EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000018616 (Gene tree)
Gene ID: 106959178
Gene Symbol: -
Alias: -
Full Name: transcription activator BRG1-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 21713 bases
Position: chrKQ545319.1:93150-114862
Accession: 106959178
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000014773	ResIII	PF04851.15	1.7e-08	1	1
ENSPLAP00000014773	BRK	PF07533.16	5.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000023202	-	4824	XM_015051597	ENSPLAP00000014773	1607 (aa)	XP_014907083	-

Gene Model

Click here to download ENSPLAG00000018616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000018616's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000018616	-	98	84.843	ENSPLAG00000014294	smarca4a	99	80.868
ENSPLAG00000018616	-	98	71.703	ENSPLAG00000017829	SMARCA2	81	75.557

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000018616	-	81	90.298	ENSG00000127616	SMARCA4	99	95.652	Homo_sapiens
ENSPLAG00000018616	-	95	91.735	ENSAPOG00000004542	SMARCA4	99	93.702	Acanthochromis_polyacanthus
ENSPLAG00000018616	-	77	88.221	ENSAPOG00000003509	smarca4a	98	86.832	Acanthochromis_polyacanthus
ENSPLAG00000018616	-	81	86.224	ENSAMEG00000010868	SMARCA4	83	85.140	Ailuropoda_melanoleuca
ENSPLAG00000018616	-	97	93.170	ENSACIG00000003035	-	99	93.170	Amphilophus_citrinellus
ENSPLAG00000018616	-	98	86.265	ENSACIG00000021550	smarca4a	98	85.954	Amphilophus_citrinellus
ENSPLAG00000018616	-	89	86.022	ENSAOCG00000019167	smarca4a	83	91.610	Amphiprion_ocellaris
ENSPLAG00000018616	-	93	94.772	ENSAOCG00000009450	-	81	97.992	Amphiprion_ocellaris
ENSPLAG00000018616	-	99	91.981	ENSAPEG00000023108	-	88	96.854	Amphiprion_percula
ENSPLAG00000018616	-	89	86.092	ENSAPEG00000015559	smarca4a	83	91.695	Amphiprion_percula
ENSPLAG00000018616	-	98	86.228	ENSATEG00000011524	smarca4a	81	90.957	Anabas_testudineus
ENSPLAG00000018616	-	98	89.704	ENSATEG00000001094	-	86	92.129	Anabas_testudineus
ENSPLAG00000018616	-	98	82.292	ENSANAG00000036991	SMARCA4	79	89.790	Aotus_nancymaae
ENSPLAG00000018616	-	98	87.571	ENSACLG00000000163	smarca4a	98	87.760	Astatotilapia_calliptera
ENSPLAG00000018616	-	95	92.121	ENSACLG00000008638	-	99	92.834	Astatotilapia_calliptera
ENSPLAG00000018616	-	93	88.787	ENSAMXG00000011238	-	84	93.504	Astyanax_mexicanus
ENSPLAG00000018616	-	97	84.694	ENSAMXG00000021023	smarca4a	85	89.016	Astyanax_mexicanus
ENSPLAG00000018616	-	98	83.631	ENSBTAG00000019220	SMARCA4	99	85.016	Bos_taurus
ENSPLAG00000018616	-	95	87.561	ENSCJAG00000005936	SMARCA4	78	90.545	Callithrix_jacchus
