EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000018788 (Gene tree)
Gene ID: 106946816
Gene Symbol: trmt1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 11000 bases
Position: chrKQ545523.1:220944-231943
Accession: 106946816
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000028950	TRM	PF02005.16	4.1e-140	1	1
ENSPLAP00000014935	TRM	PF02005.16	5.2e-140	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000023425	-	2696	XM_015031452	ENSPLAP00000028950	584 (aa)	XP_014886938	-
ENSPLAT00000023419	-	1899	-	ENSPLAP00000014935	632 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000018788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000018788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000018788	trmt1	87	72.201	ENSG00000104907	TRMT1	100	77.604	Homo_sapiens
ENSPLAG00000018788	trmt1	98	65.404	ENSAMEG00000012598	TRMT1	94	63.323	Ailuropoda_melanoleuca
ENSPLAG00000018788	trmt1	95	77.265	ENSACIG00000018680	trmt1	95	77.265	Amphilophus_citrinellus
ENSPLAG00000018788	trmt1	100	80.725	ENSAOCG00000006781	trmt1	100	79.305	Amphiprion_ocellaris
ENSPLAG00000018788	trmt1	100	80.890	ENSAPEG00000007712	trmt1	100	79.456	Amphiprion_percula
ENSPLAG00000018788	trmt1	100	80.163	ENSATEG00000001872	trmt1	100	78.806	Anabas_testudineus
ENSPLAG00000018788	trmt1	89	69.790	ENSACAG00000003825	TRMT1	93	67.888	Anolis_carolinensis
ENSPLAG00000018788	trmt1	87	70.349	ENSANAG00000023016	TRMT1	92	67.426	Aotus_nancymaae
ENSPLAG00000018788	trmt1	93	83.516	ENSACLG00000010073	trmt1	96	83.531	Astatotilapia_calliptera
ENSPLAG00000018788	trmt1	93	78.689	ENSAMXG00000012026	trmt1	91	77.152	Astyanax_mexicanus
ENSPLAG00000018788	trmt1	91	69.358	ENSBTAG00000019325	TRMT1	85	66.833	Bos_taurus
ENSPLAG00000018788	trmt1	87	41.199	WBGene00006613	trm-1	94	40.918	Caenorhabditis_elegans
ENSPLAG00000018788	trmt1	87	70.213	ENSCJAG00000004566	TRMT1	88	66.261	Callithrix_jacchus
ENSPLAG00000018788	trmt1	97	66.783	ENSCAFG00000017070	TRMT1	90	69.512	Canis_familiaris
ENSPLAG00000018788	trmt1	97	66.551	ENSCAFG00020005397	TRMT1	88	69.489	Canis_lupus_dingo
ENSPLAG00000018788	trmt1	89	70.245	ENSCHIG00000013569	TRMT1	88	67.747	Capra_hircus
ENSPLAG00000018788	trmt1	95	63.740	ENSTSYG00000003207	TRMT1	93	63.740	Carlito_syrichta
ENSPLAG00000018788	trmt1	81	68.737	ENSCAPG00000003355	TRMT1	94	65.267	Cavia_aperea
ENSPLAG00000018788	trmt1	89	69.376	ENSCPOG00000011754	TRMT1	88	66.952	Cavia_porcellus
ENSPLAG00000018788	trmt1	87	69.574	ENSCCAG00000022263	TRMT1	92	66.375	Cebus_capucinus
ENSPLAG00000018788	trmt1	88	70.881	ENSCATG00000039850	TRMT1	86	69.056	Cercocebus_atys
