EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000019585 (Gene tree)
Gene ID: 106939471
Gene Symbol: gfm1
Alias: -
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 27630 bases
Position: chrKQ545400.1:629961-657590
Accession: 106939471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000029379	GTP_EFTU	PF00009.27	4.4e-63	1	1
ENSPLAP00000015584	GTP_EFTU	PF00009.27	5e-63	1	1
ENSPLAP00000029379	GTP_EFTU_D2	PF03144.25	2.5e-17	1	1
ENSPLAP00000015584	GTP_EFTU_D2	PF03144.25	2.8e-17	1	1
ENSPLAP00000029379	EFG_IV	PF03764.18	7.5e-37	1	1
ENSPLAP00000015584	EFG_IV	PF03764.18	8.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000024268	-	2528	XM_015021873	ENSPLAP00000029379	712 (aa)	XP_014877359	-
ENSPLAT00000030732	-	2262	-	ENSPLAP00000015584	753 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000019585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000019585	gfm1	94	34.262	ENSPLAG00000014750	gfm2	95	33.521
ENSPLAG00000019585	gfm1	53	37.143	ENSPLAG00000023710	guf1	62	37.017
ENSPLAG00000019585	gfm1	76	38.926	ENSPLAG00000019123	eef2b	76	38.926
ENSPLAG00000019585	gfm1	75	38.926	ENSPLAG00000009753	-	72	38.926

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019585	gfm1	98	80.401	ENSG00000168827	GFM1	100	93.333	Homo_sapiens
ENSPLAG00000019585	gfm1	98	88.825	ENSAPOG00000016489	gfm1	99	88.825	Acanthochromis_polyacanthus
ENSPLAG00000019585	gfm1	98	81.547	ENSAMEG00000013542	GFM1	98	81.547	Ailuropoda_melanoleuca
ENSPLAG00000019585	gfm1	97	86.357	ENSACIG00000014465	gfm1	94	86.915	Amphilophus_citrinellus
ENSPLAG00000019585	gfm1	100	89.326	ENSAOCG00000006023	gfm1	97	90.055	Amphiprion_ocellaris
ENSPLAG00000019585	gfm1	100	89.185	ENSAPEG00000024499	gfm1	99	89.335	Amphiprion_percula
ENSPLAG00000019585	gfm1	100	90.028	ENSATEG00000013789	gfm1	98	90.450	Anabas_testudineus
ENSPLAG00000019585	gfm1	97	79.826	ENSAPLG00000005022	GFM1	100	80.276	Anas_platyrhynchos
ENSPLAG00000019585	gfm1	97	80.842	ENSACAG00000006829	GFM1	99	80.381	Anolis_carolinensis
ENSPLAG00000019585	gfm1	100	78.741	ENSANAG00000035983	GFM1	97	81.793	Aotus_nancymaae
ENSPLAG00000019585	gfm1	100	91.152	ENSACLG00000016586	gfm1	99	90.771	Astatotilapia_calliptera
ENSPLAG00000019585	gfm1	100	85.955	ENSAMXG00000013435	gfm1	99	86.174	Astyanax_mexicanus
ENSPLAG00000019585	gfm1	96	81.818	ENSBTAG00000027795	GFM1	95	82.312	Bos_taurus
ENSPLAG00000019585	gfm1	95	58.432	WBGene00009246	gfm-1	95	57.444	Caenorhabditis_elegans
ENSPLAG00000019585	gfm1	97	81.014	ENSCJAG00000000363	GFM1	97	81.931	Callithrix_jacchus
ENSPLAG00000019585	gfm1	98	80.802	ENSCAFG00000009006	GFM1	100	82.396	Canis_familiaris
ENSPLAG00000019585	gfm1	98	80.687	ENSCAFG00020005878	GFM1	98	82.869	Canis_lupus_dingo
