EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000019536 (Gene tree)
Gene ID: 106954418
Gene Symbol: lsg1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4428 bases
Position: chrKQ545317.1:1195011-1199438
Accession: 106954418
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000029345	MMR_HSR1	PF01926.23	3.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000024246	-	1893	XM_015043929	ENSPLAP00000029345	630 (aa)	XP_014899415	-

Gene Model

Click here to download ENSPLAG00000019536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019536's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019536	lsg1	99	65.564	ENSG00000041802	LSG1	89	79.747	Homo_sapiens
ENSPLAG00000019536	lsg1	100	78.873	ENSAPOG00000009694	lsg1	98	79.133	Acanthochromis_polyacanthus
ENSPLAG00000019536	lsg1	99	62.760	ENSAMEG00000009343	LSG1	97	64.441	Ailuropoda_melanoleuca
ENSPLAG00000019536	lsg1	98	80.128	ENSACIG00000012406	lsg1	97	80.354	Amphilophus_citrinellus
ENSPLAG00000019536	lsg1	100	79.343	ENSAOCG00000016066	lsg1	98	80.096	Amphiprion_ocellaris
ENSPLAG00000019536	lsg1	100	78.873	ENSAPEG00000003252	lsg1	98	79.615	Amphiprion_percula
ENSPLAG00000019536	lsg1	98	82.212	ENSATEG00000011794	lsg1	97	81.965	Anabas_testudineus
ENSPLAG00000019536	lsg1	94	61.156	ENSACAG00000004222	LSG1	99	61.254	Anolis_carolinensis
ENSPLAG00000019536	lsg1	99	65.263	ENSANAG00000021153	LSG1	97	64.806	Aotus_nancymaae
ENSPLAG00000019536	lsg1	100	80.923	ENSACLG00000000520	lsg1	98	81.073	Astatotilapia_calliptera
ENSPLAG00000019536	lsg1	99	72.334	ENSAMXG00000008271	lsg1	98	71.831	Astyanax_mexicanus
ENSPLAG00000019536	lsg1	99	65.244	ENSBTAG00000008461	LSG1	97	66.041	Bos_taurus
ENSPLAG00000019536	lsg1	75	46.364	WBGene00016907	C53H9.2	80	54.918	Caenorhabditis_elegans
ENSPLAG00000019536	lsg1	99	65.263	ENSCJAG00000013962	LSG1	97	64.651	Callithrix_jacchus
ENSPLAG00000019536	lsg1	95	65.391	ENSCAFG00000013445	LSG1	99	64.252	Canis_familiaris
ENSPLAG00000019536	lsg1	99	64.448	ENSCAFG00020002216	LSG1	99	63.867	Canis_lupus_dingo
ENSPLAG00000019536	lsg1	99	65.850	ENSCHIG00000015769	LSG1	97	65.665	Capra_hircus
ENSPLAG00000019536	lsg1	99	63.772	ENSTSYG00000001447	LSG1	97	63.902	Carlito_syrichta
ENSPLAG00000019536	lsg1	95	64.860	ENSCAPG00000009856	LSG1	99	64.860	Cavia_aperea
ENSPLAG00000019536	lsg1	99	65.554	ENSCCAG00000035744	LSG1	97	65.367	Cebus_capucinus
ENSPLAG00000019536	lsg1	99	66.066	ENSCATG00000042060	LSG1	97	64.154	Cercocebus_atys