ENSPLAG00000018616	-	81	90.527	ENSCAFG00000017584	SMARCA4	82	90.150	Canis_familiaris
ENSPLAG00000018616	-	98	82.622	ENSCAFG00020024620	SMARCA4	96	82.586	Canis_lupus_dingo
ENSPLAG00000018616	-	98	82.181	ENSCHIG00000015318	SMARCA4	99	82.224	Capra_hircus
ENSPLAG00000018616	-	98	86.692	ENSTSYG00000012966	SMARCA4	83	90.075	Carlito_syrichta
ENSPLAG00000018616	-	93	81.246	ENSCAPG00000015932	SMARCA4	88	89.920	Cavia_aperea
ENSPLAG00000018616	-	81	90.756	ENSCPOG00000015549	SMARCA4	82	90.301	Cavia_porcellus
ENSPLAG00000018616	-	81	86.636	ENSCCAG00000031660	SMARCA4	81	86.398	Cebus_capucinus
ENSPLAG00000018616	-	81	90.298	ENSCATG00000029530	SMARCA4	82	89.925	Cercocebus_atys
ENSPLAG00000018616	-	98	86.566	ENSCLAG00000011946	SMARCA4	83	90.226	Chinchilla_lanigera
ENSPLAG00000018616	-	98	84.069	ENSCPBG00000009994	SMARCA4	82	90.233	Chrysemys_picta_bellii
ENSPLAG00000018616	-	98	84.034	ENSCANG00000036013	SMARCA4	83	92.193	Colobus_angolensis_palliatus
ENSPLAG00000018616	-	81	90.374	ENSCGRG00001016732	Smarca4	82	89.925	Cricetulus_griseus_chok1gshd
ENSPLAG00000018616	-	81	90.374	ENSCGRG00000017242	Smarca4	82	89.925	Cricetulus_griseus_crigri
ENSPLAG00000018616	-	95	85.567	ENSCSEG00000014771	smarca4a	99	85.298	Cynoglossus_semilaevis
ENSPLAG00000018616	-	98	85.137	ENSCVAG00000006979	smarca4a	99	85.411	Cyprinodon_variegatus
ENSPLAG00000018616	-	99	95.315	ENSCVAG00000003018	-	99	95.315	Cyprinodon_variegatus
ENSPLAG00000018616	-	97	86.546	ENSDARG00000077226	smarca4a	99	82.492	Danio_rerio
ENSPLAG00000018616	-	91	85.392	ENSDARG00000104339	SMARCA4	81	91.943	Danio_rerio
ENSPLAG00000018616	-	82	83.931	ENSDNOG00000048847	SMARCA4	90	90.899	Dasypus_novemcinctus
ENSPLAG00000018616	-	68	87.626	ENSDORG00000002544	Smarca4	74	88.359	Dipodomys_ordii
ENSPLAG00000018616	-	93	75.630	ENSETEG00000013361	SMARCA4	94	75.000	Echinops_telfairi
ENSPLAG00000018616	-	92	90.374	ENSEASG00005006167	SMARCA4	99	84.237	Equus_asinus_asinus
ENSPLAG00000018616	-	81	90.451	ENSECAG00000008334	SMARCA4	82	89.925	Equus_caballus
ENSPLAG00000018616	-	99	84.805	ENSELUG00000010247	smarca4a	86	88.700	Esox_lucius
ENSPLAG00000018616	-	98	81.589	ENSELUG00000023232	-	86	88.889	Esox_lucius
ENSPLAG00000018616	-	81	90.473	ENSFCAG00000004894	SMARCA4	82	90.023	Felis_catus
ENSPLAG00000018616	-	74	91.541	ENSFALG00000004208	SMARCA4	79	88.792	Ficedula_albicollis
ENSPLAG00000018616	-	74	91.388	ENSFDAG00000012237	SMARCA4	80	91.044	Fukomys_damarensis
ENSPLAG00000018616	-	95	83.544	ENSFHEG00000010182	smarca4a	99	80.671	Fundulus_heteroclitus