ENSPLAG00000018788	trmt1	78	59.091	ENSCATG00000038220	-	90	59.091	Cercocebus_atys
ENSPLAG00000018788	trmt1	92	69.373	ENSCLAG00000015295	TRMT1	92	65.195	Chinchilla_lanigera
ENSPLAG00000018788	trmt1	80	72.000	ENSCSAG00000006500	TRMT1	89	72.000	Chlorocebus_sabaeus
ENSPLAG00000018788	trmt1	97	68.254	ENSCPBG00000023866	TRMT1	91	66.069	Chrysemys_picta_bellii
ENSPLAG00000018788	trmt1	89	49.254	ENSCING00000002884	-	97	48.029	Ciona_intestinalis
ENSPLAG00000018788	trmt1	88	51.544	ENSCSAVG00000010927	-	100	49.444	Ciona_savignyi
ENSPLAG00000018788	trmt1	88	54.450	ENSCANG00000040631	TRMT1	86	54.450	Colobus_angolensis_palliatus
ENSPLAG00000018788	trmt1	84	56.137	ENSCANG00000031650	-	86	55.072	Colobus_angolensis_palliatus
ENSPLAG00000018788	trmt1	92	67.276	ENSCGRG00001022594	Trmt1	91	65.882	Cricetulus_griseus_chok1gshd
ENSPLAG00000018788	trmt1	92	67.276	ENSCGRG00000017732	Trmt1	89	65.882	Cricetulus_griseus_crigri
ENSPLAG00000018788	trmt1	93	84.037	ENSCSEG00000001643	trmt1	90	82.333	Cynoglossus_semilaevis
ENSPLAG00000018788	trmt1	100	85.075	ENSCVAG00000011886	trmt1	100	84.043	Cyprinodon_variegatus
ENSPLAG00000018788	trmt1	93	79.422	ENSDARG00000010978	trmt1	91	76.847	Danio_rerio
ENSPLAG00000018788	trmt1	80	47.148	ENSDNOG00000048240	-	89	47.148	Dasypus_novemcinctus
ENSPLAG00000018788	trmt1	90	66.917	ENSDORG00000014298	Trmt1	87	65.636	Dipodomys_ordii
ENSPLAG00000018788	trmt1	89	48.393	FBgn0032430	CG6388	93	47.387	Drosophila_melanogaster
ENSPLAG00000018788	trmt1	87	51.969	ENSEBUG00000003449	trmt1	75	52.250	Eptatretus_burgeri
ENSPLAG00000018788	trmt1	89	69.811	ENSEASG00005004050	TRMT1	95	65.738	Equus_asinus_asinus
ENSPLAG00000018788	trmt1	89	69.811	ENSECAG00000016149	TRMT1	91	67.632	Equus_caballus
ENSPLAG00000018788	trmt1	60	61.190	ENSEEUG00000014102	-	100	58.481	Erinaceus_europaeus
ENSPLAG00000018788	trmt1	94	75.714	ENSELUG00000021659	trmt1	91	74.384	Esox_lucius
ENSPLAG00000018788	trmt1	87	70.986	ENSFCAG00000000483	TRMT1	87	68.182	Felis_catus
ENSPLAG00000018788	trmt1	89	70.778	ENSFDAG00000007386	TRMT1	88	67.698	Fukomys_damarensis
ENSPLAG00000018788	trmt1	99	85.452	ENSFHEG00000012865	trmt1	100	85.452	Fundulus_heteroclitus
ENSPLAG00000018788	trmt1	89	74.713	ENSGMOG00000006564	trmt1	99	73.145	Gadus_morhua
ENSPLAG00000018788	trmt1	100	94.692	ENSGAFG00000011862	trmt1	100	93.427	Gambusia_affinis
ENSPLAG00000018788	trmt1	91	81.146	ENSGACG00000000227	trmt1	92	81.947	Gasterosteus_aculeatus
ENSPLAG00000018788	trmt1	90	71.218	ENSGAGG00000016432	TRMT1	88	68.547	Gopherus_agassizii
ENSPLAG00000018788	trmt1	87	72.201	ENSGGOG00000014007	TRMT1	87	69.634	Gorilla_gorilla
ENSPLAG00000018788	trmt1	88	76.641	ENSHBUG00000008821	trmt1	92	76.503	Haplochromis_burtoni
