EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000019648 (Gene tree)
Gene ID: 106948746
Gene Symbol: thoc1
Alias: -
Full Name: THO complex 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 13210 bases
Position: chrKQ545333.1:395476-408685
Accession: 106948746
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000015672	efThoc1	PF11957.8	1.5e-142	1	1
ENSPLAP00000029443	efThoc1	PF11957.8	1.5e-142	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000024408	-	3204	-	ENSPLAP00000029443	654 (aa)	-	UPI00072EEFCF
ENSPLAT00000024404	-	3219	XM_015034589	ENSPLAP00000015672	654 (aa)	XP_014890075	UPI00072EEFCF

Gene Model

Click here to download ENSPLAG00000019648's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019648's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019648	thoc1	99	72.086	ENSG00000079134	THOC1	99	78.676	Homo_sapiens
ENSPLAG00000019648	thoc1	99	72.393	ENSAMEG00000006645	THOC1	98	72.393	Ailuropoda_melanoleuca
ENSPLAG00000019648	thoc1	98	84.796	ENSACIG00000019392	thoc1	95	88.762	Amphilophus_citrinellus
ENSPLAG00000019648	thoc1	100	86.391	ENSAOCG00000008391	thoc1	100	86.391	Amphiprion_ocellaris
ENSPLAG00000019648	thoc1	100	91.590	ENSAPEG00000001093	thoc1	100	91.590	Amphiprion_percula
ENSPLAG00000019648	thoc1	100	90.061	ENSATEG00000004783	thoc1	100	90.061	Anabas_testudineus
ENSPLAG00000019648	thoc1	98	71.672	ENSAPLG00000016149	THOC1	97	71.672	Anas_platyrhynchos
ENSPLAG00000019648	thoc1	99	71.254	ENSACAG00000008307	THOC1	96	70.642	Anolis_carolinensis
ENSPLAG00000019648	thoc1	99	71.472	ENSANAG00000033200	THOC1	98	71.472	Aotus_nancymaae
ENSPLAG00000019648	thoc1	100	89.755	ENSACLG00000016836	thoc1	100	89.755	Astatotilapia_calliptera
ENSPLAG00000019648	thoc1	94	75.478	ENSAMXG00000014708	thoc1	98	74.801	Astyanax_mexicanus
ENSPLAG00000019648	thoc1	99	72.393	ENSBTAG00000019215	THOC1	98	72.393	Bos_taurus
ENSPLAG00000019648	thoc1	69	34.698	WBGene00020172	thoc-1	69	34.690	Caenorhabditis_elegans
ENSPLAG00000019648	thoc1	99	72.239	ENSCJAG00000020450	THOC1	98	72.239	Callithrix_jacchus
ENSPLAG00000019648	thoc1	99	72.393	ENSCAFG00000018324	THOC1	98	72.393	Canis_familiaris
ENSPLAG00000019648	thoc1	99	72.393	ENSCAFG00020017894	THOC1	98	72.393	Canis_lupus_dingo
ENSPLAG00000019648	thoc1	99	72.393	ENSCHIG00000015399	THOC1	98	73.428	Capra_hircus
ENSPLAG00000019648	thoc1	99	72.086	ENSTSYG00000010585	THOC1	98	72.086	Carlito_syrichta
ENSPLAG00000019648	thoc1	97	50.855	ENSCAPG00000016270	THOC1	97	50.855	Cavia_aperea
ENSPLAG00000019648	thoc1	99	71.166	ENSCPOG00000000959	THOC1	98	71.166	Cavia_porcellus
ENSPLAG00000019648	thoc1	99	72.239	ENSCCAG00000025766	THOC1	98	72.239	Cebus_capucinus
ENSPLAG00000019648	thoc1	99	69.939	ENSCATG00000028180	THOC1	96	76.012	Cercocebus_atys
ENSPLAG00000019648	thoc1	97	72.956	ENSCLAG00000009117	THOC1	99	72.956	Chinchilla_lanigera