ENSPLAG00000018616	-	99	94.786	ENSFHEG00000007902	-	99	94.786	Fundulus_heteroclitus
ENSPLAG00000018616	-	91	79.672	ENSGMOG00000002649	smarca4a	89	83.313	Gadus_morhua
ENSPLAG00000018616	-	92	84.979	ENSGMOG00000005756	-	86	85.185	Gadus_morhua
ENSPLAG00000018616	-	55	92.282	ENSGALG00000047145	SMARCA4	78	91.148	Gallus_gallus
ENSPLAG00000018616	-	88	88.182	ENSGAFG00000014900	smarca4a	91	90.061	Gambusia_affinis
ENSPLAG00000018616	-	99	92.777	ENSGAFG00000008827	-	99	92.839	Gambusia_affinis
ENSPLAG00000018616	-	95	85.064	ENSGACG00000006691	smarca4a	99	83.789	Gasterosteus_aculeatus
ENSPLAG00000018616	-	98	86.044	ENSGACG00000016033	-	99	85.036	Gasterosteus_aculeatus
ENSPLAG00000018616	-	98	84.162	ENSGAGG00000016757	SMARCA4	82	90.361	Gopherus_agassizii
ENSPLAG00000018616	-	81	90.298	ENSGGOG00000009882	SMARCA4	97	82.872	Gorilla_gorilla
ENSPLAG00000018616	-	98	92.495	ENSHBUG00000005447	-	99	93.415	Haplochromis_burtoni
ENSPLAG00000018616	-	98	87.705	ENSHBUG00000021172	smarca4a	99	86.265	Haplochromis_burtoni
ENSPLAG00000018616	-	98	86.248	ENSHGLG00000010519	SMARCA4	82	90.023	Heterocephalus_glaber_female
ENSPLAG00000018616	-	98	86.142	ENSHGLG00100013774	SMARCA4	82	89.288	Heterocephalus_glaber_male
ENSPLAG00000018616	-	95	86.727	ENSHCOG00000009510	smarca4a	96	86.516	Hippocampus_comes
ENSPLAG00000018616	-	98	86.262	ENSIPUG00000006107	smarca4a	99	82.958	Ictalurus_punctatus
ENSPLAG00000018616	-	96	87.316	ENSIPUG00000016346	-	82	92.803	Ictalurus_punctatus
ENSPLAG00000018616	-	81	90.527	ENSSTOG00000007939	SMARCA4	82	90.075	Ictidomys_tridecemlineatus
ENSPLAG00000018616	-	81	88.152	ENSJJAG00000012877	Smarca4	83	87.307	Jaculus_jaculus
ENSPLAG00000018616	-	98	86.553	ENSKMAG00000011931	smarca4a	83	90.634	Kryptolebias_marmoratus
ENSPLAG00000018616	-	96	95.892	ENSKMAG00000019518	-	99	95.892	Kryptolebias_marmoratus
ENSPLAG00000018616	-	95	84.726	ENSLBEG00000017383	smarca4a	97	83.789	Labrus_bergylta
ENSPLAG00000018616	-	96	86.438	ENSLBEG00000020655	-	84	85.991	Labrus_bergylta
ENSPLAG00000018616	-	51	81.010	ENSLACG00000015309	SMARCA4	100	80.338	Latimeria_chalumnae
ENSPLAG00000018616	-	98	84.456	ENSLOCG00000007820	smarca4a	99	83.188	Lepisosteus_oculatus
ENSPLAG00000018616	-	98	84.428	ENSLAFG00000001433	SMARCA4	82	89.947	Loxodonta_africana
ENSPLAG00000018616	-	81	90.298	ENSMFAG00000032146	SMARCA4	81	89.925	Macaca_fascicularis
ENSPLAG00000018616	-	81	90.298	ENSMMUG00000012042	SMARCA4	97	90.094	Macaca_mulatta
ENSPLAG00000018616	-	81	90.298	ENSMNEG00000028512	SMARCA4	82	89.925	Macaca_nemestrina
ENSPLAG00000018616	-	98	83.099	ENSMLEG00000034976	SMARCA4	83	92.193	Mandrillus_leucophaeus
