EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000019199 (Gene tree)
Gene ID: 106962967
Gene Symbol: cpsf2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 8196 bases
Position: chrKQ545376.1:904824-913019
Accession: 106962967
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000029184	Beta-Casp	PF10996.8	2.8e-21	1	1
ENSPLAP00000029184	Lactamase_B	PF00753.27	3.9e-05	1	1
ENSPLAP00000029184	RMMBL	PF07521.12	2.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000023902	-	2773	XM_015057651	ENSPLAP00000029184	792 (aa)	XP_014913137	-

Gene Model

Click here to download ENSPLAG00000019199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019199's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019199	cpsf2	99	85.298	ENSG00000165934	CPSF2	100	87.500	Homo_sapiens
ENSPLAG00000019199	cpsf2	99	95.426	ENSAPOG00000001242	cpsf2	100	95.426	Acanthochromis_polyacanthus
ENSPLAG00000019199	cpsf2	99	94.924	ENSACIG00000009331	cpsf2	100	94.924	Amphilophus_citrinellus
ENSPLAG00000019199	cpsf2	99	95.934	ENSAOCG00000014095	cpsf2	100	95.934	Amphiprion_ocellaris
ENSPLAG00000019199	cpsf2	99	95.934	ENSAPEG00000009158	cpsf2	100	95.934	Amphiprion_percula
ENSPLAG00000019199	cpsf2	97	94.010	ENSATEG00000017644	cpsf2	99	93.792	Anabas_testudineus
ENSPLAG00000019199	cpsf2	99	85.190	ENSAPLG00000006330	CPSF2	100	85.190	Anas_platyrhynchos
ENSPLAG00000019199	cpsf2	99	85.044	ENSACAG00000009245	CPSF2	100	85.044	Anolis_carolinensis
ENSPLAG00000019199	cpsf2	99	85.551	ENSANAG00000022915	CPSF2	100	85.551	Aotus_nancymaae
ENSPLAG00000019199	cpsf2	99	89.480	ENSAMXG00000018696	cpsf2	100	89.480	Astyanax_mexicanus
ENSPLAG00000019199	cpsf2	99	85.425	ENSBTAG00000010227	CPSF2	100	85.425	Bos_taurus
ENSPLAG00000019199	cpsf2	99	42.204	WBGene00017313	cpsf-2	100	42.689	Caenorhabditis_elegans
ENSPLAG00000019199	cpsf2	99	85.551	ENSCJAG00000018069	CPSF2	100	85.551	Callithrix_jacchus
ENSPLAG00000019199	cpsf2	99	85.298	ENSCAFG00000010909	CPSF2	100	85.298	Canis_familiaris
ENSPLAG00000019199	cpsf2	99	85.298	ENSCAFG00020020670	CPSF2	100	85.298	Canis_lupus_dingo
ENSPLAG00000019199	cpsf2	99	85.425	ENSCHIG00000023848	CPSF2	100	85.425	Capra_hircus
ENSPLAG00000019199	cpsf2	99	85.678	ENSTSYG00000009036	CPSF2	100	85.678	Carlito_syrichta
ENSPLAG00000019199	cpsf2	99	85.425	ENSCPOG00000010899	CPSF2	100	85.425	Cavia_porcellus
ENSPLAG00000019199	cpsf2	99	85.551	ENSCCAG00000028088	CPSF2	100	85.551	Cebus_capucinus
ENSPLAG00000019199	cpsf2	99	85.425	ENSCATG00000030132	CPSF2	100	85.425	Cercocebus_atys
ENSPLAG00000019199	cpsf2	99	85.551	ENSCLAG00000012404	CPSF2	100	85.551	Chinchilla_lanigera
ENSPLAG00000019199	cpsf2	99	85.425	ENSCSAG00000011300	CPSF2	100	85.425	Chlorocebus_sabaeus