ENSPLAG00000019648	thoc1	99	72.239	ENSCSAG00000017631	THOC1	98	72.239	Chlorocebus_sabaeus
ENSPLAG00000019648	thoc1	78	76.250	ENSCHOG00000010609	THOC1	77	76.250	Choloepus_hoffmanni
ENSPLAG00000019648	thoc1	99	72.741	ENSCPBG00000027558	THOC1	99	72.741	Chrysemys_picta_bellii
ENSPLAG00000019648	thoc1	74	46.465	ENSCING00000007663	-	99	46.479	Ciona_intestinalis
ENSPLAG00000019648	thoc1	94	47.943	ENSCSAVG00000010649	-	100	47.943	Ciona_savignyi
ENSPLAG00000019648	thoc1	99	72.086	ENSCANG00000034265	THOC1	96	76.385	Colobus_angolensis_palliatus
ENSPLAG00000019648	thoc1	99	71.319	ENSCGRG00001016464	Thoc1	98	71.319	Cricetulus_griseus_chok1gshd
ENSPLAG00000019648	thoc1	90	59.593	ENSCGRG00000003390	-	98	59.593	Cricetulus_griseus_crigri
ENSPLAG00000019648	thoc1	99	71.517	ENSCGRG00000010269	-	99	72.484	Cricetulus_griseus_crigri
ENSPLAG00000019648	thoc1	99	86.322	ENSCSEG00000012486	thoc1	99	87.621	Cynoglossus_semilaevis
ENSPLAG00000019648	thoc1	100	92.508	ENSCVAG00000020600	thoc1	100	92.508	Cyprinodon_variegatus
ENSPLAG00000019648	thoc1	100	82.137	ENSDARG00000088246	thoc1	100	82.137	Danio_rerio
ENSPLAG00000019648	thoc1	99	72.197	ENSDNOG00000019217	THOC1	98	72.197	Dasypus_novemcinctus
ENSPLAG00000019648	thoc1	97	68.239	ENSDORG00000008060	Thoc1	98	68.239	Dipodomys_ordii
ENSPLAG00000019648	thoc1	98	37.249	FBgn0037382	Hpr1	74	42.182	Drosophila_melanogaster
ENSPLAG00000019648	thoc1	90	55.272	ENSETEG00000004165	THOC1	98	55.272	Echinops_telfairi
ENSPLAG00000019648	thoc1	92	62.957	ENSEBUG00000005998	thoc1	97	63.727	Eptatretus_burgeri
ENSPLAG00000019648	thoc1	99	72.086	ENSEASG00005002549	THOC1	94	71.472	Equus_asinus_asinus
ENSPLAG00000019648	thoc1	99	72.239	ENSECAG00000009267	THOC1	88	72.239	Equus_caballus
ENSPLAG00000019648	thoc1	79	58.156	ENSEEUG00000012214	-	81	58.156	Erinaceus_europaeus
ENSPLAG00000019648	thoc1	100	84.018	ENSELUG00000023277	thoc1	100	84.018	Esox_lucius
ENSPLAG00000019648	thoc1	99	72.699	ENSFCAG00000022454	THOC1	85	72.699	Felis_catus
ENSPLAG00000019648	thoc1	97	72.231	ENSFALG00000006205	THOC1	99	72.231	Ficedula_albicollis
ENSPLAG00000019648	thoc1	98	72.050	ENSFDAG00000006842	THOC1	99	72.050	Fukomys_damarensis
ENSPLAG00000019648	thoc1	100	93.119	ENSFHEG00000008841	thoc1	100	93.119	Fundulus_heteroclitus
ENSPLAG00000019648	thoc1	99	85.429	ENSGMOG00000011486	thoc1	99	85.429	Gadus_morhua
ENSPLAG00000019648	thoc1	99	71.669	ENSGALG00000014915	THOC1	99	70.802	Gallus_gallus
ENSPLAG00000019648	thoc1	100	97.706	ENSGAFG00000021464	thoc1	100	97.706	Gambusia_affinis
ENSPLAG00000019648	thoc1	100	88.379	ENSGACG00000017361	thoc1	100	88.379	Gasterosteus_aculeatus
ENSPLAG00000019648	thoc1	99	73.047	ENSGAGG00000021230	-	97	73.047	Gopherus_agassizii
ENSPLAG00000019648	thoc1	99	72.239	ENSGGOG00000003013	THOC1	98	72.239	Gorilla_gorilla
