EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000019208 (Gene tree)
Gene ID: 106948120
Gene Symbol: ddx56
Alias: -
Full Name: DEAD-box helicase 56
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 12824 bases
Position: chrKQ545589.1:67824-80647
Accession: 106948120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000015304	ResIII	PF04851.15	7.8e-09	1	1
ENSPLAP00000029181	ResIII	PF04851.15	8.8e-09	1	1
ENSPLAP00000029181	DEAD	PF00270.29	7.7e-40	1	1
ENSPLAP00000015304	DEAD	PF00270.29	9e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000023893	-	1566	-	ENSPLAP00000029181	521 (aa)	-	-
ENSPLAT00000023913	-	5451	XM_015033605	ENSPLAP00000015304	558 (aa)	XP_014889091	UPI00072DD266

Gene Model

Click here to download ENSPLAG00000019208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019208's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000019208	ddx56	80	30.144	ENSPLAG00000014318	ddx47	81	30.144
ENSPLAG00000019208	ddx56	76	31.296	ENSPLAG00000008368	ddx52	57	31.540
ENSPLAG00000019208	ddx56	78	30.583	ENSPLAG00000016185	ddx49	79	30.583
ENSPLAG00000019208	ddx56	76	30.617	ENSPLAG00000005210	ddx18	70	30.467
ENSPLAG00000019208	ddx56	78	30.370	ENSPLAG00000019684	ddx6	77	30.370

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019208	ddx56	97	64.909	ENSG00000136271	DDX56	98	68.508	Homo_sapiens
ENSPLAG00000019208	ddx56	100	85.740	ENSAPOG00000017113	ddx56	100	85.027	Acanthochromis_polyacanthus
ENSPLAG00000019208	ddx56	97	63.653	ENSAMEG00000017711	DDX56	97	63.465	Ailuropoda_melanoleuca
ENSPLAG00000019208	ddx56	95	73.684	ENSACIG00000013747	ddx56	99	89.011	Amphilophus_citrinellus
ENSPLAG00000019208	ddx56	91	87.474	ENSAOCG00000015447	-	87	88.090	Amphiprion_ocellaris
ENSPLAG00000019208	ddx56	95	85.910	ENSAOCG00000018059	ddx56	94	87.800	Amphiprion_ocellaris
ENSPLAG00000019208	ddx56	100	84.946	ENSAPEG00000007267	ddx56	100	84.946	Amphiprion_percula
ENSPLAG00000019208	ddx56	99	82.975	ENSATEG00000005279	ddx56	99	82.975	Anabas_testudineus
ENSPLAG00000019208	ddx56	100	82.321	ENSACLG00000020113	ddx56	100	82.143	Astatotilapia_calliptera
ENSPLAG00000019208	ddx56	99	75.045	ENSAMXG00000019357	ddx56	99	74.865	Astyanax_mexicanus
ENSPLAG00000019208	ddx56	97	64.899	ENSBTAG00000010602	DDX56	97	65.018	Bos_taurus
ENSPLAG00000019208	ddx56	97	40.143	WBGene00016073	C24H12.4	86	40.143	Caenorhabditis_elegans
ENSPLAG00000019208	ddx56	97	64.909	ENSCJAG00000012233	DDX56	99	63.486	Callithrix_jacchus
ENSPLAG00000019208	ddx56	79	61.839	ENSCAFG00000029295	DDX56	98	61.419	Canis_familiaris
ENSPLAG00000019208	ddx56	97	64.875	ENSCAFG00020019695	DDX56	97	64.299	Canis_lupus_dingo
ENSPLAG00000019208	ddx56	97	65.082	ENSCHIG00000014261	DDX56	98	63.873	Capra_hircus
