EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPLAG00000018465 (Gene tree)
Gene ID
106941509
Gene Symbol
patl1
Alias
-
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Plus strand
Length
20448 bases
Position
chrKQ548934.1:18245-38692
Accession
106941509
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000014713PAT1PF09770.95.4e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000023112-2735XM_015024559ENSPLAP00000014713797 (aa)XP_014880045UPI00072DF3D4
Gene Model
Click here to download ENSPLAG00000018465's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000018465's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000018465patl15038.235ENSG00000229474PATL29939.071Homo_sapiens
ENSPLAG00000018465patl17650.076ENSG00000166889PATL15553.444Homo_sapiens
ENSPLAG00000018465patl15136.557ENSAPOG00000022988patl25837.000Acanthochromis_polyacanthus
ENSPLAG00000018465patl19978.643ENSAPOG00000021290patl19979.523Acanthochromis_polyacanthus
ENSPLAG00000018465patl17650.606ENSAMEG00000014215PATL15553.682Ailuropoda_melanoleuca
ENSPLAG00000018465patl15037.438ENSAMEG00000014997PATL27537.750Ailuropoda_melanoleuca
ENSPLAG00000018465patl19978.250ENSACIG00000005182patl19979.548Amphilophus_citrinellus
ENSPLAG00000018465patl19482.034ENSAOCG00000021993patl19580.971Amphiprion_ocellaris
ENSPLAG00000018465patl15135.363ENSAOCG00000023738patl25136.020Amphiprion_ocellaris
ENSPLAG00000018465patl19983.092ENSAPEG00000021391patl110083.957Amphiprion_percula
ENSPLAG00000018465patl15135.294ENSAPEG00000011299patl26135.949Amphiprion_percula
ENSPLAG00000018465patl110080.194ENSATEG00000002230patl110080.923Anabas_testudineus
ENSPLAG00000018465patl15136.000ENSATEG00000019567patl26036.776Anabas_testudineus
ENSPLAG00000018465patl15836.756ENSAPLG00000003980PATL26440.250Anas_platyrhynchos
ENSPLAG00000018465patl15348.283ENSAPLG00000013394PATL16454.114Anas_platyrhynchos
ENSPLAG00000018465patl17151.118ENSACAG00000006607PATL15552.830Anolis_carolinensis
ENSPLAG00000018465patl17650.076ENSANAG00000023078PATL15553.444Aotus_nancymaae
ENSPLAG00000018465patl110083.112ENSACLG00000005144patl110082.750Astatotilapia_calliptera
ENSPLAG00000018465patl15136.451ENSACLG00000010326patl25337.121Astatotilapia_calliptera
ENSPLAG00000018465patl15084.211ENSAMXG00000010731patl15485.750Astyanax_mexicanus
ENSPLAG00000018465patl15339.002ENSAMXG00000020293patl25739.750Astyanax_mexicanus
ENSPLAG00000018465patl17650.606ENSBTAG00000005913PATL15553.682Bos_taurus
ENSPLAG00000018465patl17650.076ENSCJAG00000016192PATL15553.444Callithrix_jacchus
ENSPLAG00000018465patl15336.261ENSCJAG00000002379PATL27237.500Callithrix_jacchus
ENSPLAG00000018465patl17650.758ENSCAFG00000007581PATL15553.919Canis_familiaris
ENSPLAG00000018465patl15038.107ENSCAFG00000013629PATL27338.308Canis_familiaris
ENSPLAG00000018465patl15038.107ENSCAFG00020022169PATL27238.308Canis_lupus_dingo
ENSPLAG00000018465patl110043.009ENSCAFG00020001648PATL15753.919Canis_lupus_dingo
ENSPLAG00000018465patl15338.864ENSCHIG00000026665PATL27439.655Capra_hircus
ENSPLAG00000018465patl110041.852ENSCHIG00000025913PATL16366.667Capra_hircus
ENSPLAG00000018465patl15337.246ENSTSYG00000032456PATL27237.965Carlito_syrichta
ENSPLAG00000018465patl17550.917ENSTSYG00000012748PATL15454.808Carlito_syrichta