ENSPLAG00000019648	thoc1	100	90.061	ENSHBUG00000009096	thoc1	100	90.061	Haplochromis_burtoni
ENSPLAG00000019648	thoc1	99	71.779	ENSHGLG00000003712	-	98	71.779	Heterocephalus_glaber_female
ENSPLAG00000019648	thoc1	70	65.482	ENSHGLG00000009264	-	98	68.649	Heterocephalus_glaber_female
ENSPLAG00000019648	thoc1	77	58.201	ENSHGLG00100002225	-	98	58.201	Heterocephalus_glaber_male
ENSPLAG00000019648	thoc1	99	71.626	ENSHGLG00100003570	THOC1	98	71.626	Heterocephalus_glaber_male
ENSPLAG00000019648	thoc1	91	80.755	ENSIPUG00000005306	thoc1	99	79.773	Ictalurus_punctatus
ENSPLAG00000019648	thoc1	99	72.239	ENSSTOG00000006484	THOC1	98	72.239	Ictidomys_tridecemlineatus
ENSPLAG00000019648	thoc1	52	72.965	ENSJJAG00000014893	-	96	72.965	Jaculus_jaculus
ENSPLAG00000019648	thoc1	100	90.520	ENSKMAG00000003904	thoc1	100	90.520	Kryptolebias_marmoratus
ENSPLAG00000019648	thoc1	100	90.061	ENSLBEG00000020372	thoc1	98	90.061	Labrus_bergylta
ENSPLAG00000019648	thoc1	99	72.435	ENSLACG00000014869	THOC1	99	72.129	Latimeria_chalumnae
ENSPLAG00000019648	thoc1	100	81.279	ENSLOCG00000002097	thoc1	99	80.974	Lepisosteus_oculatus
ENSPLAG00000019648	thoc1	99	72.239	ENSLAFG00000009585	THOC1	98	72.239	Loxodonta_africana
ENSPLAG00000019648	thoc1	99	72.239	ENSMFAG00000041520	THOC1	98	72.239	Macaca_fascicularis
ENSPLAG00000019648	thoc1	99	72.239	ENSMMUG00000004662	THOC1	98	72.239	Macaca_mulatta
ENSPLAG00000019648	thoc1	99	72.239	ENSMNEG00000040177	THOC1	98	72.239	Macaca_nemestrina
ENSPLAG00000019648	thoc1	99	72.239	ENSMLEG00000034201	THOC1	98	72.239	Mandrillus_leucophaeus
ENSPLAG00000019648	thoc1	96	88.198	ENSMAMG00000016747	thoc1	100	88.198	Mastacembelus_armatus
ENSPLAG00000019648	thoc1	100	89.755	ENSMZEG00005024609	thoc1	100	89.755	Maylandia_zebra
ENSPLAG00000019648	thoc1	97	71.987	ENSMGAG00000009811	THOC1	99	71.987	Meleagris_gallopavo
ENSPLAG00000019648	thoc1	99	70.859	ENSMAUG00000010272	Thoc1	98	70.859	Mesocricetus_auratus
ENSPLAG00000019648	thoc1	99	72.393	ENSMICG00000027200	THOC1	98	72.393	Microcebus_murinus
ENSPLAG00000019648	thoc1	99	70.399	ENSMOCG00000014536	-	85	70.399	Microtus_ochrogaster
ENSPLAG00000019648	thoc1	99	62.500	ENSMOCG00000014924	-	96	61.890	Microtus_ochrogaster
ENSPLAG00000019648	thoc1	93	89.869	ENSMMOG00000011772	thoc1	100	89.869	Mola_mola
ENSPLAG00000019648	thoc1	99	71.125	ENSMODG00000021482	THOC1	98	71.125	Monodelphis_domestica
ENSPLAG00000019648	thoc1	100	89.144	ENSMALG00000021872	thoc1	100	89.144	Monopterus_albus
ENSPLAG00000019648	thoc1	99	70.859	MGP_CAROLIEiJ_G0021989	Thoc1	98	70.859	Mus_caroli
ENSPLAG00000019648	thoc1	99	71.012	ENSMUSG00000024287	Thoc1	98	71.012	Mus_musculus
ENSPLAG00000019648	thoc1	99	71.012	MGP_PahariEiJ_G0018726	Thoc1	98	71.012	Mus_pahari
ENSPLAG00000019648	thoc1	99	71.012	MGP_SPRETEiJ_G0022905	Thoc1	98	71.012	Mus_spretus