ENSPLAG00000019208	ddx56	93	67.886	ENSTSYG00000008048	DDX56	97	64.835	Carlito_syrichta
ENSPLAG00000019208	ddx56	85	64.059	ENSCAPG00000006286	DDX56	99	62.446	Cavia_aperea
ENSPLAG00000019208	ddx56	97	65.751	ENSCPOG00000003359	DDX56	99	64.378	Cavia_porcellus
ENSPLAG00000019208	ddx56	99	63.670	ENSCCAG00000025303	DDX56	99	62.936	Cebus_capucinus
ENSPLAG00000019208	ddx56	97	64.416	ENSCATG00000039389	DDX56	97	63.985	Cercocebus_atys
ENSPLAG00000019208	ddx56	99	64.457	ENSCLAG00000007666	DDX56	99	64.273	Chinchilla_lanigera
ENSPLAG00000019208	ddx56	97	64.727	ENSCSAG00000015636	DDX56	97	64.299	Chlorocebus_sabaeus
ENSPLAG00000019208	ddx56	99	69.410	ENSCPBG00000024556	DDX56	99	69.410	Chrysemys_picta_bellii
ENSPLAG00000019208	ddx56	93	59.800	ENSCING00000005185	-	98	60.827	Ciona_intestinalis
ENSPLAG00000019208	ddx56	93	60.321	ENSCSAVG00000011266	-	99	60.878	Ciona_savignyi
ENSPLAG00000019208	ddx56	97	64.299	ENSCANG00000028187	DDX56	97	64.299	Colobus_angolensis_palliatus
ENSPLAG00000019208	ddx56	99	65.291	ENSCGRG00001019019	Ddx56	98	65.291	Cricetulus_griseus_chok1gshd
ENSPLAG00000019208	ddx56	99	65.291	ENSCGRG00000011870	Ddx56	98	65.291	Cricetulus_griseus_crigri
ENSPLAG00000019208	ddx56	100	80.927	ENSCSEG00000008368	ddx56	100	81.283	Cynoglossus_semilaevis
ENSPLAG00000019208	ddx56	100	92.294	ENSCVAG00000006499	ddx56	100	92.294	Cyprinodon_variegatus
ENSPLAG00000019208	ddx56	99	80.036	ENSDARG00000020913	ddx56	99	80.216	Danio_rerio
ENSPLAG00000019208	ddx56	85	63.425	ENSDNOG00000036526	DDX56	96	63.537	Dasypus_novemcinctus
ENSPLAG00000019208	ddx56	97	49.909	FBgn0001565	Hlc	96	49.909	Drosophila_melanogaster
ENSPLAG00000019208	ddx56	66	76.389	ENSETEG00000002969	-	64	76.389	Echinops_telfairi
ENSPLAG00000019208	ddx56	89	44.043	ENSETEG00000019559	-	100	44.161	Echinops_telfairi
ENSPLAG00000019208	ddx56	97	66.727	ENSEBUG00000009986	ddx56	98	66.182	Eptatretus_burgeri
ENSPLAG00000019208	ddx56	97	63.985	ENSEASG00005017795	DDX56	97	64.168	Equus_asinus_asinus
ENSPLAG00000019208	ddx56	97	63.803	ENSECAG00000019897	DDX56	97	63.985	Equus_caballus
ENSPLAG00000019208	ddx56	84	63.559	ENSEEUG00000004849	DDX56	97	62.712	Erinaceus_europaeus
ENSPLAG00000019208	ddx56	100	81.541	ENSELUG00000004150	ddx56	100	81.541	Esox_lucius
ENSPLAG00000019208	ddx56	97	63.774	ENSFCAG00000010261	DDX56	97	63.774	Felis_catus
ENSPLAG00000019208	ddx56	98	64.193	ENSFDAG00000007128	DDX56	98	63.636	Fukomys_damarensis
ENSPLAG00000019208	ddx56	100	88.333	ENSFHEG00000018008	ddx56	96	93.360	Fundulus_heteroclitus
ENSPLAG00000019208	ddx56	100	89.434	ENSGAFG00000006906	ddx56	100	90.000	Gambusia_affinis
ENSPLAG00000019208	ddx56	92	73.770	ENSGAGG00000006789	DDX56	91	72.461	Gopherus_agassizii