ENSPLAG00000019536	lsg1	99	65.766	ENSCSAG00000008796	LSG1	89	65.231	Chlorocebus_sabaeus
ENSPLAG00000019536	lsg1	100	65.964	ENSCPBG00000015941	LSG1	82	66.410	Chrysemys_picta_bellii
ENSPLAG00000019536	lsg1	74	52.991	ENSCING00000007079	-	92	58.673	Ciona_intestinalis
ENSPLAG00000019536	lsg1	79	52.652	ENSCSAVG00000002514	-	96	52.823	Ciona_savignyi
ENSPLAG00000019536	lsg1	99	65.263	ENSCANG00000030709	LSG1	97	64.806	Colobus_angolensis_palliatus
ENSPLAG00000019536	lsg1	99	67.241	ENSCGRG00001019846	Lsg1	97	67.363	Cricetulus_griseus_chok1gshd
ENSPLAG00000019536	lsg1	99	65.291	ENSCGRG00000014617	Lsg1	97	65.517	Cricetulus_griseus_crigri
ENSPLAG00000019536	lsg1	98	76.168	ENSCSEG00000008522	lsg1	97	76.056	Cynoglossus_semilaevis
ENSPLAG00000019536	lsg1	97	86.290	ENSCVAG00000002484	lsg1	97	86.129	Cyprinodon_variegatus
ENSPLAG00000019536	lsg1	100	74.062	ENSDARG00000015352	lsg1	97	73.515	Danio_rerio
ENSPLAG00000019536	lsg1	99	64.242	ENSDNOG00000006224	LSG1	97	64.286	Dasypus_novemcinctus
ENSPLAG00000019536	lsg1	99	48.830	FBgn0266284	Ns3	95	48.936	Drosophila_melanogaster
ENSPLAG00000019536	lsg1	88	74.667	ENSETEG00000003888	LSG1	87	77.966	Echinops_telfairi
ENSPLAG00000019536	lsg1	88	55.574	ENSEBUG00000003119	lsg1	85	55.405	Eptatretus_burgeri
ENSPLAG00000019536	lsg1	99	64.468	ENSEASG00005000678	LSG1	97	64.516	Equus_asinus_asinus
ENSPLAG00000019536	lsg1	99	64.627	ENSECAG00000017659	LSG1	97	64.363	Equus_caballus
ENSPLAG00000019536	lsg1	87	59.483	ENSEEUG00000015217	LSG1	75	59.483	Erinaceus_europaeus
ENSPLAG00000019536	lsg1	100	73.065	ENSELUG00000023973	lsg1	98	73.016	Esox_lucius
ENSPLAG00000019536	lsg1	99	64.394	ENSFCAG00000024957	LSG1	97	64.852	Felis_catus
ENSPLAG00000019536	lsg1	92	63.226	ENSFALG00000007210	LSG1	94	62.742	Ficedula_albicollis
ENSPLAG00000019536	lsg1	99	63.706	ENSFDAG00000017373	LSG1	97	65.293	Fukomys_damarensis
ENSPLAG00000019536	lsg1	97	88.853	ENSFHEG00000003680	lsg1	97	88.530	Fundulus_heteroclitus
ENSPLAG00000019536	lsg1	98	69.108	ENSGMOG00000015834	lsg1	97	69.120	Gadus_morhua
ENSPLAG00000019536	lsg1	99	60.483	ENSGALG00000007058	LSG1	86	60.809	Gallus_gallus
ENSPLAG00000019536	lsg1	100	94.603	ENSGAFG00000015831	lsg1	100	94.603	Gambusia_affinis
ENSPLAG00000019536	lsg1	98	78.095	ENSGACG00000009323	lsg1	97	77.990	Gasterosteus_aculeatus
ENSPLAG00000019536	lsg1	99	65.507	ENSGGOG00000000520	LSG1	97	65.116	Gorilla_gorilla
ENSPLAG00000019536	lsg1	100	81.931	ENSHBUG00000005659	lsg1	98	82.109	Haplochromis_burtoni