ENSPLAG00000019648	thoc1	99	72.393	ENSMPUG00000005448	THOC1	98	72.393	Mustela_putorius_furo
ENSPLAG00000019648	thoc1	61	65.163	ENSMLUG00000024912	-	100	65.163	Myotis_lucifugus
ENSPLAG00000019648	thoc1	90	66.443	ENSMLUG00000027965	-	99	66.779	Myotis_lucifugus
ENSPLAG00000019648	thoc1	99	71.166	ENSMLUG00000004090	-	98	71.166	Myotis_lucifugus
ENSPLAG00000019648	thoc1	97	57.457	ENSNGAG00000008061	-	97	57.457	Nannospalax_galili
ENSPLAG00000019648	thoc1	99	71.626	ENSNGAG00000001401	-	98	71.626	Nannospalax_galili
ENSPLAG00000019648	thoc1	98	87.618	ENSNBRG00000005991	thoc1	97	87.618	Neolamprologus_brichardi
ENSPLAG00000019648	thoc1	99	72.239	ENSNLEG00000006835	THOC1	98	72.239	Nomascus_leucogenys
ENSPLAG00000019648	thoc1	89	76.017	ENSMEUG00000009756	THOC1	82	76.017	Notamacropus_eugenii
ENSPLAG00000019648	thoc1	99	57.669	ENSOPRG00000001108	THOC1	98	57.669	Ochotona_princeps
ENSPLAG00000019648	thoc1	99	66.564	ENSODEG00000006623	THOC1	98	66.564	Octodon_degus
ENSPLAG00000019648	thoc1	100	89.908	ENSONIG00000009440	thoc1	98	89.862	Oreochromis_niloticus
ENSPLAG00000019648	thoc1	99	72.239	ENSOCUG00000011601	THOC1	98	72.239	Oryctolagus_cuniculus
ENSPLAG00000019648	thoc1	100	89.755	ENSORLG00000017629	thoc1	100	89.755	Oryzias_latipes
ENSPLAG00000019648	thoc1	100	89.908	ENSORLG00020007567	thoc1	100	89.908	Oryzias_latipes_hni
ENSPLAG00000019648	thoc1	100	89.755	ENSORLG00015007356	thoc1	100	89.755	Oryzias_latipes_hsok
ENSPLAG00000019648	thoc1	100	88.532	ENSOMEG00000008200	thoc1	100	88.379	Oryzias_melastigma
ENSPLAG00000019648	thoc1	99	69.172	ENSOGAG00000000470	THOC1	98	69.172	Otolemur_garnettii
ENSPLAG00000019648	thoc1	98	73.239	ENSOARG00000009238	THOC1	96	73.239	Ovis_aries
ENSPLAG00000019648	thoc1	99	72.239	ENSPPAG00000031812	THOC1	98	72.239	Pan_paniscus
ENSPLAG00000019648	thoc1	99	72.086	ENSPPRG00000023794	THOC1	96	76.590	Panthera_pardus
ENSPLAG00000019648	thoc1	99	72.086	ENSPTIG00000007469	THOC1	96	76.590	Panthera_tigris_altaica
ENSPLAG00000019648	thoc1	99	71.320	ENSPTRG00000009816	THOC1	98	71.320	Pan_troglodytes
ENSPLAG00000019648	thoc1	99	71.341	ENSPANG00000008665	THOC1	98	71.341	Papio_anubis
ENSPLAG00000019648	thoc1	100	81.832	ENSPKIG00000005906	thoc1	99	82.722	Paramormyrops_kingsleyae
ENSPLAG00000019648	thoc1	81	75.568	ENSPSIG00000007691	THOC1	97	75.568	Pelodiscus_sinensis
ENSPLAG00000019648	thoc1	96	82.698	ENSPMGG00000008279	thoc1	96	82.698	Periophthalmus_magnuspinnatus
ENSPLAG00000019648	thoc1	99	70.859	ENSPEMG00000021789	Thoc1	98	70.859	Peromyscus_maniculatus_bairdii
ENSPLAG00000019648	thoc1	74	72.041	ENSPCIG00000026942	THOC1	97	72.041	Phascolarctos_cinereus
ENSPLAG00000019648	thoc1	100	99.235	ENSPFOG00000011673	thoc1	100	99.235	Poecilia_formosa
ENSPLAG00000019648	thoc1	100	99.083	ENSPMEG00000007083	thoc1	100	99.083	Poecilia_mexicana
ENSPLAG00000019648	thoc1	100	98.777	ENSPREG00000006719	thoc1	100	98.777	Poecilia_reticulata