ENSPLAG00000019208	ddx56	97	64.909	ENSGGOG00000012031	DDX56	97	64.481	Gorilla_gorilla
ENSPLAG00000019208	ddx56	95	78.424	ENSHBUG00000015246	ddx56	96	78.236	Haplochromis_burtoni
ENSPLAG00000019208	ddx56	99	63.262	ENSHGLG00000017271	DDX56	99	62.903	Heterocephalus_glaber_female
ENSPLAG00000019208	ddx56	99	63.262	ENSHGLG00100015731	DDX56	99	62.903	Heterocephalus_glaber_male
ENSPLAG00000019208	ddx56	99	81.802	ENSHCOG00000001685	ddx56	99	81.441	Hippocampus_comes
ENSPLAG00000019208	ddx56	99	75.224	ENSIPUG00000006602	ddx56	98	75.404	Ictalurus_punctatus
ENSPLAG00000019208	ddx56	97	64.652	ENSSTOG00000000464	DDX56	97	64.407	Ictidomys_tridecemlineatus
ENSPLAG00000019208	ddx56	97	64.286	ENSJJAG00000014269	Ddx56	98	63.919	Jaculus_jaculus
ENSPLAG00000019208	ddx56	100	87.567	ENSKMAG00000016611	ddx56	99	87.034	Kryptolebias_marmoratus
ENSPLAG00000019208	ddx56	99	83.900	ENSLBEG00000026281	ddx56	100	83.005	Labrus_bergylta
ENSPLAG00000019208	ddx56	98	72.051	ENSLACG00000015551	DDX56	97	72.645	Latimeria_chalumnae
ENSPLAG00000019208	ddx56	99	78.777	ENSLOCG00000015185	ddx56	98	78.777	Lepisosteus_oculatus
ENSPLAG00000019208	ddx56	98	64.973	ENSLAFG00000018206	DDX56	98	64.791	Loxodonta_africana
ENSPLAG00000019208	ddx56	97	64.599	ENSMFAG00000041001	DDX56	97	64.168	Macaca_fascicularis
ENSPLAG00000019208	ddx56	97	64.599	ENSMMUG00000002645	DDX56	97	64.168	Macaca_mulatta
ENSPLAG00000019208	ddx56	97	64.599	ENSMNEG00000028492	DDX56	97	64.168	Macaca_nemestrina
ENSPLAG00000019208	ddx56	97	64.599	ENSMLEG00000043591	DDX56	97	64.168	Mandrillus_leucophaeus
ENSPLAG00000019208	ddx56	100	82.500	ENSMAMG00000007776	ddx56	99	82.616	Mastacembelus_armatus
ENSPLAG00000019208	ddx56	100	82.321	ENSMZEG00005009813	ddx56	100	82.143	Maylandia_zebra
ENSPLAG00000019208	ddx56	97	65.082	ENSMICG00000005550	DDX56	99	64.195	Microcebus_murinus
ENSPLAG00000019208	ddx56	97	63.736	ENSMOCG00000016782	Ddx56	97	63.553	Microtus_ochrogaster
ENSPLAG00000019208	ddx56	99	82.123	ENSMMOG00000009654	ddx56	100	82.123	Mola_mola
ENSPLAG00000019208	ddx56	98	60.799	ENSMODG00000016137	DDX56	97	60.436	Monodelphis_domestica
ENSPLAG00000019208	ddx56	71	80.481	ENSMALG00000016910	ddx56	100	80.481	Monopterus_albus
ENSPLAG00000019208	ddx56	99	63.110	MGP_CAROLIEiJ_G0016069	Ddx56	98	67.742	Mus_caroli
ENSPLAG00000019208	ddx56	99	63.291	ENSMUSG00000004393	Ddx56	98	68.145	Mus_musculus
ENSPLAG00000019208	ddx56	97	63.842	MGP_PahariEiJ_G0016822	Ddx56	98	67.742	Mus_pahari
ENSPLAG00000019208	ddx56	99	63.291	MGP_SPRETEiJ_G0016911	Ddx56	98	68.145	Mus_spretus
ENSPLAG00000019208	ddx56	97	63.437	ENSMPUG00000018196	DDX56	86	63.019	Mustela_putorius_furo
ENSPLAG00000019208	ddx56	97	63.962	ENSMLUG00000003509	DDX56	97	63.919	Myotis_lucifugus
