EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000019562 (Gene tree)
Gene ID: 106956160
Gene Symbol: rabl6b
Alias: -
Full Name: RAB%2C member RAS oncogene family like 6
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 18991 bases
Position: chrKQ546108.1:111698-130688
Accession: 106956160
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000015577	MMR_HSR1	PF01926.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000030727	-	4238	XM_015046801	ENSPLAP00000015577	747 (aa)	XP_014902287	-
ENSPLAT00000024248	-	1503	-	ENSPLAP00000029349	500 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000019562's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019562's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019562	rabl6b	100	76.707	ENSACIG00000010721	rabl6b	100	77.540	Amphilophus_citrinellus
ENSPLAG00000019562	rabl6b	100	84.893	ENSATEG00000012055	rabl6b	100	84.893	Anabas_testudineus
ENSPLAG00000019562	rabl6b	100	69.657	ENSCSEG00000012430	-	95	77.253	Cynoglossus_semilaevis
ENSPLAG00000019562	rabl6b	100	78.796	ENSCSEG00000016135	rabl6b	100	78.927	Cynoglossus_semilaevis
ENSPLAG00000019562	rabl6b	100	66.065	ENSELUG00000004448	rabl6b	100	66.367	Esox_lucius
ENSPLAG00000019562	rabl6b	100	85.963	ENSGAFG00000013561	rabl6b	100	82.937	Gambusia_affinis
ENSPLAG00000019562	rabl6b	100	77.097	ENSGACG00000005242	rabl6b	100	78.961	Gasterosteus_aculeatus
ENSPLAG00000019562	rabl6b	100	82.267	ENSHBUG00000014235	rabl6b	100	82.933	Haplochromis_burtoni
ENSPLAG00000019562	rabl6b	100	63.543	ENSIPUG00000019266	rabl6	100	61.278	Ictalurus_punctatus
ENSPLAG00000019562	rabl6b	100	77.036	ENSMAMG00000019516	rabl6b	100	77.437	Mastacembelus_armatus
ENSPLAG00000019562	rabl6b	63	72.842	ENSMZEG00005003942	rabl6b	99	73.895	Maylandia_zebra
ENSPLAG00000019562	rabl6b	64	71.190	ENSMMOG00000009459	rabl6b	97	64.706	Mola_mola
ENSPLAG00000019562	rabl6b	100	84.626	ENSMALG00000002029	rabl6b	100	84.626	Monopterus_albus
ENSPLAG00000019562	rabl6b	63	74.262	ENSNBRG00000012512	rabl6b	99	73.840	Neolamprologus_brichardi
ENSPLAG00000019562	rabl6b	100	80.589	ENSONIG00000010408	rabl6b	100	82.754	Oreochromis_niloticus
ENSPLAG00000019562	rabl6b	100	78.704	ENSORLG00020017557	rabl6b	100	78.704	Oryzias_latipes_hni
ENSPLAG00000019562	rabl6b	89	79.525	ENSORLG00015007848	rabl6b	92	79.583	Oryzias_latipes_hsok
ENSPLAG00000019562	rabl6b	89	81.175	ENSOMEG00000022840	rabl6b	96	80.873	Oryzias_melastigma
ENSPLAG00000019562	rabl6b	100	62.109	ENSPKIG00000007459	RABL6	100	61.479	Paramormyrops_kingsleyae
ENSPLAG00000019562	rabl6b	90	60.589	ENSPCIG00000023722	RABL6	90	59.281	Phascolarctos_cinereus
ENSPLAG00000019562	rabl6b	100	99.866	ENSPFOG00000003250	rabl6b	100	99.866	Poecilia_formosa
ENSPLAG00000019562	rabl6b	100	98.930	ENSPMEG00000020472	rabl6b	100	98.930	Poecilia_mexicana
ENSPLAG00000019562	rabl6b	89	97.605	ENSPREG00000014116	rabl6b	94	97.605	Poecilia_reticulata
ENSPLAG00000019562	rabl6b	90	64.466	ENSPNAG00000010857	rabl6b	92	65.149	Pygocentrus_nattereri
ENSPLAG00000019562	rabl6b	100	64.021	ENSSFOG00015017388	RABL6	100	59.923	Scleropages_formosus
ENSPLAG00000019562	rabl6b	99	64.636	ENSSFOG00015013414	-	99	65.385	Scleropages_formosus
ENSPLAG00000019562	rabl6b	88	83.939	ENSSMAG00000012543	rabl6b	95	83.283	Scophthalmus_maximus
ENSPLAG00000019562	rabl6b	100	83.845	ENSSDUG00000006564	rabl6b	100	85.047	Seriola_dumerili
ENSPLAG00000019562	rabl6b	100	83.021	ENSSPAG00000021033	rabl6b	95	88.253	Stegastes_partitus
ENSPLAG00000019562	rabl6b	99	73.747	ENSTNIG00000010595	rabl6b	100	73.052	Tetraodon_nigroviridis