ENSPLAG00000018616	-	98	86.490	ENSMAMG00000009256	smarca4a	99	85.599	Mastacembelus_armatus
ENSPLAG00000018616	-	96	95.103	ENSMAMG00000002841	-	99	95.103	Mastacembelus_armatus
ENSPLAG00000018616	-	98	87.705	ENSMZEG00005003889	smarca4a	98	87.823	Maylandia_zebra
ENSPLAG00000018616	-	95	92.459	ENSMZEG00005023861	-	79	97.941	Maylandia_zebra
ENSPLAG00000018616	-	81	90.244	ENSMAUG00000020731	Smarca4	82	89.722	Mesocricetus_auratus
ENSPLAG00000018616	-	98	82.633	ENSMICG00000009806	SMARCA4	97	80.000	Microcebus_murinus
ENSPLAG00000018616	-	81	89.787	ENSMOCG00000022209	Smarca4	82	89.497	Microtus_ochrogaster
ENSPLAG00000018616	-	95	84.819	ENSMMOG00000007571	smarca4a	98	85.142	Mola_mola
ENSPLAG00000018616	-	81	88.648	ENSMODG00000006287	SMARCA4	82	87.574	Monodelphis_domestica
ENSPLAG00000018616	-	96	86.671	ENSMALG00000003388	smarca4a	84	90.155	Monopterus_albus
ENSPLAG00000018616	-	81	90.222	MGP_CAROLIEiJ_G0031879	Smarca4	94	87.406	Mus_caroli
ENSPLAG00000018616	-	81	90.222	ENSMUSG00000032187	Smarca4	94	87.406	Mus_musculus
ENSPLAG00000018616	-	81	90.222	MGP_PahariEiJ_G0014745	Smarca4	99	86.109	Mus_pahari
ENSPLAG00000018616	-	81	90.222	MGP_SPRETEiJ_G0033003	Smarca4	94	87.406	Mus_spretus
ENSPLAG00000018616	-	81	90.527	ENSMPUG00000005711	SMARCA4	82	90.075	Mustela_putorius_furo
ENSPLAG00000018616	-	81	90.527	ENSMLUG00000004491	-	82	90.075	Myotis_lucifugus
ENSPLAG00000018616	-	98	86.170	ENSNGAG00000021852	Smarca4	82	89.925	Nannospalax_galili
ENSPLAG00000018616	-	95	86.518	ENSNBRG00000011457	smarca4a	81	91.965	Neolamprologus_brichardi
ENSPLAG00000018616	-	89	93.296	ENSNBRG00000018865	-	99	93.366	Neolamprologus_brichardi
ENSPLAG00000018616	-	95	80.520	ENSNLEG00000012389	SMARCA4	96	80.592	Nomascus_leucogenys
ENSPLAG00000018616	-	77	96.552	ENSOPRG00000000885	-	76	96.552	Ochotona_princeps
ENSPLAG00000018616	-	98	84.696	ENSODEG00000017127	SMARCA4	82	89.342	Octodon_degus
ENSPLAG00000018616	-	98	87.713	ENSONIG00000008196	smarca4a	99	87.453	Oreochromis_niloticus
ENSPLAG00000018616	-	98	92.678	ENSONIG00000018040	-	80	97.961	Oreochromis_niloticus
ENSPLAG00000018616	-	97	78.563	ENSOCUG00000001787	SMARCA4	98	79.949	Oryctolagus_cuniculus
ENSPLAG00000018616	-	95	85.345	ENSORLG00000015452	smarca4a	82	90.806	Oryzias_latipes
ENSPLAG00000018616	-	89	95.010	ENSORLG00000003955	-	99	90.128	Oryzias_latipes
ENSPLAG00000018616	-	95	85.087	ENSORLG00020004611	smarca4a	82	90.806	Oryzias_latipes_hni
ENSPLAG00000018616	-	89	94.394	ENSORLG00020009728	-	98	88.067	Oryzias_latipes_hni