ENSPLAG00000019585	gfm1	96	82.111	ENSCHIG00000015220	GFM1	95	82.591	Capra_hircus
ENSPLAG00000019585	gfm1	100	79.079	ENSTSYG00000002013	GFM1	98	80.811	Carlito_syrichta
ENSPLAG00000019585	gfm1	96	71.956	ENSCAPG00000005699	GFM1	97	72.514	Cavia_aperea
ENSPLAG00000019585	gfm1	100	79.387	ENSCPOG00000001194	GFM1	96	82.621	Cavia_porcellus
ENSPLAG00000019585	gfm1	97	80.725	ENSCCAG00000025561	GFM1	97	81.655	Cebus_capucinus
ENSPLAG00000019585	gfm1	100	79.301	ENSCATG00000037622	GFM1	97	81.793	Cercocebus_atys
ENSPLAG00000019585	gfm1	97	81.014	ENSCLAG00000002503	GFM1	96	81.931	Chinchilla_lanigera
ENSPLAG00000019585	gfm1	100	79.441	ENSCSAG00000012162	GFM1	97	81.931	Chlorocebus_sabaeus
ENSPLAG00000019585	gfm1	100	70.613	ENSCHOG00000004867	GFM1	98	72.530	Choloepus_hoffmanni
ENSPLAG00000019585	gfm1	100	79.944	ENSCPBG00000018367	GFM1	98	81.471	Chrysemys_picta_bellii
ENSPLAG00000019585	gfm1	95	58.772	ENSCING00000011960	-	93	59.021	Ciona_intestinalis
ENSPLAG00000019585	gfm1	96	59.507	ENSCSAVG00000008514	-	99	59.444	Ciona_savignyi
ENSPLAG00000019585	gfm1	98	80.401	ENSCANG00000031714	GFM1	97	81.655	Colobus_angolensis_palliatus
ENSPLAG00000019585	gfm1	100	79.441	ENSCGRG00001022095	GFM1	95	82.427	Cricetulus_griseus_chok1gshd
ENSPLAG00000019585	gfm1	100	79.441	ENSCGRG00000012043	GFM1	95	82.427	Cricetulus_griseus_crigri
ENSPLAG00000019585	gfm1	97	83.676	ENSCSEG00000017088	gfm1	99	83.676	Cynoglossus_semilaevis
ENSPLAG00000019585	gfm1	100	94.382	ENSCVAG00000004126	gfm1	100	92.877	Cyprinodon_variegatus
ENSPLAG00000019585	gfm1	100	83.567	ENSDARG00000063624	gfm1	99	83.989	Danio_rerio
ENSPLAG00000019585	gfm1	54	80.196	ENSDNOG00000016385	-	100	80.196	Dasypus_novemcinctus
ENSPLAG00000019585	gfm1	98	79.810	ENSDORG00000014165	Gfm1	98	79.810	Dipodomys_ordii
ENSPLAG00000019585	gfm1	95	69.539	FBgn0263133	mEFG1	95	68.829	Drosophila_melanogaster
ENSPLAG00000019585	gfm1	96	73.431	ENSETEG00000019197	GFM1	95	74.341	Echinops_telfairi
ENSPLAG00000019585	gfm1	90	63.693	ENSEBUG00000012794	gfm1	99	63.205	Eptatretus_burgeri
ENSPLAG00000019585	gfm1	95	60.833	ENSEEUG00000000429	GFM1	99	60.833	Erinaceus_europaeus
ENSPLAG00000019585	gfm1	100	85.253	ENSELUG00000014728	gfm1	97	86.878	Esox_lucius
ENSPLAG00000019585	gfm1	97	81.304	ENSFCAG00000013291	GFM1	96	82.069	Felis_catus
ENSPLAG00000019585	gfm1	90	80.148	ENSFALG00000007619	GFM1	100	80.148	Ficedula_albicollis
ENSPLAG00000019585	gfm1	100	78.412	ENSFDAG00000016559	GFM1	96	81.517	Fukomys_damarensis
ENSPLAG00000019585	gfm1	100	94.663	ENSFHEG00000006091	gfm1	99	94.054	Fundulus_heteroclitus
ENSPLAG00000019585	gfm1	96	88.033	ENSGMOG00000010161	gfm1	100	88.033	Gadus_morhua
ENSPLAG00000019585	gfm1	97	80.261	ENSGALG00000009634	GFM1	98	80.663	Gallus_gallus