ENSPLAG00000019648	thoc1	74	75.720	ENSPPYG00000009049	-	98	75.720	Pongo_abelii
ENSPLAG00000019648	thoc1	91	73.706	ENSPCAG00000005320	THOC1	91	73.706	Procavia_capensis
ENSPLAG00000019648	thoc1	99	71.626	ENSPCOG00000009234	THOC1	98	71.626	Propithecus_coquereli
ENSPLAG00000019648	thoc1	99	70.245	ENSPVAG00000004007	THOC1	98	70.245	Pteropus_vampyrus
ENSPLAG00000019648	thoc1	100	90.061	ENSPNYG00000019152	thoc1	100	90.061	Pundamilia_nyererei
ENSPLAG00000019648	thoc1	99	82.389	ENSPNAG00000023390	thoc1	99	82.083	Pygocentrus_nattereri
ENSPLAG00000019648	thoc1	81	58.633	ENSRNOG00000015332	Thoc1	94	58.633	Rattus_norvegicus
ENSPLAG00000019648	thoc1	99	71.472	ENSRBIG00000033738	THOC1	99	74.003	Rhinopithecus_bieti
ENSPLAG00000019648	thoc1	99	72.239	ENSRROG00000044988	THOC1	96	76.385	Rhinopithecus_roxellana
ENSPLAG00000019648	thoc1	99	71.933	ENSSBOG00000016556	THOC1	98	71.933	Saimiri_boliviensis_boliviensis
ENSPLAG00000019648	thoc1	99	72.086	ENSSHAG00000014829	THOC1	98	72.086	Sarcophilus_harrisii
ENSPLAG00000019648	thoc1	100	84.862	ENSSFOG00015021527	thoc1	100	84.862	Scleropages_formosus
ENSPLAG00000019648	thoc1	100	87.519	ENSSMAG00000018465	thoc1	99	87.519	Scophthalmus_maximus
ENSPLAG00000019648	thoc1	100	90.520	ENSSDUG00000016810	thoc1	100	90.520	Seriola_dumerili
ENSPLAG00000019648	thoc1	100	90.673	ENSSLDG00000015555	thoc1	100	90.673	Seriola_lalandi_dorsalis
ENSPLAG00000019648	thoc1	87	71.815	ENSSARG00000006910	THOC1	86	71.815	Sorex_araneus
ENSPLAG00000019648	thoc1	98	71.540	ENSSPUG00000007238	THOC1	98	71.231	Sphenodon_punctatus
ENSPLAG00000019648	thoc1	100	86.585	ENSSPAG00000018847	thoc1	99	86.585	Stegastes_partitus
ENSPLAG00000019648	thoc1	99	72.393	ENSSSCG00000025653	THOC1	93	72.393	Sus_scrofa
ENSPLAG00000019648	thoc1	99	71.822	ENSTGUG00000010204	THOC1	99	71.822	Taeniopygia_guttata
ENSPLAG00000019648	thoc1	100	88.073	ENSTRUG00000013518	thoc1	100	88.073	Takifugu_rubripes
ENSPLAG00000019648	thoc1	100	87.003	ENSTNIG00000008473	thoc1	99	87.003	Tetraodon_nigroviridis
ENSPLAG00000019648	thoc1	99	65.031	ENSTBEG00000016920	THOC1	98	65.031	Tupaia_belangeri
ENSPLAG00000019648	thoc1	99	66.258	ENSTTRG00000016664	THOC1	98	66.258	Tursiops_truncatus
ENSPLAG00000019648	thoc1	99	72.546	ENSUAMG00000002527	THOC1	98	72.613	Ursus_americanus
ENSPLAG00000019648	thoc1	99	72.546	ENSUMAG00000019693	THOC1	98	72.546	Ursus_maritimus
ENSPLAG00000019648	thoc1	67	65.417	ENSVPAG00000003726	-	66	65.417	Vicugna_pacos
ENSPLAG00000019648	thoc1	99	72.393	ENSVVUG00000004384	THOC1	98	72.393	Vulpes_vulpes
ENSPLAG00000019648	thoc1	99	70.365	ENSXETG00000003155	thoc1	97	70.365	Xenopus_tropicalis
ENSPLAG00000019648	thoc1	96	90.415	ENSXCOG00000016085	thoc1	91	89.984	Xiphophorus_couchianus
ENSPLAG00000019648	thoc1	100	98.012	ENSXMAG00000002353	thoc1	100	98.012	Xiphophorus_maculatus