ENSPLAG00000018616	-	95	85.023	ENSORLG00015016560	smarca4a	98	83.691	Oryzias_latipes_hsok
ENSPLAG00000018616	-	98	89.010	ENSORLG00015007739	-	98	85.040	Oryzias_latipes_hsok
ENSPLAG00000018616	-	96	90.218	ENSOMEG00000016626	-	81	96.945	Oryzias_melastigma
ENSPLAG00000018616	-	98	85.430	ENSOMEG00000007486	smarca4a	99	85.919	Oryzias_melastigma
ENSPLAG00000018616	-	72	89.983	ENSOGAG00000016148	SMARCA4	81	89.483	Otolemur_garnettii
ENSPLAG00000018616	-	98	83.015	ENSOARG00000017454	SMARCA4	82	90.826	Ovis_aries
ENSPLAG00000018616	-	81	90.298	ENSPPAG00000043191	SMARCA4	82	89.925	Pan_paniscus
ENSPLAG00000018616	-	81	90.473	ENSPPRG00000000064	SMARCA4	82	90.023	Panthera_pardus
ENSPLAG00000018616	-	81	90.298	ENSPTRG00000010488	SMARCA4	82	89.925	Pan_troglodytes
ENSPLAG00000018616	-	81	90.298	ENSPANG00000011042	SMARCA4	83	88.201	Papio_anubis
ENSPLAG00000018616	-	95	88.070	ENSPKIG00000010087	-	96	85.964	Paramormyrops_kingsleyae
ENSPLAG00000018616	-	98	87.376	ENSPKIG00000007770	SMARCA4	99	86.957	Paramormyrops_kingsleyae
ENSPLAG00000018616	-	98	78.903	ENSPSIG00000005547	SMARCA4	85	86.245	Pelodiscus_sinensis
ENSPLAG00000018616	-	81	90.015	ENSPEMG00000020389	Smarca4	82	89.572	Peromyscus_maniculatus_bairdii
ENSPLAG00000018616	-	81	90.819	ENSPCIG00000017138	SMARCA4	82	90.361	Phascolarctos_cinereus
ENSPLAG00000018616	-	99	95.665	ENSPFOG00000012930	-	99	94.358	Poecilia_formosa
ENSPLAG00000018616	-	98	84.658	ENSPFOG00000007892	smarca4a	81	89.691	Poecilia_formosa
ENSPLAG00000018616	-	95	85.605	ENSPMEG00000003725	smarca4a	78	90.845	Poecilia_mexicana
ENSPLAG00000018616	-	100	96.702	ENSPMEG00000008929	-	100	96.702	Poecilia_mexicana
ENSPLAG00000018616	-	100	92.346	ENSPREG00000014823	-	100	92.346	Poecilia_reticulata
ENSPLAG00000018616	-	98	84.310	ENSPREG00000014608	smarca4a	99	84.625	Poecilia_reticulata
ENSPLAG00000018616	-	81	88.077	ENSPPYG00000009568	SMARCA4	83	87.161	Pongo_abelii
ENSPLAG00000018616	-	79	80.795	ENSPCAG00000014054	SMARCA4	77	80.132	Procavia_capensis
ENSPLAG00000018616	-	81	90.527	ENSPCOG00000023011	SMARCA4	82	89.872	Propithecus_coquereli
ENSPLAG00000018616	-	94	80.712	ENSPVAG00000007787	SMARCA4	94	80.038	Pteropus_vampyrus
ENSPLAG00000018616	-	98	86.039	ENSPNYG00000000717	smarca4a	96	86.757	Pundamilia_nyererei
ENSPLAG00000018616	-	96	93.079	ENSPNYG00000023995	-	99	93.144	Pundamilia_nyererei
ENSPLAG00000018616	-	95	88.925	ENSPNAG00000006636	-	79	94.155	Pygocentrus_nattereri
ENSPLAG00000018616	-	81	90.222	ENSRNOG00000009271	Smarca4	82	89.774	Rattus_norvegicus
ENSPLAG00000018616	-	98	83.729	ENSRBIG00000038696	SMARCA4	97	82.872	Rhinopithecus_bieti