ENSPLAG00000018465patl19749.547ENSCAPG00000013668PATL18952.133Cavia_aperea
ENSPLAG00000018465patl19748.088ENSCPOG00000006827PATL18752.133Cavia_porcellus
ENSPLAG00000018465patl17650.076ENSCCAG00000023759PATL15553.444Cebus_capucinus
ENSPLAG00000018465patl17650.076ENSCATG00000009629PATL15553.444Cercocebus_atys
ENSPLAG00000018465patl17649.469ENSCLAG00000003427PATL15552.257Chinchilla_lanigera
ENSPLAG00000018465patl15036.124ENSCLAG00000014407PATL27337.922Chinchilla_lanigera
ENSPLAG00000018465patl17650.076ENSCSAG00000006095PATL16153.444Chlorocebus_sabaeus
ENSPLAG00000018465patl16358.000ENSCHOG00000001611PATL18358.000Choloepus_hoffmanni
ENSPLAG00000018465patl15139.663ENSCPBG00000006150PATL26039.552Chrysemys_picta_bellii
ENSPLAG00000018465patl15337.045ENSCANG00000013856PATL27238.462Colobus_angolensis_palliatus
ENSPLAG00000018465patl17650.076ENSCANG00000039197PATL15553.444Colobus_angolensis_palliatus
ENSPLAG00000018465patl17550.989ENSCGRG00001024927Patl15553.682Cricetulus_griseus_chok1gshd
ENSPLAG00000018465patl17550.989ENSCGRG00000000461Patl15553.682Cricetulus_griseus_crigri
ENSPLAG00000018465patl15233.796ENSCSEG00000009438patl25734.430Cynoglossus_semilaevis
ENSPLAG00000018465patl110077.911ENSCSEG00000008261patl110080.432Cynoglossus_semilaevis
ENSPLAG00000018465patl19087.478ENSCVAG00000006664patl19987.478Cyprinodon_variegatus
ENSPLAG00000018465patl15133.729ENSCVAG00000016203patl26034.430Cyprinodon_variegatus
ENSPLAG00000018465patl110072.264ENSDARG00000017423patl15283.920Danio_rerio
ENSPLAG00000018465patl19345.152ENSDNOG00000038865PATL17652.732Dasypus_novemcinctus
ENSPLAG00000018465patl17649.621ENSDORG00000000237Patl15552.732Dipodomys_ordii
ENSPLAG00000018465patl110044.048ENSEASG00005007963PATL110043.765Equus_asinus_asinus
ENSPLAG00000018465patl15335.469ENSEASG00005017984PATL27136.160Equus_asinus_asinus
ENSPLAG00000018465patl17650.453ENSECAG00000011411PATL15553.919Equus_caballus
ENSPLAG00000018465patl15336.530ENSECAG00000013462PATL27237.313Equus_caballus
ENSPLAG00000018465patl110072.906ENSELUG00000024249patl110072.439Esox_lucius
ENSPLAG00000018465patl16134.257ENSELUG00000023244patl25437.531Esox_lucius
ENSPLAG00000018465patl17650.531ENSFCAG00000015573PATL15553.682Felis_catus
ENSPLAG00000018465patl15337.900ENSFCAG00000027170PATL27338.806Felis_catus
ENSPLAG00000018465patl19946.644ENSFALG00000012150PATL17255.687Ficedula_albicollis
ENSPLAG00000018465patl16134.387ENSFALG00000009768PATL25538.035Ficedula_albicollis
ENSPLAG00000018465patl17650.305ENSFDAG00000016128PATL15553.318Fukomys_damarensis
ENSPLAG00000018465patl19988.778ENSFHEG00000017790patl110089.027Fundulus_heteroclitus
ENSPLAG00000018465patl15135.892ENSGMOG00000005666patl210036.650Gadus_morhua
ENSPLAG00000018465patl15635.608ENSGALG00000002167PATL25038.119Gallus_gallus
ENSPLAG00000018465patl19149.849ENSGALG00000042641PATL16855.024Gallus_gallus
ENSPLAG00000018465patl15235.581ENSGAFG00000019344patl25636.500Gambusia_affinis
ENSPLAG00000018465patl110095.885ENSGAFG00000006508patl110095.885Gambusia_affinis
ENSPLAG00000018465patl19971.429ENSGACG00000016448patl15387.786Gasterosteus_aculeatus
ENSPLAG00000018465patl110045.338ENSGAGG00000004461PATL17654.265Gopherus_agassizii
ENSPLAG00000018465patl19942.112ENSGGOG00000004335PATL15653.976Gorilla_gorilla
ENSPLAG00000018465patl15337.528ENSGGOG00000025923PATL27238.971Gorilla_gorilla