ENSPLAG00000019536	lsg1	99	63.482	ENSHGLG00000017390	LSG1	97	64.342	Heterocephalus_glaber_female
ENSPLAG00000019536	lsg1	99	63.482	ENSHGLG00100018587	LSG1	97	64.342	Heterocephalus_glaber_male
ENSPLAG00000019536	lsg1	97	79.040	ENSHCOG00000016848	lsg1	97	78.720	Hippocampus_comes
ENSPLAG00000019536	lsg1	100	72.727	ENSIPUG00000008631	lsg1	97	72.800	Ictalurus_punctatus
ENSPLAG00000019536	lsg1	75	61.818	ENSSTOG00000010234	LSG1	92	60.636	Ictidomys_tridecemlineatus
ENSPLAG00000019536	lsg1	99	65.528	ENSJJAG00000015513	Lsg1	97	65.714	Jaculus_jaculus
ENSPLAG00000019536	lsg1	98	78.526	ENSKMAG00000009681	lsg1	97	78.422	Kryptolebias_marmoratus
ENSPLAG00000019536	lsg1	98	76.726	ENSLBEG00000024261	lsg1	97	77.134	Labrus_bergylta
ENSPLAG00000019536	lsg1	100	64.574	ENSLACG00000013399	LSG1	98	65.084	Latimeria_chalumnae
ENSPLAG00000019536	lsg1	98	70.047	ENSLOCG00000004918	lsg1	97	71.722	Lepisosteus_oculatus
ENSPLAG00000019536	lsg1	99	66.361	ENSLAFG00000012919	-	97	66.301	Loxodonta_africana
ENSPLAG00000019536	lsg1	99	65.916	ENSMFAG00000039903	LSG1	97	64.154	Macaca_fascicularis
ENSPLAG00000019536	lsg1	99	65.865	ENSMMUG00000010708	LSG1	97	65.385	Macaca_mulatta
ENSPLAG00000019536	lsg1	99	65.916	ENSMNEG00000031538	LSG1	97	64.154	Macaca_nemestrina
ENSPLAG00000019536	lsg1	99	65.714	ENSMLEG00000041184	LSG1	97	65.385	Mandrillus_leucophaeus
ENSPLAG00000019536	lsg1	100	77.379	ENSMAMG00000000470	lsg1	98	77.600	Mastacembelus_armatus
ENSPLAG00000019536	lsg1	100	81.931	ENSMZEG00005017865	lsg1	98	82.109	Maylandia_zebra
ENSPLAG00000019536	lsg1	88	61.800	ENSMGAG00000007050	LSG1	99	61.290	Meleagris_gallopavo
ENSPLAG00000019536	lsg1	91	65.986	ENSMAUG00000016976	Lsg1	90	66.903	Mesocricetus_auratus
ENSPLAG00000019536	lsg1	99	62.985	ENSMICG00000049087	LSG1	97	63.622	Microcebus_murinus
ENSPLAG00000019536	lsg1	99	65.385	ENSMOCG00000022136	Lsg1	97	65.773	Microtus_ochrogaster
ENSPLAG00000019536	lsg1	86	89.167	ENSMMOG00000008884	lsg1	97	74.355	Mola_mola
ENSPLAG00000019536	lsg1	99	55.982	ENSMODG00000019828	LSG1	97	55.677	Monodelphis_domestica
ENSPLAG00000019536	lsg1	99	65.944	MGP_CAROLIEiJ_G0020648	Lsg1	97	66.349	Mus_caroli
ENSPLAG00000019536	lsg1	99	65.284	ENSMUSG00000022538	Lsg1	97	66.035	Mus_musculus
ENSPLAG00000019536	lsg1	98	66.197	MGP_PahariEiJ_G0016352	Lsg1	97	65.931	Mus_pahari
ENSPLAG00000019536	lsg1	99	65.944	MGP_SPRETEiJ_G0021544	Lsg1	97	66.349	Mus_spretus
ENSPLAG00000019536	lsg1	99	64.848	ENSMPUG00000003734	LSG1	97	65.008	Mustela_putorius_furo
