EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000019434 (Gene tree)
Gene ID: 106955423
Gene Symbol: lsm11
Alias: -
Full Name: LSM11%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 3354 bases
Position: chrKQ546048.1:341224-344577
Accession: 106955423
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000015506	LSM	PF01423.22	1.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000030701	-	1312	XM_015045586	ENSPLAP00000015506	304 (aa)	XP_014901072	UPI00072E8419

Gene Model

Click here to download ENSPLAG00000019434's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019434's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019434	lsm11	50	36.493	ENSCHOG00000010946	LSM11	98	40.777	Choloepus_hoffmanni
ENSPLAG00000019434	lsm11	88	31.095	ENSCSAVG00000011571	-	98	31.095	Ciona_savignyi
ENSPLAG00000019434	lsm11	50	41.748	ENSCANG00000040781	LSM11	98	41.748	Colobus_angolensis_palliatus
ENSPLAG00000019434	lsm11	51	40.000	ENSCGRG00000000197	Lsm11	95	40.000	Cricetulus_griseus_crigri
ENSPLAG00000019434	lsm11	100	63.665	ENSCSEG00000019951	lsm11	100	63.665	Cynoglossus_semilaevis
ENSPLAG00000019434	lsm11	100	69.079	ENSCVAG00000011703	lsm11	100	70.820	Cyprinodon_variegatus
ENSPLAG00000019434	lsm11	50	41.262	ENSMLEG00000027420	LSM11	98	41.262	Mandrillus_leucophaeus
ENSPLAG00000019434	lsm11	100	61.162	ENSMMOG00000009365	lsm11	100	62.963	Mola_mola
ENSPLAG00000019434	lsm11	53	46.286	ENSMLUG00000015930	LSM11	98	46.286	Myotis_lucifugus
ENSPLAG00000019434	lsm11	50	41.262	ENSOGAG00000009059	LSM11	98	41.262	Otolemur_garnettii
ENSPLAG00000019434	lsm11	50	43.137	ENSPSIG00000005234	LSM11	98	43.137	Pelodiscus_sinensis
ENSPLAG00000019434	lsm11	100	62.420	ENSPMGG00000020709	lsm11	100	62.420	Periophthalmus_magnuspinnatus
ENSPLAG00000019434	lsm11	100	99.671	ENSPFOG00000000512	lsm11	98	99.671	Poecilia_formosa
ENSPLAG00000019434	lsm11	100	95.724	ENSPREG00000019696	lsm11	89	95.724	Poecilia_reticulata
ENSPLAG00000019434	lsm11	50	41.262	ENSTBEG00000000992	LSM11	98	41.262	Tupaia_belangeri
ENSPLAG00000019434	lsm11	100	91.148	ENSXMAG00000008238	lsm11	100	91.475	Xiphophorus_maculatus