ENSPLAG00000019199	cpsf2	99	79.975	ENSCHOG00000012904	CPSF2	100	79.975	Choloepus_hoffmanni
ENSPLAG00000019199	cpsf2	99	85.209	ENSCPBG00000008766	CPSF2	98	85.209	Chrysemys_picta_bellii
ENSPLAG00000019199	cpsf2	99	52.985	ENSCING00000007881	-	100	52.985	Ciona_intestinalis
ENSPLAG00000019199	cpsf2	93	85.405	ENSCANG00000041651	CPSF2	100	85.386	Colobus_angolensis_palliatus
ENSPLAG00000019199	cpsf2	99	85.171	ENSCGRG00001006901	Cpsf2	100	85.171	Cricetulus_griseus_chok1gshd
ENSPLAG00000019199	cpsf2	99	85.171	ENSCGRG00000012416	Cpsf2	100	85.171	Cricetulus_griseus_crigri
ENSPLAG00000019199	cpsf2	99	93.409	ENSCSEG00000004116	cpsf2	100	93.401	Cynoglossus_semilaevis
ENSPLAG00000019199	cpsf2	99	98.221	ENSCVAG00000000095	cpsf2	100	98.221	Cyprinodon_variegatus
ENSPLAG00000019199	cpsf2	99	87.975	ENSDARG00000028971	cpsf2	100	87.975	Danio_rerio
ENSPLAG00000019199	cpsf2	99	85.425	ENSDNOG00000042757	CPSF2	100	85.425	Dasypus_novemcinctus
ENSPLAG00000019199	cpsf2	99	85.425	ENSDORG00000013709	Cpsf2	100	85.425	Dipodomys_ordii
ENSPLAG00000019199	cpsf2	99	53.894	FBgn0027873	Cpsf100	100	53.894	Drosophila_melanogaster
ENSPLAG00000019199	cpsf2	99	77.722	ENSETEG00000012123	CPSF2	100	77.722	Echinops_telfairi
ENSPLAG00000019199	cpsf2	52	75.795	ENSEBUG00000012098	cpsf2	93	75.795	Eptatretus_burgeri
ENSPLAG00000019199	cpsf2	88	90.102	ENSEASG00005021193	CPSF2	100	90.102	Equus_asinus_asinus
ENSPLAG00000019199	cpsf2	99	85.298	ENSECAG00000023935	CPSF2	100	85.298	Equus_caballus
ENSPLAG00000019199	cpsf2	99	89.196	ENSELUG00000008442	cpsf2	100	89.196	Esox_lucius
ENSPLAG00000019199	cpsf2	99	85.298	ENSFCAG00000007886	CPSF2	100	85.298	Felis_catus
ENSPLAG00000019199	cpsf2	99	85.279	ENSFALG00000002412	CPSF2	100	85.279	Ficedula_albicollis
ENSPLAG00000019199	cpsf2	99	85.298	ENSFDAG00000006327	CPSF2	100	85.298	Fukomys_damarensis
ENSPLAG00000019199	cpsf2	96	96.859	ENSFHEG00000015465	cpsf2	98	96.859	Fundulus_heteroclitus
ENSPLAG00000019199	cpsf2	99	89.899	ENSGMOG00000008761	cpsf2	100	89.899	Gadus_morhua
ENSPLAG00000019199	cpsf2	99	85.533	ENSGALG00000010783	CPSF2	100	85.533	Gallus_gallus
ENSPLAG00000019199	cpsf2	99	99.238	ENSGAFG00000001407	cpsf2	100	99.238	Gambusia_affinis
ENSPLAG00000019199	cpsf2	99	94.663	ENSGACG00000008418	cpsf2	100	94.663	Gasterosteus_aculeatus
ENSPLAG00000019199	cpsf2	99	85.171	ENSGAGG00000008287	CPSF2	100	85.171	Gopherus_agassizii
ENSPLAG00000019199	cpsf2	99	85.298	ENSGGOG00000011799	CPSF2	100	85.298	Gorilla_gorilla
ENSPLAG00000019199	cpsf2	99	93.520	ENSHBUG00000023466	cpsf2	100	93.520	Haplochromis_burtoni
ENSPLAG00000019199	cpsf2	99	85.425	ENSHGLG00000018311	CPSF2	100	85.425	Heterocephalus_glaber_female