ENSPLAG00000019536	lsg1	99	65.596	ENSMLUG00000012548	LSG1	97	65.204	Myotis_lucifugus
ENSPLAG00000019536	lsg1	99	65.639	ENSNGAG00000021872	Lsg1	97	66.190	Nannospalax_galili
ENSPLAG00000019536	lsg1	99	65.315	ENSNLEG00000008293	LSG1	97	64.651	Nomascus_leucogenys
ENSPLAG00000019536	lsg1	69	71.134	ENSMEUG00000009041	-	85	71.134	Notamacropus_eugenii
ENSPLAG00000019536	lsg1	100	80.864	ENSONIG00000002635	lsg1	98	81.329	Oreochromis_niloticus
ENSPLAG00000019536	lsg1	95	65.862	ENSOANG00000012742	LSG1	99	65.700	Ornithorhynchus_anatinus
ENSPLAG00000019536	lsg1	99	64.275	ENSOCUG00000004817	LSG1	97	64.186	Oryctolagus_cuniculus
ENSPLAG00000019536	lsg1	98	80.551	ENSORLG00000007695	lsg1	97	80.456	Oryzias_latipes
ENSPLAG00000019536	lsg1	98	80.032	ENSORLG00020016286	lsg1	97	80.421	Oryzias_latipes_hni
ENSPLAG00000019536	lsg1	98	79.903	ENSORLG00015012025	lsg1	97	80.000	Oryzias_latipes_hsok
ENSPLAG00000019536	lsg1	98	77.244	ENSOMEG00000022379	lsg1	97	76.973	Oryzias_melastigma
ENSPLAG00000019536	lsg1	99	62.760	ENSOGAG00000003475	LSG1	97	63.411	Otolemur_garnettii
ENSPLAG00000019536	lsg1	99	64.697	ENSOARG00000020403	LSG1	97	65.000	Ovis_aries
ENSPLAG00000019536	lsg1	99	65.658	ENSPPAG00000029271	LSG1	97	65.426	Pan_paniscus
ENSPLAG00000019536	lsg1	99	63.418	ENSPPRG00000010281	LSG1	97	63.359	Panthera_pardus
ENSPLAG00000019536	lsg1	99	64.242	ENSPTIG00000010789	LSG1	97	64.198	Panthera_tigris_altaica
ENSPLAG00000019536	lsg1	99	65.507	ENSPTRG00000015760	LSG1	97	65.271	Pan_troglodytes
ENSPLAG00000019536	lsg1	99	65.465	ENSPANG00000018249	LSG1	97	63.692	Papio_anubis
ENSPLAG00000019536	lsg1	99	72.188	ENSPKIG00000002895	lsg1	97	73.034	Paramormyrops_kingsleyae
ENSPLAG00000019536	lsg1	96	61.215	ENSPSIG00000009821	LSG1	99	61.025	Pelodiscus_sinensis
ENSPLAG00000019536	lsg1	95	77.265	ENSPMGG00000000931	lsg1	100	77.100	Periophthalmus_magnuspinnatus
ENSPLAG00000019536	lsg1	99	64.079	ENSPEMG00000012082	-	97	64.119	Peromyscus_maniculatus_bairdii
ENSPLAG00000019536	lsg1	99	60.746	ENSPMAG00000007451	lsg1	98	60.703	Petromyzon_marinus
ENSPLAG00000019536	lsg1	98	63.492	ENSPCIG00000013890	LSG1	79	63.830	Phascolarctos_cinereus
ENSPLAG00000019536	lsg1	100	98.428	ENSPFOG00000021882	lsg1	100	98.428	Poecilia_formosa
ENSPLAG00000019536	lsg1	100	97.179	ENSPMEG00000017281	lsg1	100	97.179	Poecilia_mexicana
ENSPLAG00000019536	lsg1	97	84.530	ENSPREG00000006048	lsg1	97	84.689	Poecilia_reticulata
ENSPLAG00000019536	lsg1	92	63.934	ENSPPYG00000014425	LSG1	97	63.973	Pongo_abelii