ENSPLAG00000019208	ddx56	99	65.280	ENSNGAG00000018785	Ddx56	99	65.099	Nannospalax_galili
ENSPLAG00000019208	ddx56	93	81.762	ENSNBRG00000002656	ddx56	96	79.473	Neolamprologus_brichardi
ENSPLAG00000019208	ddx56	98	65.045	ENSNLEG00000003816	DDX56	98	64.621	Nomascus_leucogenys
ENSPLAG00000019208	ddx56	93	62.069	ENSMEUG00000006788	DDX56	99	62.069	Notamacropus_eugenii
ENSPLAG00000019208	ddx56	98	62.921	ENSOPRG00000000292	-	98	62.921	Ochotona_princeps
ENSPLAG00000019208	ddx56	70	68.194	ENSODEG00000014807	DDX56	99	68.085	Octodon_degus
ENSPLAG00000019208	ddx56	100	80.108	ENSONIG00000011509	ddx56	99	80.108	Oreochromis_niloticus
ENSPLAG00000019208	ddx56	96	57.699	ENSOANG00000006320	-	99	57.885	Ornithorhynchus_anatinus
ENSPLAG00000019208	ddx56	76	59.045	ENSOANG00000015987	-	94	59.045	Ornithorhynchus_anatinus
ENSPLAG00000019208	ddx56	51	67.547	ENSOANG00000010592	-	99	66.792	Ornithorhynchus_anatinus
ENSPLAG00000019208	ddx56	98	64.195	ENSOCUG00000022918	DDX56	98	64.079	Oryctolagus_cuniculus
ENSPLAG00000019208	ddx56	100	86.225	ENSORLG00000001434	ddx56	100	86.225	Oryzias_latipes
ENSPLAG00000019208	ddx56	100	86.047	ENSORLG00020015718	ddx56	97	86.047	Oryzias_latipes_hni
ENSPLAG00000019208	ddx56	99	86.201	ENSORLG00015003004	ddx56	96	86.201	Oryzias_latipes_hsok
ENSPLAG00000019208	ddx56	100	85.842	ENSOMEG00000022072	ddx56	99	85.842	Oryzias_melastigma
ENSPLAG00000019208	ddx56	97	64.474	ENSOGAG00000009981	DDX56	97	64.286	Otolemur_garnettii
ENSPLAG00000019208	ddx56	97	65.265	ENSOARG00000015240	DDX56	97	65.018	Ovis_aries
ENSPLAG00000019208	ddx56	97	62.254	ENSPPAG00000029147	DDX56	97	61.828	Pan_paniscus
ENSPLAG00000019208	ddx56	99	52.855	ENSPPAG00000031263	-	99	52.855	Pan_paniscus
ENSPLAG00000019208	ddx56	97	63.736	ENSPPRG00000014594	DDX56	97	63.553	Panthera_pardus
ENSPLAG00000019208	ddx56	94	56.144	ENSPTIG00000019500	DDX56	97	55.955	Panthera_tigris_altaica
ENSPLAG00000019208	ddx56	94	52.523	ENSPTRG00000052765	-	99	53.786	Pan_troglodytes
ENSPLAG00000019208	ddx56	97	64.909	ENSPTRG00000019147	DDX56	97	64.481	Pan_troglodytes
ENSPLAG00000019208	ddx56	97	64.234	ENSPANG00000002446	DDX56	97	63.803	Papio_anubis
ENSPLAG00000019208	ddx56	100	77.061	ENSPKIG00000018998	ddx56	99	77.061	Paramormyrops_kingsleyae
ENSPLAG00000019208	ddx56	98	81.679	ENSPMGG00000017421	ddx56	99	84.369	Periophthalmus_magnuspinnatus
ENSPLAG00000019208	ddx56	98	66.667	ENSPCIG00000009336	DDX56	98	65.677	Phascolarctos_cinereus
ENSPLAG00000019208	ddx56	100	99.821	ENSPFOG00000018658	ddx56	100	99.821	Poecilia_formosa
ENSPLAG00000019208	ddx56	100	99.642	ENSPMEG00000001775	ddx56	100	99.642	Poecilia_mexicana
ENSPLAG00000019208	ddx56	100	97.849	ENSPREG00000015142	ddx56	100	97.849	Poecilia_reticulata