ENSPLAG00000019199	cpsf2	99	85.425	ENSHGLG00100016460	CPSF2	100	85.425	Heterocephalus_glaber_male
ENSPLAG00000019199	cpsf2	99	92.658	ENSHCOG00000019527	cpsf2	99	92.658	Hippocampus_comes
ENSPLAG00000019199	cpsf2	99	89.480	ENSIPUG00000020857	cpsf2	100	89.480	Ictalurus_punctatus
ENSPLAG00000019199	cpsf2	99	85.551	ENSSTOG00000009528	CPSF2	100	85.551	Ictidomys_tridecemlineatus
ENSPLAG00000019199	cpsf2	99	85.298	ENSJJAG00000017925	Cpsf2	100	85.298	Jaculus_jaculus
ENSPLAG00000019199	cpsf2	99	95.299	ENSKMAG00000019429	cpsf2	100	95.299	Kryptolebias_marmoratus
ENSPLAG00000019199	cpsf2	94	93.968	ENSLBEG00000011585	cpsf2	100	93.968	Labrus_bergylta
ENSPLAG00000019199	cpsf2	99	83.376	ENSLACG00000019024	CPSF2	100	83.777	Latimeria_chalumnae
ENSPLAG00000019199	cpsf2	99	88.734	ENSLOCG00000014102	cpsf2	100	88.734	Lepisosteus_oculatus
ENSPLAG00000019199	cpsf2	99	84.829	ENSLAFG00000004891	CPSF2	100	84.829	Loxodonta_africana
ENSPLAG00000019199	cpsf2	99	85.425	ENSMFAG00000041212	CPSF2	100	85.425	Macaca_fascicularis
ENSPLAG00000019199	cpsf2	99	85.425	ENSMMUG00000000699	CPSF2	100	85.425	Macaca_mulatta
ENSPLAG00000019199	cpsf2	99	85.425	ENSMNEG00000031584	CPSF2	100	85.425	Macaca_nemestrina
ENSPLAG00000019199	cpsf2	99	85.425	ENSMLEG00000029394	CPSF2	100	85.425	Mandrillus_leucophaeus
ENSPLAG00000019199	cpsf2	99	95.426	ENSMAMG00000004235	cpsf2	100	95.426	Mastacembelus_armatus
ENSPLAG00000019199	cpsf2	99	93.647	ENSMZEG00005001769	cpsf2	100	93.647	Maylandia_zebra
ENSPLAG00000019199	cpsf2	99	85.298	ENSMGAG00000013122	CPSF2	100	85.298	Meleagris_gallopavo
ENSPLAG00000019199	cpsf2	99	85.171	ENSMAUG00000015160	Cpsf2	100	85.171	Mesocricetus_auratus
ENSPLAG00000019199	cpsf2	99	85.425	ENSMICG00000016441	CPSF2	100	85.425	Microcebus_murinus
ENSPLAG00000019199	cpsf2	99	84.918	ENSMOCG00000015372	Cpsf2	100	84.918	Microtus_ochrogaster
ENSPLAG00000019199	cpsf2	99	88.691	ENSMMOG00000015590	cpsf2	100	88.691	Mola_mola
ENSPLAG00000019199	cpsf2	99	85.425	ENSMODG00000002042	CPSF2	100	85.425	Monodelphis_domestica
ENSPLAG00000019199	cpsf2	99	91.487	ENSMALG00000022275	cpsf2	100	91.487	Monopterus_albus
ENSPLAG00000019199	cpsf2	99	85.171	ENSMUSG00000041781	Cpsf2	100	85.171	Mus_musculus
ENSPLAG00000019199	cpsf2	99	85.044	MGP_PahariEiJ_G0029791	Cpsf2	100	85.044	Mus_pahari
ENSPLAG00000019199	cpsf2	99	85.171	MGP_SPRETEiJ_G0018877	Cpsf2	100	85.171	Mus_spretus
ENSPLAG00000019199	cpsf2	99	85.443	ENSMPUG00000007617	CPSF2	98	85.443	Mustela_putorius_furo
ENSPLAG00000019199	cpsf2	99	84.918	ENSMLUG00000005570	CPSF2	100	84.918	Myotis_lucifugus
ENSPLAG00000019199	cpsf2	99	85.171	ENSNGAG00000020312	Cpsf2	100	85.171	Nannospalax_galili