ENSPLAG00000019536	lsg1	89	72.000	ENSPCAG00000005511	LSG1	87	76.271	Procavia_capensis
ENSPLAG00000019536	lsg1	99	64.733	ENSPCOG00000012360	LSG1	97	64.006	Propithecus_coquereli
ENSPLAG00000019536	lsg1	100	80.923	ENSPNYG00000021994	lsg1	98	81.073	Pundamilia_nyererei
ENSPLAG00000019536	lsg1	100	73.053	ENSPNAG00000015533	lsg1	98	73.003	Pygocentrus_nattereri
ENSPLAG00000019536	lsg1	99	63.855	ENSRNOG00000001727	Lsg1	97	64.907	Rattus_norvegicus
ENSPLAG00000019536	lsg1	99	64.706	ENSRBIG00000029053	LSG1	97	64.869	Rhinopithecus_bieti
ENSPLAG00000019536	lsg1	99	64.706	ENSRROG00000037702	LSG1	97	64.869	Rhinopithecus_roxellana
ENSPLAG00000019536	lsg1	82	41.296	YGL099W	LSG1	70	42.126	Saccharomyces_cerevisiae
ENSPLAG00000019536	lsg1	99	64.662	ENSSBOG00000034938	LSG1	97	64.651	Saimiri_boliviensis_boliviensis
ENSPLAG00000019536	lsg1	77	61.217	ENSSHAG00000003487	LSG1	100	61.111	Sarcophilus_harrisii
ENSPLAG00000019536	lsg1	98	71.474	ENSSFOG00015008955	lsg1	97	72.186	Scleropages_formosus
ENSPLAG00000019536	lsg1	98	80.854	ENSSDUG00000004622	lsg1	98	80.922	Seriola_dumerili
ENSPLAG00000019536	lsg1	98	80.032	ENSSLDG00000010869	lsg1	97	80.096	Seriola_lalandi_dorsalis
ENSPLAG00000019536	lsg1	81	66.471	ENSSARG00000012981	LSG1	81	64.067	Sorex_araneus
ENSPLAG00000019536	lsg1	100	65.046	ENSSPUG00000016347	LSG1	97	64.743	Sphenodon_punctatus
ENSPLAG00000019536	lsg1	100	77.918	ENSSPAG00000005508	lsg1	98	79.417	Stegastes_partitus
ENSPLAG00000019536	lsg1	99	64.769	ENSSSCG00000011827	LSG1	97	64.669	Sus_scrofa
ENSPLAG00000019536	lsg1	88	60.738	ENSTGUG00000009068	LSG1	100	60.738	Taeniopygia_guttata
ENSPLAG00000019536	lsg1	97	74.838	ENSTRUG00000017380	lsg1	97	74.838	Takifugu_rubripes
ENSPLAG00000019536	lsg1	97	77.368	ENSTNIG00000015570	lsg1	97	77.368	Tetraodon_nigroviridis
ENSPLAG00000019536	lsg1	99	60.578	ENSTTRG00000000559	LSG1	97	60.469	Tursiops_truncatus
ENSPLAG00000019536	lsg1	99	63.473	ENSUAMG00000012454	LSG1	97	64.852	Ursus_americanus
ENSPLAG00000019536	lsg1	99	63.473	ENSUMAG00000000855	LSG1	97	64.852	Ursus_maritimus
ENSPLAG00000019536	lsg1	95	61.661	ENSVPAG00000012400	LSG1	99	61.182	Vicugna_pacos
ENSPLAG00000019536	lsg1	95	66.074	ENSVVUG00000008956	LSG1	97	64.912	Vulpes_vulpes
ENSPLAG00000019536	lsg1	100	65.284	ENSXETG00000003451	lsg1	98	65.534	Xenopus_tropicalis
ENSPLAG00000019536	lsg1	100	95.563	ENSXCOG00000003239	lsg1	100	95.563	Xiphophorus_couchianus
ENSPLAG00000019536	lsg1	100	93.241	ENSXMAG00000005536	lsg1	100	93.241	Xiphophorus_maculatus