ENSPLAG00000018788	trmt1	92	68.566	ENSHGLG00000015972	TRMT1	90	66.555	Heterocephalus_glaber_female
ENSPLAG00000018788	trmt1	94	61.614	ENSHGLG00100018112	TRMT1	93	61.614	Heterocephalus_glaber_male
ENSPLAG00000018788	trmt1	94	79.818	ENSHCOG00000009447	trmt1	94	77.686	Hippocampus_comes
ENSPLAG00000018788	trmt1	89	77.491	ENSIPUG00000002899	trmt1	86	77.226	Ictalurus_punctatus
ENSPLAG00000018788	trmt1	90	69.533	ENSSTOG00000012531	TRMT1	88	68.096	Ictidomys_tridecemlineatus
ENSPLAG00000018788	trmt1	89	69.187	ENSJJAG00000017154	Trmt1	90	66.102	Jaculus_jaculus
ENSPLAG00000018788	trmt1	99	83.860	ENSKMAG00000011809	trmt1	98	85.420	Kryptolebias_marmoratus
ENSPLAG00000018788	trmt1	100	78.409	ENSLBEG00000012703	trmt1	100	77.347	Labrus_bergylta
ENSPLAG00000018788	trmt1	89	62.949	ENSLACG00000014585	TRMT1	95	61.979	Latimeria_chalumnae
ENSPLAG00000018788	trmt1	82	78.914	ENSLOCG00000006479	trmt1	99	71.150	Lepisosteus_oculatus
ENSPLAG00000018788	trmt1	95	68.327	ENSLAFG00000014072	TRMT1	94	66.613	Loxodonta_africana
ENSPLAG00000018788	trmt1	87	71.567	ENSMFAG00000033143	TRMT1	86	69.056	Macaca_fascicularis
ENSPLAG00000018788	trmt1	87	68.654	ENSMMUG00000001167	TRMT1	87	65.542	Macaca_mulatta
ENSPLAG00000018788	trmt1	87	71.567	ENSMNEG00000037867	TRMT1	86	69.056	Macaca_nemestrina
ENSPLAG00000018788	trmt1	87	71.373	ENSMLEG00000016142	TRMT1	87	68.881	Mandrillus_leucophaeus
ENSPLAG00000018788	trmt1	95	86.225	ENSMAMG00000004357	trmt1	92	84.528	Mastacembelus_armatus
ENSPLAG00000018788	trmt1	100	79.470	ENSMZEG00005014510	trmt1	100	78.756	Maylandia_zebra
ENSPLAG00000018788	trmt1	93	66.969	ENSMAUG00000011134	Trmt1	91	65.239	Mesocricetus_auratus
ENSPLAG00000018788	trmt1	90	70.356	ENSMICG00000000793	TRMT1	88	68.611	Microcebus_murinus
ENSPLAG00000018788	trmt1	92	67.587	ENSMOCG00000015895	Trmt1	87	67.642	Microtus_ochrogaster
ENSPLAG00000018788	trmt1	95	82.883	ENSMMOG00000011097	trmt1	99	80.820	Mola_mola
ENSPLAG00000018788	trmt1	92	69.982	ENSMODG00000011619	TRMT1	96	68.297	Monodelphis_domestica
ENSPLAG00000018788	trmt1	99	65.404	MGP_CAROLIEiJ_G0031304	Trmt1	97	63.137	Mus_caroli
ENSPLAG00000018788	trmt1	99	65.345	ENSMUSG00000001909	Trmt1	97	62.992	Mus_musculus
ENSPLAG00000018788	trmt1	99	65.690	MGP_SPRETEiJ_G0032422	Trmt1	97	62.992	Mus_spretus
ENSPLAG00000018788	trmt1	87	72.147	ENSMPUG00000004210	TRMT1	83	69.125	Mustela_putorius_furo
ENSPLAG00000018788	trmt1	99	66.895	ENSMLUG00000012809	TRMT1	93	65.312	Myotis_lucifugus
ENSPLAG00000018788	trmt1	95	66.312	ENSNGAG00000022486	Trmt1	92	64.355	Nannospalax_galili
ENSPLAG00000018788	trmt1	76	91.228	ENSNBRG00000024376	trmt1	87	88.496	Neolamprologus_brichardi
