	ENSMPUG00000006545	SND1	100	83.443	Mustela_putorius_furo
ENSPLAG00000018459	snd1	94	83.724	ENSMLUG00000017130	SND1	99	83.055	Myotis_lucifugus
ENSPLAG00000018459	snd1	96	84.427	ENSNGAG00000011186	Snd1	100	83.553	Nannospalax_galili
ENSPLAG00000018459	snd1	97	94.951	ENSNBRG00000006681	snd1	100	94.951	Neolamprologus_brichardi
ENSPLAG00000018459	snd1	97	83.991	ENSNLEG00000012263	SND1	99	86.218	Nomascus_leucogenys
ENSPLAG00000018459	snd1	88	88.889	ENSOPRG00000013405	SND1	92	88.889	Ochotona_princeps
ENSPLAG00000018459	snd1	96	84.650	ENSODEG00000011502	SND1	99	84.650	Octodon_degus
ENSPLAG00000018459	snd1	99	92.956	ENSONIG00000011481	snd1	99	92.956	Oreochromis_niloticus
ENSPLAG00000018459	snd1	95	83.708	ENSOANG00000000817	SND1	99	82.418	Ornithorhynchus_anatinus
ENSPLAG00000018459	snd1	97	83.077	ENSOCUG00000001620	SND1	99	83.077	Oryctolagus_cuniculus
ENSPLAG00000018459	snd1	97	93.853	ENSORLG00000015201	snd1	100	93.853	Oryzias_latipes
ENSPLAG00000018459	snd1	97	94.072	ENSORLG00020013991	snd1	100	94.072	Oryzias_latipes_hni
ENSPLAG00000018459	snd1	97	94.072	ENSORLG00015012436	snd1	100	94.072	Oryzias_latipes_hsok
ENSPLAG00000018459	snd1	97	94.402	ENSOMEG00000006406	snd1	100	94.402	Oryzias_melastigma
ENSPLAG00000018459	snd1	96	84.684	ENSOGAG00000013356	SND1	95	83.388	Otolemur_garnettii
ENSPLAG00000018459	snd1	95	82.413	ENSOARG00000002149	SND1	100	82.413	Ovis_aries
ENSPLAG00000018459	snd1	96	84.761	ENSPPAG00000042947	SND1	100	83.882	Pan_paniscus
ENSPLAG00000018459	snd1	97	83.772	ENSPPRG00000004494	SND1	100	83.772	Panthera_pardus
ENSPLAG00000018459	snd1	97	83.662	ENSPTIG00000014214	SND1	100	83.662	Panthera_tigris_altaica
ENSPLAG00000018459	snd1	96	84.761	ENSPTRG00000023911	SND1	100	83.882	Pan_troglodytes
ENSPLAG00000018459	snd1	94	84.989	ENSPANG00000011997	SND1	99	84.989	Papio_anubis
ENSPLAG00000018459	snd1	96	86.439	ENSPKIG00000023494	snd1	99	85.823	Paramormyrops_kingsleyae
ENSPLAG00000018459	snd1	89	93.780	ENSPMGG00000003629	snd1	100	93.780	Periophthalmus_magnuspinnatus
ENSPLAG00000018459	snd1	96	84.316	ENSPEMG00000010240	Snd1	100	83.443	Peromyscus_maniculatus_bairdii
ENSPLAG00000018459	snd1	94	74.153	ENSPMAG00000007915	-	99	74.041	Petromyzon_marinus
ENSPLAG00000018459	snd1	96	84.427	ENSPCIG00000011561	SND1	100	83.553	Phascolarctos_cinereus
ENSPLAG00000018459	snd1	97	99.780	ENSPFOG00000001557	snd1	100	99.780	Poecilia_formosa
ENSPLAG00000018459	snd1	97	99.561	ENSPMEG00000006803	snd1	100	99.561	Poecilia_mexicana
ENSPLAG00000018459	snd1	97	98.683	ENSPREG00000002189	snd1	100	98.683	Poecilia_reticulata
ENSPLAG00000018459	snd1	88	88.889	ENSPPYG00000017972	SND1	99	88.889	Pongo_abelii