ENSPLAG00000019585	gfm1	100	96.348	ENSGAFG00000012527	gfm1	99	95.811	Gambusia_affinis
ENSPLAG00000019585	gfm1	100	90.603	ENSGACG00000009864	gfm1	98	90.217	Gasterosteus_aculeatus
ENSPLAG00000019585	gfm1	98	80.401	ENSGGOG00000003085	GFM1	97	81.931	Gorilla_gorilla
ENSPLAG00000019585	gfm1	100	91.152	ENSHBUG00000002120	gfm1	97	92.541	Haplochromis_burtoni
ENSPLAG00000019585	gfm1	97	80.000	ENSHGLG00000016855	GFM1	99	79.223	Heterocephalus_glaber_female
ENSPLAG00000019585	gfm1	97	80.000	ENSHGLG00100013049	GFM1	99	79.223	Heterocephalus_glaber_male
ENSPLAG00000019585	gfm1	100	89.326	ENSHCOG00000007638	gfm1	99	90.000	Hippocampus_comes
ENSPLAG00000019585	gfm1	100	86.236	ENSIPUG00000005873	gfm1	97	87.879	Ictalurus_punctatus
ENSPLAG00000019585	gfm1	98	79.404	ENSSTOG00000010150	GFM1	99	79.404	Ictidomys_tridecemlineatus
ENSPLAG00000019585	gfm1	100	78.741	ENSJJAG00000016447	Gfm1	97	80.880	Jaculus_jaculus
ENSPLAG00000019585	gfm1	100	88.624	ENSKMAG00000020768	gfm1	97	89.394	Kryptolebias_marmoratus
ENSPLAG00000019585	gfm1	95	91.753	ENSLBEG00000021315	gfm1	100	91.441	Labrus_bergylta
ENSPLAG00000019585	gfm1	100	81.601	ENSLACG00000012295	GFM1	98	83.929	Latimeria_chalumnae
ENSPLAG00000019585	gfm1	97	79.856	ENSLOCG00000003778	gfm1	99	80.548	Lepisosteus_oculatus
ENSPLAG00000019585	gfm1	99	77.871	ENSLAFG00000010945	GFM1	100	79.034	Loxodonta_africana
ENSPLAG00000019585	gfm1	100	79.161	ENSMFAG00000035731	GFM1	97	81.793	Macaca_fascicularis
ENSPLAG00000019585	gfm1	100	79.161	ENSMMUG00000004961	GFM1	97	81.793	Macaca_mulatta
ENSPLAG00000019585	gfm1	100	79.161	ENSMNEG00000033245	GFM1	97	81.517	Macaca_nemestrina
ENSPLAG00000019585	gfm1	97	79.589	ENSMLEG00000030908	GFM1	99	79.730	Mandrillus_leucophaeus
ENSPLAG00000019585	gfm1	100	89.607	ENSMAMG00000011760	gfm1	97	90.608	Mastacembelus_armatus
ENSPLAG00000019585	gfm1	100	91.292	ENSMZEG00005016639	gfm1	97	92.541	Maylandia_zebra
ENSPLAG00000019585	gfm1	97	80.087	ENSMGAG00000010641	GFM1	97	80.525	Meleagris_gallopavo
ENSPLAG00000019585	gfm1	100	79.580	ENSMAUG00000000611	Gfm1	96	82.044	Mesocricetus_auratus
ENSPLAG00000019585	gfm1	97	81.884	ENSMICG00000049086	GFM1	96	82.621	Microcebus_murinus
ENSPLAG00000019585	gfm1	100	79.580	ENSMOCG00000000465	Gfm1	96	82.754	Microtus_ochrogaster
ENSPLAG00000019585	gfm1	97	90.659	ENSMMOG00000012538	gfm1	98	90.659	Mola_mola
ENSPLAG00000019585	gfm1	99	78.723	ENSMODG00000015673	GFM1	97	80.525	Monodelphis_domestica
ENSPLAG00000019585	gfm1	96	87.812	ENSMALG00000012508	gfm1	95	88.424	Monopterus_albus
ENSPLAG00000019585	gfm1	100	79.860	MGP_CAROLIEiJ_G0025052	Gfm1	100	80.150	Mus_caroli
ENSPLAG00000019585	gfm1	100	79.580	ENSMUSG00000027774	Gfm1	95	82.845	Mus_musculus