ENSPLAG00000018616	-	98	84.095	ENSRROG00000045509	SMARCA4	82	89.925	Rhinopithecus_roxellana
ENSPLAG00000018616	-	83	89.715	ENSSBOG00000026896	SMARCA4	98	81.846	Saimiri_boliviensis_boliviensis
ENSPLAG00000018616	-	81	90.513	ENSSHAG00000001642	SMARCA4	82	90.211	Sarcophilus_harrisii
ENSPLAG00000018616	-	95	84.551	ENSSFOG00015009921	-	91	91.635	Scleropages_formosus
ENSPLAG00000018616	-	98	87.183	ENSSFOG00015013823	smarca4	82	91.370	Scleropages_formosus
ENSPLAG00000018616	-	98	86.679	ENSSMAG00000003200	smarca4a	97	86.869	Scophthalmus_maximus
ENSPLAG00000018616	-	98	88.740	ENSSMAG00000014082	-	87	95.735	Scophthalmus_maximus
ENSPLAG00000018616	-	99	94.626	ENSSDUG00000005388	-	80	97.615	Seriola_dumerili
ENSPLAG00000018616	-	98	83.386	ENSSDUG00000017298	smarca4a	99	83.124	Seriola_dumerili
ENSPLAG00000018616	-	96	95.624	ENSSLDG00000023663	-	99	95.624	Seriola_lalandi_dorsalis
ENSPLAG00000018616	-	98	85.609	ENSSLDG00000024486	smarca4a	99	85.292	Seriola_lalandi_dorsalis
ENSPLAG00000018616	-	62	97.516	ENSSARG00000013477	SMARCA4	82	97.516	Sorex_araneus
ENSPLAG00000018616	-	95	82.357	ENSSPUG00000004558	SMARCA4	80	86.609	Sphenodon_punctatus
ENSPLAG00000018616	-	98	85.651	ENSSPAG00000004248	smarca4a	99	85.415	Stegastes_partitus
ENSPLAG00000018616	-	98	91.516	ENSSPAG00000012533	-	98	91.370	Stegastes_partitus
ENSPLAG00000018616	-	81	90.473	ENSSSCG00000013629	SMARCA4	82	90.023	Sus_scrofa
ENSPLAG00000018616	-	52	85.242	ENSTGUG00000015488	-	98	85.018	Taeniopygia_guttata
ENSPLAG00000018616	-	89	81.481	ENSTRUG00000004885	smarca4a	100	81.737	Takifugu_rubripes
ENSPLAG00000018616	-	96	89.118	ENSTRUG00000001378	SMARCA4	99	88.618	Takifugu_rubripes
ENSPLAG00000018616	-	98	90.100	ENSTNIG00000004536	SMARCA4	82	93.679	Tetraodon_nigroviridis
ENSPLAG00000018616	-	73	84.340	ENSTNIG00000004859	-	88	90.120	Tetraodon_nigroviridis
ENSPLAG00000018616	-	81	86.885	ENSTTRG00000009519	SMARCA4	83	85.767	Tursiops_truncatus
ENSPLAG00000018616	-	81	90.604	ENSUAMG00000014661	SMARCA4	82	90.150	Ursus_americanus
ENSPLAG00000018616	-	97	83.863	ENSUMAG00000022005	SMARCA4	98	90.563	Ursus_maritimus
ENSPLAG00000018616	-	81	90.527	ENSVVUG00000017820	SMARCA4	80	90.150	Vulpes_vulpes
ENSPLAG00000018616	-	98	82.193	ENSXETG00000009355	smarca4	99	82.527	Xenopus_tropicalis
ENSPLAG00000018616	-	99	93.898	ENSXCOG00000013494	-	99	94.521	Xiphophorus_couchianus
ENSPLAG00000018616	-	99	95.523	ENSXMAG00000007030	-	99	95.455	Xiphophorus_maculatus
ENSPLAG00000018616	-	98	85.059	ENSXMAG00000006321	smarca4a	100	84.471	Xiphophorus_maculatus