ENSPLAG00000019199	cpsf2	99	94.028	ENSNBRG00000022402	cpsf2	100	94.028	Neolamprologus_brichardi
ENSPLAG00000019199	cpsf2	99	84.791	ENSNLEG00000017132	CPSF2	100	84.791	Nomascus_leucogenys
ENSPLAG00000019199	cpsf2	90	92.880	ENSMEUG00000008138	CPSF2	91	92.880	Notamacropus_eugenii
ENSPLAG00000019199	cpsf2	93	81.030	ENSOPRG00000008484	-	100	81.030	Ochotona_princeps
ENSPLAG00000019199	cpsf2	99	85.171	ENSODEG00000008682	CPSF2	100	85.171	Octodon_degus
ENSPLAG00000019199	cpsf2	99	93.774	ENSONIG00000005901	cpsf2	100	93.774	Oreochromis_niloticus
ENSPLAG00000019199	cpsf2	99	85.044	ENSOANG00000003822	CPSF2	100	85.044	Ornithorhynchus_anatinus
ENSPLAG00000019199	cpsf2	99	85.298	ENSOCUG00000005713	CPSF2	100	85.298	Oryctolagus_cuniculus
ENSPLAG00000019199	cpsf2	99	88.818	ENSORLG00000011628	cpsf2	100	88.818	Oryzias_latipes
ENSPLAG00000019199	cpsf2	99	94.663	ENSORLG00020016980	cpsf2	100	94.663	Oryzias_latipes_hni
ENSPLAG00000019199	cpsf2	99	94.663	ENSORLG00015011910	cpsf2	100	94.663	Oryzias_latipes_hsok
ENSPLAG00000019199	cpsf2	99	94.797	ENSOMEG00000022876	cpsf2	100	94.797	Oryzias_melastigma
ENSPLAG00000019199	cpsf2	99	82.427	ENSOARG00000012889	CPSF2	100	82.427	Ovis_aries
ENSPLAG00000019199	cpsf2	99	85.298	ENSPPAG00000039666	CPSF2	100	85.298	Pan_paniscus
ENSPLAG00000019199	cpsf2	99	85.279	ENSPPRG00000010869	CPSF2	100	85.279	Panthera_pardus
ENSPLAG00000019199	cpsf2	99	85.298	ENSPTIG00000021202	CPSF2	100	85.298	Panthera_tigris_altaica
ENSPLAG00000019199	cpsf2	99	85.298	ENSPTRG00000006651	CPSF2	100	85.298	Pan_troglodytes
ENSPLAG00000019199	cpsf2	99	85.425	ENSPANG00000017417	CPSF2	100	85.425	Papio_anubis
ENSPLAG00000019199	cpsf2	99	85.298	ENSPKIG00000021453	cpsf2	100	85.298	Paramormyrops_kingsleyae
ENSPLAG00000019199	cpsf2	99	84.791	ENSPSIG00000006289	CPSF2	100	84.791	Pelodiscus_sinensis
ENSPLAG00000019199	cpsf2	75	87.022	ENSPMGG00000002511	cpsf2	99	88.167	Periophthalmus_magnuspinnatus
ENSPLAG00000019199	cpsf2	99	85.298	ENSPEMG00000007917	Cpsf2	100	85.298	Peromyscus_maniculatus_bairdii
ENSPLAG00000019199	cpsf2	99	72.647	ENSPMAG00000006205	cpsf2	100	72.909	Petromyzon_marinus
ENSPLAG00000019199	cpsf2	99	85.425	ENSPCIG00000011393	CPSF2	100	85.425	Phascolarctos_cinereus
ENSPLAG00000019199	cpsf2	99	100.000	ENSPFOG00000018648	cpsf2	100	100.000	Poecilia_formosa
ENSPLAG00000019199	cpsf2	96	99.868	ENSPMEG00000012100	cpsf2	100	99.732	Poecilia_mexicana
ENSPLAG00000019199	cpsf2	99	98.983	ENSPREG00000008960	cpsf2	100	98.983	Poecilia_reticulata
ENSPLAG00000019199	cpsf2	63	81.312	ENSPPYG00000029685	-	100	81.312	Pongo_abelii
ENSPLAG00000019199	cpsf2	99	85.044	ENSPCAG00000012477	CPSF2	100	85.044	Procavia_capensis