ENSPLAG00000019585	gfm1	100	79.301	MGP_PahariEiJ_G0026495	Gfm1	100	79.775	Mus_pahari
ENSPLAG00000019585	gfm1	100	79.580	MGP_SPRETEiJ_G0025994	Gfm1	100	79.775	Mus_spretus
ENSPLAG00000019585	gfm1	97	82.029	ENSMPUG00000002859	GFM1	96	82.483	Mustela_putorius_furo
ENSPLAG00000019585	gfm1	97	81.594	ENSMLUG00000000452	GFM1	96	82.483	Myotis_lucifugus
ENSPLAG00000019585	gfm1	100	79.132	ENSNGAG00000012375	Gfm1	97	81.492	Nannospalax_galili
ENSPLAG00000019585	gfm1	97	91.474	ENSNBRG00000004631	gfm1	99	92.403	Neolamprologus_brichardi
ENSPLAG00000019585	gfm1	97	81.159	ENSNLEG00000004176	GFM1	97	81.793	Nomascus_leucogenys
ENSPLAG00000019585	gfm1	95	72.781	ENSMEUG00000007784	GFM1	99	72.781	Notamacropus_eugenii
ENSPLAG00000019585	gfm1	100	79.243	ENSOPRG00000009860	GFM1	98	80.907	Ochotona_princeps
ENSPLAG00000019585	gfm1	96	82.483	ENSODEG00000004316	GFM1	96	82.483	Octodon_degus
ENSPLAG00000019585	gfm1	100	91.433	ENSONIG00000003772	gfm1	97	92.680	Oreochromis_niloticus
ENSPLAG00000019585	gfm1	98	81.375	ENSOCUG00000013561	GFM1	96	82.507	Oryctolagus_cuniculus
ENSPLAG00000019585	gfm1	94	91.808	ENSORLG00000006487	gfm1	100	91.808	Oryzias_latipes
ENSPLAG00000019585	gfm1	100	90.871	ENSORLG00020003362	gfm1	97	91.713	Oryzias_latipes_hni
ENSPLAG00000019585	gfm1	100	90.169	ENSORLG00015005829	gfm1	97	91.298	Oryzias_latipes_hsok
ENSPLAG00000019585	gfm1	100	91.433	ENSOMEG00000012894	gfm1	97	92.127	Oryzias_melastigma
ENSPLAG00000019585	gfm1	96	81.793	ENSOGAG00000008298	GFM1	96	81.793	Otolemur_garnettii
ENSPLAG00000019585	gfm1	95	82.222	ENSOARG00000002409	GFM1	99	81.831	Ovis_aries
ENSPLAG00000019585	gfm1	98	80.401	ENSPPAG00000033881	GFM1	97	81.931	Pan_paniscus
ENSPLAG00000019585	gfm1	97	81.304	ENSPPRG00000009281	GFM1	96	82.069	Panthera_pardus
ENSPLAG00000019585	gfm1	97	81.304	ENSPTIG00000012416	GFM1	96	81.931	Panthera_tigris_altaica
ENSPLAG00000019585	gfm1	98	80.401	ENSPTRG00000015570	GFM1	97	81.931	Pan_troglodytes
ENSPLAG00000019585	gfm1	100	79.161	ENSPANG00000016512	GFM1	97	81.655	Papio_anubis
ENSPLAG00000019585	gfm1	100	83.708	ENSPKIG00000004876	gfm1	97	85.201	Paramormyrops_kingsleyae
ENSPLAG00000019585	gfm1	100	79.637	ENSPSIG00000012567	GFM1	98	81.335	Pelodiscus_sinensis
ENSPLAG00000019585	gfm1	96	87.310	ENSPMGG00000014068	gfm1	100	87.310	Periophthalmus_magnuspinnatus
ENSPLAG00000019585	gfm1	100	79.301	ENSPEMG00000008942	Gfm1	95	82.706	Peromyscus_maniculatus_bairdii
ENSPLAG00000019585	gfm1	91	78.295	ENSPCIG00000020195	GFM1	98	79.745	Phascolarctos_cinereus
ENSPLAG00000019585	gfm1	100	99.017	ENSPFOG00000011022	gfm1	98	98.505	Poecilia_formosa
ENSPLAG00000019585	gfm1	100	98.876	ENSPMEG00000012376	gfm1	98	98.370	Poecilia_mexicana