ENSPLAG00000018459	snd1	96	74.416	ENSPCAG00000011305	SND1	100	73.684	Procavia_capensis
ENSPLAG00000018459	snd1	96	84.872	ENSPCOG00000026791	SND1	100	85.006	Propithecus_coquereli
ENSPLAG00000018459	snd1	96	82.425	ENSPVAG00000013945	SND1	100	81.579	Pteropus_vampyrus
ENSPLAG00000018459	snd1	97	94.841	ENSPNYG00000000932	snd1	100	94.841	Pundamilia_nyererei
ENSPLAG00000018459	snd1	97	90.659	ENSPNAG00000001206	snd1	99	90.659	Pygocentrus_nattereri
ENSPLAG00000018459	snd1	95	84.116	ENSRNOG00000031173	Snd1	99	83.982	Rattus_norvegicus
ENSPLAG00000018459	snd1	68	88.390	ENSRBIG00000027782	-	93	88.447	Rhinopithecus_bieti
ENSPLAG00000018459	snd1	96	84.872	ENSRROG00000033020	SND1	100	83.991	Rhinopithecus_roxellana
ENSPLAG00000018459	snd1	96	84.427	ENSSBOG00000032461	SND1	100	83.553	Saimiri_boliviensis_boliviensis
ENSPLAG00000018459	snd1	95	81.011	ENSSHAG00000015359	SND1	100	81.011	Sarcophilus_harrisii
ENSPLAG00000018459	snd1	95	88.248	ENSSFOG00015001103	snd1	99	87.364	Scleropages_formosus
ENSPLAG00000018459	snd1	99	92.636	ENSSMAG00000001932	snd1	97	92.636	Scophthalmus_maximus
ENSPLAG00000018459	snd1	99	94.427	ENSSDUG00000002699	snd1	96	94.427	Seriola_dumerili
ENSPLAG00000018459	snd1	97	88.364	ENSSLDG00000001950	snd1	100	88.364	Seriola_lalandi_dorsalis
ENSPLAG00000018459	snd1	84	80.412	ENSSARG00000004877	SND1	92	80.412	Sorex_araneus
ENSPLAG00000018459	snd1	69	80.442	ENSSPUG00000017586	SND1	97	80.442	Sphenodon_punctatus
ENSPLAG00000018459	snd1	71	95.093	ENSSPAG00000021398	snd1	99	95.093	Stegastes_partitus
ENSPLAG00000018459	snd1	96	84.316	ENSSSCG00000016590	SND1	100	83.443	Sus_scrofa
ENSPLAG00000018459	snd1	97	93.456	ENSTRUG00000014067	snd1	100	92.316	Takifugu_rubripes
ENSPLAG00000018459	snd1	97	93.085	ENSTNIG00000011019	snd1	100	93.085	Tetraodon_nigroviridis
ENSPLAG00000018459	snd1	91	79.059	ENSTBEG00000003999	SND1	100	79.059	Tupaia_belangeri
ENSPLAG00000018459	snd1	96	80.200	ENSTTRG00000006059	SND1	100	79.386	Tursiops_truncatus
ENSPLAG00000018459	snd1	65	77.285	ENSUAMG00000002820	-	89	77.285	Ursus_americanus
ENSPLAG00000018459	snd1	85	83.270	ENSUAMG00000005604	-	93	83.270	Ursus_americanus
ENSPLAG00000018459	snd1	97	83.662	ENSUMAG00000005960	SND1	100	83.662	Ursus_maritimus
ENSPLAG00000018459	snd1	75	88.889	ENSVPAG00000008302	SND1	74	88.889	Vicugna_pacos
ENSPLAG00000018459	snd1	97	83.772	ENSVVUG00000007226	SND1	100	83.772	Vulpes_vulpes
ENSPLAG00000018459	snd1	94	80.158	ENSXETG00000023043	snd1	100	80.023	Xenopus_tropicalis
ENSPLAG00000018459	snd1	90	95.487	ENSXCOG00000013629	snd1	99	95.487	Xiphophorus_couchianus
ENSPLAG00000018459	snd1	97	98.793	ENSXMAG00000011469	snd1	100	98.793	Xiphophorus_maculatus