ENSPLAG00000019208	ddx56	97	64.909	ENSPPYG00000017591	DDX56	97	64.481	Pongo_abelii
ENSPLAG00000019208	ddx56	97	64.404	ENSPCAG00000011499	DDX56	99	63.971	Procavia_capensis
ENSPLAG00000019208	ddx56	97	64.835	ENSPCOG00000024864	DDX56	97	64.469	Propithecus_coquereli
ENSPLAG00000019208	ddx56	86	69.668	ENSPVAG00000000791	DDX56	85	69.668	Pteropus_vampyrus
ENSPLAG00000019208	ddx56	100	82.143	ENSPNYG00000019212	ddx56	100	81.964	Pundamilia_nyererei
ENSPLAG00000019208	ddx56	99	78.777	ENSPNAG00000025446	ddx56	99	79.206	Pygocentrus_nattereri
ENSPLAG00000019208	ddx56	97	64.218	ENSRNOG00000004670	Ddx56	97	63.736	Rattus_norvegicus
ENSPLAG00000019208	ddx56	97	64.727	ENSRBIG00000030140	DDX56	97	64.299	Rhinopithecus_bieti
ENSPLAG00000019208	ddx56	97	64.545	ENSRROG00000044428	DDX56	97	64.117	Rhinopithecus_roxellana
ENSPLAG00000019208	ddx56	98	43.684	YLR276C	-	96	43.860	Saccharomyces_cerevisiae
ENSPLAG00000019208	ddx56	97	64.545	ENSSBOG00000034339	DDX56	99	63.119	Saimiri_boliviensis_boliviensis
ENSPLAG00000019208	ddx56	85	65.833	ENSSHAG00000016615	DDX56	98	65.481	Sarcophilus_harrisii
ENSPLAG00000019208	ddx56	100	77.005	ENSSFOG00015012795	ddx56	100	76.607	Scleropages_formosus
ENSPLAG00000019208	ddx56	100	83.126	ENSSMAG00000011280	ddx56	99	85.075	Scophthalmus_maximus
ENSPLAG00000019208	ddx56	100	84.698	ENSSDUG00000023597	ddx56	100	83.986	Seriola_dumerili
ENSPLAG00000019208	ddx56	100	84.520	ENSSLDG00000018369	ddx56	100	83.808	Seriola_lalandi_dorsalis
ENSPLAG00000019208	ddx56	69	77.586	ENSSARG00000014363	DDX56	77	72.464	Sorex_araneus
ENSPLAG00000019208	ddx56	98	71.923	ENSSPUG00000000784	DDX56	95	71.818	Sphenodon_punctatus
ENSPLAG00000019208	ddx56	95	87.640	ENSSPAG00000009392	ddx56	99	86.891	Stegastes_partitus
ENSPLAG00000019208	ddx56	98	63.768	ENSSSCG00000016745	DDX56	98	64.286	Sus_scrofa
ENSPLAG00000019208	ddx56	100	81.915	ENSTRUG00000018623	ddx56	100	81.206	Takifugu_rubripes
ENSPLAG00000019208	ddx56	100	81.514	ENSTNIG00000013593	ddx56	100	81.162	Tetraodon_nigroviridis
ENSPLAG00000019208	ddx56	99	63.964	ENSTBEG00000007119	DDX56	98	63.604	Tupaia_belangeri
ENSPLAG00000019208	ddx56	83	63.596	ENSTTRG00000010552	DDX56	97	63.596	Tursiops_truncatus
ENSPLAG00000019208	ddx56	97	63.842	ENSUAMG00000014194	DDX56	97	63.653	Ursus_americanus
ENSPLAG00000019208	ddx56	97	63.842	ENSUMAG00000009666	DDX56	97	63.653	Ursus_maritimus
ENSPLAG00000019208	ddx56	93	67.276	ENSVVUG00000011905	DDX56	97	63.071	Vulpes_vulpes
ENSPLAG00000019208	ddx56	99	72.333	ENSXETG00000019000	ddx56	99	72.333	Xenopus_tropicalis
ENSPLAG00000019208	ddx56	100	95.265	ENSXCOG00000017413	ddx56	100	95.265	Xiphophorus_couchianus
ENSPLAG00000019208	ddx56	100	97.491	ENSXMAG00000018749	ddx56	100	97.491	Xiphophorus_maculatus