ENSPLAG00000018465patl15136.603ENSHBUG00000005929patl26036.869Haplochromis_burtoni
ENSPLAG00000018465patl110083.112ENSHBUG00000005365patl110082.750Haplochromis_burtoni
ENSPLAG00000018465patl17650.076ENSHGLG00000018173PATL15552.019Heterocephalus_glaber_female
ENSPLAG00000018465patl18256.452ENSHGLG00100003453PATL16262.500Heterocephalus_glaber_male
ENSPLAG00000018465patl110075.783ENSHCOG00000001898patl110076.145Hippocampus_comes
ENSPLAG00000018465patl15135.597ENSHCOG00000016754patl25436.020Hippocampus_comes
ENSPLAG00000018465patl15835.108ENSIPUG00000020692patl25638.500Ictalurus_punctatus
ENSPLAG00000018465patl15337.246ENSSTOG00000033848PATL27238.916Ictidomys_tridecemlineatus
ENSPLAG00000018465patl17650.835ENSSTOG00000013764PATL15553.919Ictidomys_tridecemlineatus
ENSPLAG00000018465patl17649.848ENSJJAG00000010135Patl15552.607Jaculus_jaculus
ENSPLAG00000018465patl110085.266ENSKMAG00000020848patl110084.485Kryptolebias_marmoratus
ENSPLAG00000018465patl110081.588ENSLBEG00000023617patl110082.812Labrus_bergylta
ENSPLAG00000018465patl15237.327ENSLBEG00000022344patl25338.131Labrus_bergylta
ENSPLAG00000018465patl17867.273ENSLACG00000004640PATL16370.833Latimeria_chalumnae
ENSPLAG00000018465patl110061.576ENSLOCG00000000717patl110062.364Lepisosteus_oculatus
ENSPLAG00000018465patl15136.512ENSLAFG00000031124PATL27138.601Loxodonta_africana
ENSPLAG00000018465patl17650.835ENSLAFG00000015161PATL15553.810Loxodonta_africana
ENSPLAG00000018465patl17650.076ENSMFAG00000040851PATL15553.444Macaca_fascicularis
ENSPLAG00000018465patl17650.076ENSMMUG00000017287PATL15553.444Macaca_mulatta
ENSPLAG00000018465patl17650.076ENSMNEG00000038692PATL15553.444Macaca_nemestrina
ENSPLAG00000018465patl17650.228ENSMLEG00000030044PATL15553.444Mandrillus_leucophaeus
ENSPLAG00000018465patl110079.543ENSMAMG00000003950patl110080.626Mastacembelus_armatus
ENSPLAG00000018465patl15136.277ENSMAMG00000013327patl26037.374Mastacembelus_armatus
ENSPLAG00000018465patl110083.112ENSMZEG00005013404patl110082.750Maylandia_zebra
ENSPLAG00000018465patl15136.451ENSMZEG00005014292patl25337.121Maylandia_zebra
ENSPLAG00000018465patl18549.010ENSMGAG00000003406PATL16753.279Meleagris_gallopavo
ENSPLAG00000018465patl15535.931ENSMGAG00000001309PATL26438.806Meleagris_gallopavo
ENSPLAG00000018465patl17544.479ENSMAUG00000012059Patl17356.494Mesocricetus_auratus
ENSPLAG00000018465patl15036.124ENSMAUG00000001008Patl27536.543Mesocricetus_auratus
ENSPLAG00000018465patl17547.248ENSMICG00000004172PATL15248.916Microcebus_murinus
ENSPLAG00000018465patl15436.142ENSMOCG00000015367Patl27237.975Microtus_ochrogaster
ENSPLAG00000018465patl17550.989ENSMOCG00000010087Patl15553.682Microtus_ochrogaster
ENSPLAG00000018465patl17896.552ENSMMOG00000013711patl16596.552Mola_mola
ENSPLAG00000018465patl15338.377ENSMODG00000017690PATL27139.423Monodelphis_domestica
ENSPLAG00000018465patl17650.597ENSMODG00000020201PATL15555.107Monodelphis_domestica
ENSPLAG00000018465patl19572.775ENSMALG00000018706patl15589.785Monopterus_albus
ENSPLAG00000018465patl17650.683MGP_CAROLIEiJ_G0022739Patl15553.919Mus_caroli
ENSPLAG00000018465patl17650.683ENSMUSG00000046139Patl15553.919Mus_musculus
ENSPLAG00000018465patl17650.683MGP_PahariEiJ_G0014233Patl15553.682Mus_pahari
