EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000018896 (Gene tree)
Gene ID: 106940725
Gene Symbol: -
Alias: -
Full Name: RNA polymerase III subunit G like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3303 bases
Position: chrKQ548601.1:55400-58702
Accession: 106940725
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000029008	RNA_pol_3_Rpc31	PF11705.8	3.7e-17	1	1
ENSPLAP00000015008	RNA_pol_3_Rpc31	PF11705.8	6.4e-17	1	1
ENSPLAP00000029024	RNA_pol_3_Rpc31	PF11705.8	9.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000023534	-	615	XM_015023532	ENSPLAP00000029008	204 (aa)	XP_014879018	-
ENSPLAT00000030539	-	971	-	ENSPLAP00000029024	171 (aa)	-	-
ENSPLAT00000023530	-	546	-	ENSPLAP00000015008	181 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000018896's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000018896's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000018896	-	100	40.724	ENSPLAG00000012172	-	89	39.487

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000018896	-	100	66.071	ENSAPOG00000021349	-	93	65.072	Acanthochromis_polyacanthus
ENSPLAG00000018896	-	100	59.296	ENSAOCG00000023705	-	54	76.415	Amphiprion_ocellaris
ENSPLAG00000018896	-	100	64.732	ENSAPEG00000012672	-	93	63.636	Amphiprion_percula
ENSPLAG00000018896	-	53	65.217	ENSATEG00000017648	-	77	66.234	Anabas_testudineus
ENSPLAG00000018896	-	100	66.486	ENSACLG00000016072	-	91	68.675	Astatotilapia_calliptera
ENSPLAG00000018896	-	100	66.355	ENSFHEG00000013634	-	94	68.159	Fundulus_heteroclitus
ENSPLAG00000018896	-	70	96.296	ENSHBUG00000009915	-	93	57.005	Haplochromis_burtoni
ENSPLAG00000018896	-	96	63.380	ENSLBEG00000020028	-	92	60.766	Labrus_bergylta
ENSPLAG00000018896	-	100	64.126	ENSMAMG00000017037	-	93	63.942	Mastacembelus_armatus
ENSPLAG00000018896	-	70	96.296	ENSMZEG00005010079	-	93	57.005	Maylandia_zebra
ENSPLAG00000018896	-	100	63.131	ENSNBRG00000008808	-	88	62.842	Neolamprologus_brichardi
ENSPLAG00000018896	-	100	62.100	ENSONIG00000001460	-	91	64.356	Oreochromis_niloticus
ENSPLAG00000018896	-	100	63.131	ENSORLG00000020581	-	91	60.000	Oryzias_latipes
ENSPLAG00000018896	-	100	66.489	ENSORLG00015013774	-	93	60.571	Oryzias_latipes_hsok
ENSPLAG00000018896	-	84	57.237	ENSPMGG00000004729	-	85	56.579	Periophthalmus_magnuspinnatus
ENSPLAG00000018896	-	92	94.304	ENSPFOG00000014955	-	94	89.109	Poecilia_formosa
ENSPLAG00000018896	-	92	94.304	ENSPMEG00000000239	-	94	89.109	Poecilia_mexicana
ENSPLAG00000018896	-	100	83.412	ENSPREG00000015562	-	100	83.412	Poecilia_reticulata
ENSPLAG00000018896	-	52	71.134	ENSPNYG00000014307	-	66	71.134	Pundamilia_nyererei
ENSPLAG00000018896	-	100	65.471	ENSSDUG00000014360	-	93	63.942	Seriola_dumerili
ENSPLAG00000018896	-	55	62.745	ENSSLDG00000022819	-	60	77.273	Seriola_lalandi_dorsalis
ENSPLAG00000018896	-	100	68.778	ENSSPAG00000010477	-	93	67.476	Stegastes_partitus
ENSPLAG00000018896	-	100	53.052	ENSTNIG00000002936	-	90	56.633	Tetraodon_nigroviridis
ENSPLAG00000018896	-	93	94.048	ENSXCOG00000020741	-	93	94.048	Xiphophorus_couchianus
ENSPLAG00000018896	-	93	94.643	ENSXMAG00000008638	-	93	94.643	Xiphophorus_maculatus