ENSPLAG00000018788	trmt1	67	72.115	ENSNLEG00000013019	-	83	68.367	Nomascus_leucogenys
ENSPLAG00000018788	trmt1	90	70.152	ENSMEUG00000013756	TRMT1	98	68.348	Notamacropus_eugenii
ENSPLAG00000018788	trmt1	77	76.056	ENSOPRG00000009471	-	76	71.951	Ochotona_princeps
ENSPLAG00000018788	trmt1	87	70.986	ENSODEG00000010323	TRMT1	87	68.651	Octodon_degus
ENSPLAG00000018788	trmt1	100	82.947	ENSONIG00000000400	trmt1	96	85.953	Oreochromis_niloticus
ENSPLAG00000018788	trmt1	88	68.522	ENSOCUG00000021934	TRMT1	97	68.846	Oryctolagus_cuniculus
ENSPLAG00000018788	trmt1	94	78.237	ENSORLG00000020074	trmt1	97	76.923	Oryzias_latipes
ENSPLAG00000018788	trmt1	99	78.894	ENSORLG00020007561	trmt1	96	80.992	Oryzias_latipes_hni
ENSPLAG00000018788	trmt1	95	81.560	ENSORLG00015006547	trmt1	99	77.147	Oryzias_latipes_hsok
ENSPLAG00000018788	trmt1	96	81.152	ENSOMEG00000019343	trmt1	96	79.618	Oryzias_melastigma
ENSPLAG00000018788	trmt1	88	70.690	ENSOGAG00000025576	TRMT1	90	68.935	Otolemur_garnettii
ENSPLAG00000018788	trmt1	89	56.473	ENSOARG00000009397	TRMT1	83	54.077	Ovis_aries
ENSPLAG00000018788	trmt1	87	63.514	ENSPPRG00000012117	TRMT1	87	61.780	Panthera_pardus
ENSPLAG00000018788	trmt1	65	70.588	ENSPTIG00000008833	TRMT1	82	70.588	Panthera_tigris_altaica
ENSPLAG00000018788	trmt1	85	53.696	ENSPTRG00000050421	-	89	52.105	Pan_troglodytes
ENSPLAG00000018788	trmt1	87	72.201	ENSPTRG00000010557	TRMT1	87	69.634	Pan_troglodytes
ENSPLAG00000018788	trmt1	84	53.073	ENSPANG00000034058	-	85	53.073	Papio_anubis
ENSPLAG00000018788	trmt1	87	71.567	ENSPANG00000009247	TRMT1	87	69.056	Papio_anubis
ENSPLAG00000018788	trmt1	91	80.755	ENSPKIG00000005309	trmt1	87	78.276	Paramormyrops_kingsleyae
ENSPLAG00000018788	trmt1	98	56.971	ENSPSIG00000008762	TRMT1	86	55.719	Pelodiscus_sinensis
ENSPLAG00000018788	trmt1	89	85.385	ENSPMGG00000019764	trmt1	98	79.572	Periophthalmus_magnuspinnatus
ENSPLAG00000018788	trmt1	93	67.928	ENSPEMG00000016247	Trmt1	91	66.232	Peromyscus_maniculatus_bairdii
ENSPLAG00000018788	trmt1	88	66.408	ENSPMAG00000004329	trmt1	90	64.311	Petromyzon_marinus
ENSPLAG00000018788	trmt1	92	69.557	ENSPCIG00000019273	TRMT1	92	67.905	Phascolarctos_cinereus
ENSPLAG00000018788	trmt1	100	99.315	ENSPFOG00000008527	trmt1	100	98.122	Poecilia_formosa
ENSPLAG00000018788	trmt1	100	98.630	ENSPMEG00000013120	trmt1	100	97.340	Poecilia_mexicana
ENSPLAG00000018788	trmt1	100	95.034	ENSPREG00000000211	trmt1	96	94.313	Poecilia_reticulata
ENSPLAG00000018788	trmt1	87	71.815	ENSPPYG00000009622	TRMT1	87	69.284	Pongo_abelii
ENSPLAG00000018788	trmt1	92	65.065	ENSPCAG00000003698	TRMT1	91	63.423	Procavia_capensis