ENSPLAG00000018465patl17650.683MGP_SPRETEiJ_G0023652Patl15553.919Mus_spretus
ENSPLAG00000018465patl17650.909ENSMPUG00000014607PATL15553.919Mustela_putorius_furo
ENSPLAG00000018465patl110043.128ENSMLUG00000011169PATL15652.969Myotis_lucifugus
ENSPLAG00000018465patl17649.924ENSNGAG00000003682Patl15453.444Nannospalax_galili
ENSPLAG00000018465patl15136.842ENSNBRG00000011745patl25737.280Neolamprologus_brichardi
ENSPLAG00000018465patl16973.604ENSNBRG00000015372patl19355.753Neolamprologus_brichardi
ENSPLAG00000018465patl15038.235ENSNLEG00000005673PATL27338.670Nomascus_leucogenys
ENSPLAG00000018465patl19349.377ENSNLEG00000013081PATL15653.976Nomascus_leucogenys
ENSPLAG00000018465patl16057.051ENSMEUG00000009391PATL17457.051Notamacropus_eugenii
ENSPLAG00000018465patl16254.907ENSOPRG00000007963PATL17654.907Ochotona_princeps
ENSPLAG00000018465patl15348.325ENSODEG00000001792PATL17054.037Octodon_degus
ENSPLAG00000018465patl110082.971ENSONIG00000004170patl110083.937Oreochromis_niloticus
ENSPLAG00000018465patl17650.986ENSOCUG00000002156PATL15553.682Oryctolagus_cuniculus
ENSPLAG00000018465patl15434.664ENSOCUG00000006339PATL27537.000Oryctolagus_cuniculus
ENSPLAG00000018465patl15135.897ENSORLG00000005780patl25436.341Oryzias_latipes
ENSPLAG00000018465patl15135.897ENSORLG00020016506patl25236.341Oryzias_latipes_hni
ENSPLAG00000018465patl17584.158ENSORLG00015022240patl110073.848Oryzias_latipes_hsok
ENSPLAG00000018465patl15135.897ENSORLG00015014500patl25436.341Oryzias_latipes_hsok
ENSPLAG00000018465patl15036.098ENSOMEG00000021628patl25635.354Oryzias_melastigma
ENSPLAG00000018465patl15436.508ENSOGAG00000004709PATL27237.531Otolemur_garnettii
ENSPLAG00000018465patl17650.076ENSOGAG00000004351PATL15553.444Otolemur_garnettii
ENSPLAG00000018465patl15237.644ENSOARG00000003762PATL27238.847Ovis_aries
ENSPLAG00000018465patl17650.681ENSOARG00000012005PATL15353.555Ovis_aries
ENSPLAG00000018465patl15337.246ENSPPAG00000007221PATL27238.670Pan_paniscus
ENSPLAG00000018465patl110041.932ENSPPAG00000034275PATL15653.444Pan_paniscus
ENSPLAG00000018465patl15337.215ENSPPRG00000004279PATL27338.060Panthera_pardus
ENSPLAG00000018465patl17650.531ENSPPRG00000020639PATL15553.682Panthera_pardus
ENSPLAG00000018465patl15337.215ENSPTIG00000018964PATL27338.060Panthera_tigris_altaica
ENSPLAG00000018465patl17650.531ENSPTIG00000019298PATL15553.682Panthera_tigris_altaica
ENSPLAG00000018465patl15038.235ENSPTRG00000041536PATL27238.670Pan_troglodytes
ENSPLAG00000018465patl17546.749ENSPTRG00000003697PATL18342.681Pan_troglodytes
ENSPLAG00000018465patl17650.076ENSPANG00000035620PATL15553.444Papio_anubis
ENSPLAG00000018465patl110072.705ENSPKIG00000016224patl110072.311Paramormyrops_kingsleyae
ENSPLAG00000018465patl19451.667ENSPSIG00000016206PATL16065.000Pelodiscus_sinensis
ENSPLAG00000018465patl110079.336ENSPMGG00000002644patl15289.673Periophthalmus_magnuspinnatus
ENSPLAG00000018465patl15633.263ENSPMGG00000014550patl26234.848Periophthalmus_magnuspinnatus
ENSPLAG00000018465patl15235.666ENSPEMG00000016509Patl27137.922Peromyscus_maniculatus_bairdii
ENSPLAG00000018465patl17550.608ENSPEMG00000014215Patl15553.081Peromyscus_maniculatus_bairdii
ENSPLAG00000018465patl15138.810ENSPCIG00000018256PATL27639.394Phascolarctos_cinereus
ENSPLAG00000018465patl110045.843ENSPCIG00000010852PATL15554.374Phascolarctos_cinereus