ENSPLAG00000019585	gfm1	100	98.034	ENSPREG00000001332	gfm1	94	97.297	Poecilia_reticulata
ENSPLAG00000019585	gfm1	98	80.258	ENSPPYG00000014244	GFM1	97	81.655	Pongo_abelii
ENSPLAG00000019585	gfm1	94	79.610	ENSPCAG00000008934	GFM1	100	80.085	Procavia_capensis
ENSPLAG00000019585	gfm1	98	80.659	ENSPCOG00000022259	GFM1	98	80.455	Propithecus_coquereli
ENSPLAG00000019585	gfm1	97	80.870	ENSPVAG00000013605	GFM1	96	81.655	Pteropus_vampyrus
ENSPLAG00000019585	gfm1	100	90.871	ENSPNYG00000006037	gfm1	98	92.403	Pundamilia_nyererei
ENSPLAG00000019585	gfm1	100	85.815	ENSPNAG00000001237	gfm1	99	87.110	Pygocentrus_nattereri
ENSPLAG00000019585	gfm1	97	80.987	ENSRNOG00000012873	Gfm1	95	82.287	Rattus_norvegicus
ENSPLAG00000019585	gfm1	98	80.401	ENSRBIG00000031363	GFM1	97	81.655	Rhinopithecus_bieti
ENSPLAG00000019585	gfm1	98	80.544	ENSRROG00000031081	GFM1	97	81.793	Rhinopithecus_roxellana
ENSPLAG00000019585	gfm1	94	57.270	YLR069C	-	90	56.772	Saccharomyces_cerevisiae
ENSPLAG00000019585	gfm1	100	78.741	ENSSBOG00000023252	GFM1	97	81.793	Saimiri_boliviensis_boliviensis
ENSPLAG00000019585	gfm1	97	80.697	ENSSHAG00000017772	GFM1	98	80.654	Sarcophilus_harrisii
ENSPLAG00000019585	gfm1	100	83.590	ENSSFOG00015003117	gfm1	99	84.786	Scleropages_formosus
ENSPLAG00000019585	gfm1	100	88.624	ENSSMAG00000013221	gfm1	98	89.086	Scophthalmus_maximus
ENSPLAG00000019585	gfm1	100	90.449	ENSSDUG00000018665	gfm1	99	89.879	Seriola_dumerili
ENSPLAG00000019585	gfm1	100	90.309	ENSSLDG00000020606	gfm1	99	89.744	Seriola_lalandi_dorsalis
ENSPLAG00000019585	gfm1	99	78.094	ENSSPUG00000018686	GFM1	100	78.349	Sphenodon_punctatus
ENSPLAG00000019585	gfm1	100	92.275	ENSSPAG00000008800	gfm1	97	93.232	Stegastes_partitus
ENSPLAG00000019585	gfm1	98	80.597	ENSSSCG00000025651	GFM1	98	80.597	Sus_scrofa
ENSPLAG00000019585	gfm1	100	88.062	ENSTRUG00000009244	gfm1	97	89.779	Takifugu_rubripes
ENSPLAG00000019585	gfm1	100	89.888	ENSTNIG00000007729	gfm1	98	90.574	Tetraodon_nigroviridis
ENSPLAG00000019585	gfm1	89	73.481	ENSTBEG00000017404	GFM1	89	73.481	Tupaia_belangeri
ENSPLAG00000019585	gfm1	96	81.672	ENSTTRG00000001735	GFM1	95	82.312	Tursiops_truncatus
ENSPLAG00000019585	gfm1	97	81.739	ENSUAMG00000026381	GFM1	96	82.345	Ursus_americanus
ENSPLAG00000019585	gfm1	97	81.739	ENSUMAG00000011268	GFM1	96	82.345	Ursus_maritimus
ENSPLAG00000019585	gfm1	97	77.649	ENSVPAG00000009444	GFM1	96	78.453	Vicugna_pacos
ENSPLAG00000019585	gfm1	98	80.603	ENSVVUG00000020091	GFM1	100	82.101	Vulpes_vulpes
ENSPLAG00000019585	gfm1	100	80.168	ENSXETG00000032551	GFM1	97	82.041	Xenopus_tropicalis
ENSPLAG00000019585	gfm1	57	93.300	ENSXCOG00000012590	gfm1	93	93.300	Xiphophorus_couchianus
ENSPLAG00000019585	gfm1	100	97.051	ENSXMAG00000000261	gfm1	99	96.216	Xiphophorus_maculatus