ENSPLAG00000018788	trmt1	96	66.490	ENSPCOG00000008653	TRMT1	93	64.992	Propithecus_coquereli
ENSPLAG00000018788	trmt1	87	72.340	ENSPVAG00000015076	TRMT1	87	69.459	Pteropus_vampyrus
ENSPLAG00000018788	trmt1	91	83.521	ENSPNYG00000013960	trmt1	96	82.173	Pundamilia_nyererei
ENSPLAG00000018788	trmt1	95	68.174	ENSPNAG00000024859	trmt1	97	68.669	Pygocentrus_nattereri
ENSPLAG00000018788	trmt1	92	67.706	ENSRNOG00000002914	Trmt1	92	66.218	Rattus_norvegicus
ENSPLAG00000018788	trmt1	84	53.968	ENSRBIG00000037505	-	87	53.237	Rhinopithecus_bieti
ENSPLAG00000018788	trmt1	87	72.287	ENSRBIG00000038324	TRMT1	86	69.702	Rhinopithecus_bieti
ENSPLAG00000018788	trmt1	84	53.293	ENSRROG00000031847	-	86	52.698	Rhinopithecus_roxellana
ENSPLAG00000018788	trmt1	87	72.287	ENSRROG00000028599	TRMT1	86	69.702	Rhinopithecus_roxellana
ENSPLAG00000018788	trmt1	86	39.171	YDR120C	-	92	39.171	Saccharomyces_cerevisiae
ENSPLAG00000018788	trmt1	87	69.632	ENSSBOG00000028861	TRMT1	92	66.608	Saimiri_boliviensis_boliviensis
ENSPLAG00000018788	trmt1	89	72.115	ENSSHAG00000014381	TRMT1	93	70.351	Sarcophilus_harrisii
ENSPLAG00000018788	trmt1	89	81.958	ENSSFOG00015004139	trmt1	85	79.029	Scleropages_formosus
ENSPLAG00000018788	trmt1	95	83.598	ENSSMAG00000021136	trmt1	100	78.111	Scophthalmus_maximus
ENSPLAG00000018788	trmt1	100	81.951	ENSSDUG00000012740	trmt1	100	81.493	Seriola_dumerili
ENSPLAG00000018788	trmt1	100	81.301	ENSSLDG00000005971	trmt1	100	81.045	Seriola_lalandi_dorsalis
ENSPLAG00000018788	trmt1	92	64.835	ENSSARG00000005138	TRMT1	95	64.835	Sorex_araneus
ENSPLAG00000018788	trmt1	87	57.834	ENSSPUG00000001084	TRMT1	91	55.148	Sphenodon_punctatus
ENSPLAG00000018788	trmt1	100	79.736	ENSSPAG00000007153	trmt1	99	83.278	Stegastes_partitus
ENSPLAG00000018788	trmt1	92	70.185	ENSSSCG00000013744	TRMT1	93	67.446	Sus_scrofa
ENSPLAG00000018788	trmt1	100	74.545	ENSTRUG00000010700	trmt1	95	74.057	Takifugu_rubripes
ENSPLAG00000018788	trmt1	90	85.255	ENSTNIG00000018808	trmt1	99	83.770	Tetraodon_nigroviridis
ENSPLAG00000018788	trmt1	89	67.992	ENSTTRG00000006379	TRMT1	88	66.038	Tursiops_truncatus
ENSPLAG00000018788	trmt1	87	71.567	ENSUAMG00000022911	TRMT1	94	66.842	Ursus_americanus
ENSPLAG00000018788	trmt1	87	71.180	ENSUMAG00000006027	TRMT1	90	68.641	Ursus_maritimus
ENSPLAG00000018788	trmt1	95	68.861	ENSVVUG00000024177	TRMT1	92	66.775	Vulpes_vulpes
ENSPLAG00000018788	trmt1	78	70.435	ENSXETG00000033863	TRMT1	92	70.435	Xenopus_tropicalis
ENSPLAG00000018788	trmt1	100	95.719	ENSXCOG00000015733	trmt1	100	94.366	Xiphophorus_couchianus
ENSPLAG00000018788	trmt1	88	97.481	ENSXMAG00000013823	trmt1	99	95.972	Xiphophorus_maculatus