ENSPLAG00000018465patl110095.609ENSPFOG00000007768patl110099.588Poecilia_formosa
ENSPLAG00000018465patl110099.247ENSPMEG00000006555patl110099.247Poecilia_mexicana
ENSPLAG00000018465patl18995.927ENSPREG00000003874patl19595.787Poecilia_reticulata
ENSPLAG00000018465patl17650.379ENSPPYG00000003230PATL15553.919Pongo_abelii
ENSPLAG00000018465patl17650.152ENSPCOG00000020770PATL15753.682Propithecus_coquereli
ENSPLAG00000018465patl15337.611ENSPCOG00000000295PATL29939.572Propithecus_coquereli
ENSPLAG00000018465patl17648.777ENSPVAG00000015239PATL16350.483Pteropus_vampyrus
ENSPLAG00000018465patl19090.093ENSPNYG00000018936patl19989.846Pundamilia_nyererei
ENSPLAG00000018465patl15136.298ENSPNYG00000017381patl26036.616Pundamilia_nyererei
ENSPLAG00000018465patl15338.444ENSPNAG00000002315patl25740.100Pygocentrus_nattereri
ENSPLAG00000018465patl110074.257ENSPNAG00000017907patl15184.962Pygocentrus_nattereri
ENSPLAG00000018465patl17650.606ENSRNOG00000021052Patl15553.318Rattus_norvegicus
ENSPLAG00000018465patl110038.031ENSRBIG00000032263PATL16366.667Rhinopithecus_bieti
ENSPLAG00000018465patl17650.076ENSRROG00000032861PATL15553.444Rhinopithecus_roxellana
ENSPLAG00000018465patl110041.716ENSSBOG00000025195PATL15653.664Saimiri_boliviensis_boliviensis
ENSPLAG00000018465patl110045.968ENSSHAG00000004309PATL15554.846Sarcophilus_harrisii
ENSPLAG00000018465patl110071.891ENSSFOG00015009614patl110072.761Scleropages_formosus
ENSPLAG00000018465patl15135.952ENSSMAG00000017262patl26336.456Scophthalmus_maximus
ENSPLAG00000018465patl110079.567ENSSMAG00000009482patl110081.250Scophthalmus_maximus
ENSPLAG00000018465patl15137.089ENSSDUG00000022927patl25437.879Seriola_dumerili
ENSPLAG00000018465patl110079.335ENSSDUG00000005362patl110081.235Seriola_dumerili
ENSPLAG00000018465patl110079.191ENSSLDG00000019146patl110081.094Seriola_lalandi_dorsalis
ENSPLAG00000018465patl15137.176ENSSLDG00000017922patl25937.374Seriola_lalandi_dorsalis
ENSPLAG00000018465patl15950.847ENSSARG00000009600PATL15554.632Sorex_araneus
ENSPLAG00000018465patl17551.920ENSSPUG00000009453PATL17355.450Sphenodon_punctatus
ENSPLAG00000018465patl15135.461ENSSPAG00000004784patl26136.272Stegastes_partitus
ENSPLAG00000018465patl19979.523ENSSPAG00000003187patl19979.699Stegastes_partitus
ENSPLAG00000018465patl17650.455ENSSSCG00000013124PATL16353.919Sus_scrofa
ENSPLAG00000018465patl19946.012ENSTGUG00000006222PATL15556.057Taeniopygia_guttata
ENSPLAG00000018465patl110069.434ENSTRUG00000000709patl110069.212Takifugu_rubripes
ENSPLAG00000018465patl16648.758ENSTBEG00000000796PATL15456.410Tupaia_belangeri
ENSPLAG00000018465patl16555.128ENSTTRG00000009389PATL18055.128Tursiops_truncatus
ENSPLAG00000018465patl15037.226ENSUAMG00000018533PATL27137.531Ursus_americanus
ENSPLAG00000018465patl15037.226ENSUMAG00000007738PATL27137.531Ursus_maritimus
ENSPLAG00000018465patl17750.000ENSUMAG00000018634PATL16153.682Ursus_maritimus
ENSPLAG00000018465patl17650.758ENSVVUG00000016668PATL16053.919Vulpes_vulpes
ENSPLAG00000018465patl15038.406ENSVVUG00000011576PATL27338.308Vulpes_vulpes
ENSPLAG00000018465patl17196.610ENSXCOG00000010808patl110096.610Xiphophorus_couchianus
ENSPLAG00000018465patl110096.259ENSXMAG00000013834patl110096.259Xiphophorus_maculatus

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