ENSPLAG00000019199	cpsf2	99	85.551	ENSPCOG00000026387	CPSF2	100	85.551	Propithecus_coquereli
ENSPLAG00000019199	cpsf2	64	90.816	ENSPVAG00000004223	CPSF2	65	90.816	Pteropus_vampyrus
ENSPLAG00000019199	cpsf2	99	93.274	ENSPNYG00000023356	cpsf2	100	93.274	Pundamilia_nyererei
ENSPLAG00000019199	cpsf2	99	90.368	ENSPNAG00000001849	cpsf2	100	90.368	Pygocentrus_nattereri
ENSPLAG00000019199	cpsf2	99	85.171	ENSRNOG00000005733	Cpsf2	100	85.171	Rattus_norvegicus
ENSPLAG00000019199	cpsf2	99	85.425	ENSRBIG00000044792	CPSF2	100	85.425	Rhinopithecus_bieti
ENSPLAG00000019199	cpsf2	99	85.425	ENSRROG00000034875	CPSF2	100	85.425	Rhinopithecus_roxellana
ENSPLAG00000019199	cpsf2	99	85.551	ENSSBOG00000024571	CPSF2	100	85.551	Saimiri_boliviensis_boliviensis
ENSPLAG00000019199	cpsf2	99	85.551	ENSSHAG00000010458	CPSF2	100	85.551	Sarcophilus_harrisii
ENSPLAG00000019199	cpsf2	99	90.494	ENSSFOG00015002117	cpsf2	100	90.621	Scleropages_formosus
ENSPLAG00000019199	cpsf2	99	93.528	ENSSMAG00000002001	cpsf2	100	94.416	Scophthalmus_maximus
ENSPLAG00000019199	cpsf2	99	95.553	ENSSDUG00000004084	cpsf2	100	95.553	Seriola_dumerili
ENSPLAG00000019199	cpsf2	99	95.172	ENSSLDG00000024330	cpsf2	100	95.172	Seriola_lalandi_dorsalis
ENSPLAG00000019199	cpsf2	57	93.069	ENSSARG00000009784	-	63	93.069	Sorex_araneus
ENSPLAG00000019199	cpsf2	99	85.171	ENSSPUG00000013485	CPSF2	100	85.171	Sphenodon_punctatus
ENSPLAG00000019199	cpsf2	99	95.426	ENSSPAG00000013284	cpsf2	100	95.426	Stegastes_partitus
ENSPLAG00000019199	cpsf2	99	85.298	ENSSSCG00000002447	CPSF2	100	85.298	Sus_scrofa
ENSPLAG00000019199	cpsf2	99	85.406	ENSTGUG00000012571	-	100	85.406	Taeniopygia_guttata
ENSPLAG00000019199	cpsf2	99	92.503	ENSTRUG00000003742	cpsf2	100	92.503	Takifugu_rubripes
ENSPLAG00000019199	cpsf2	99	91.255	ENSTNIG00000012228	cpsf2	100	92.269	Tetraodon_nigroviridis
ENSPLAG00000019199	cpsf2	91	83.188	ENSTBEG00000004530	CPSF2	94	83.188	Tupaia_belangeri
ENSPLAG00000019199	cpsf2	88	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSPLAG00000019199	cpsf2	99	85.425	ENSUAMG00000028071	CPSF2	100	85.425	Ursus_americanus
ENSPLAG00000019199	cpsf2	99	85.425	ENSUMAG00000005029	CPSF2	99	89.614	Ursus_maritimus
ENSPLAG00000019199	cpsf2	99	85.279	ENSVPAG00000003503	CPSF2	100	85.279	Vicugna_pacos
ENSPLAG00000019199	cpsf2	99	85.298	ENSVVUG00000024642	CPSF2	100	85.298	Vulpes_vulpes
ENSPLAG00000019199	cpsf2	99	83.904	ENSXETG00000010289	cpsf2	100	83.904	Xenopus_tropicalis
ENSPLAG00000019199	cpsf2	99	98.602	ENSXCOG00000001764	cpsf2	100	98.602	Xiphophorus_couchianus
ENSPLAG00000019199	cpsf2	99	99.238	ENSXMAG00000017048	cpsf2	100	99.238	Xiphophorus_maculatus