EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000019688 (Gene tree)
Gene ID: 106964934
Gene Symbol: si:dkey-13a21.4
Alias: -
Full Name: ras-related protein Rab-7a-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 2982 bases
Position: chrKQ547048.1:50738-53719
Accession: 106964934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000029457	MMR_HSR1	PF01926.23	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000030776	-	1912	XM_015060725	ENSPLAP00000029457	204 (aa)	XP_014916211	UPI0004444064

Gene Model

Click here to download ENSPLAG00000019688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019688's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000019688	si:dkey-13a21.4	79	50.617	ENSPLAG00000006777	-	73	50.617
ENSPLAG00000019688	si:dkey-13a21.4	96	32.836	ENSPLAG00000019570	rab6a	94	32.836
ENSPLAG00000019688	si:dkey-13a21.4	79	35.583	ENSPLAG00000023374	rab2a	75	35.583
ENSPLAG00000019688	si:dkey-13a21.4	88	34.426	ENSPLAG00000022991	rab34a	64	34.426
ENSPLAG00000019688	si:dkey-13a21.4	83	42.353	ENSPLAG00000020989	rab35b	82	42.353
ENSPLAG00000019688	si:dkey-13a21.4	79	34.146	ENSPLAG00000013594	rab12	66	34.146
ENSPLAG00000019688	si:dkey-13a21.4	81	51.807	ENSPLAG00000007015	rab9a	78	51.807
ENSPLAG00000019688	si:dkey-13a21.4	85	34.286	ENSPLAG00000022515	-	80	34.286
ENSPLAG00000019688	si:dkey-13a21.4	83	50.877	ENSPLAG00000011866	rab9b	77	50.877
ENSPLAG00000019688	si:dkey-13a21.4	77	32.911	ENSPLAG00000014243	rab11ba	71	32.911
ENSPLAG00000019688	si:dkey-13a21.4	77	31.210	ENSPLAG00000015685	rabl2	68	31.210
ENSPLAG00000019688	si:dkey-13a21.4	77	34.177	ENSPLAG00000011175	rab11a	74	34.177
ENSPLAG00000019688	si:dkey-13a21.4	99	34.450	ENSPLAG00000000376	rab41	97	34.450
ENSPLAG00000019688	si:dkey-13a21.4	79	31.707	ENSPLAG00000002600	RAB29	77	31.707
ENSPLAG00000019688	si:dkey-13a21.4	84	35.838	ENSPLAG00000006354	rab15	79	35.838
ENSPLAG00000019688	si:dkey-13a21.4	79	33.742	ENSPLAG00000016333	-	73	33.742
ENSPLAG00000019688	si:dkey-13a21.4	81	51.807	ENSPLAG00000022926	rab9a	82	51.807
ENSPLAG00000019688	si:dkey-13a21.4	83	34.884	ENSPLAG00000018655	rab1ba	80	35.152
ENSPLAG00000019688	si:dkey-13a21.4	76	35.032	ENSPLAG00000008845	dnajc27	58	35.032
ENSPLAG00000019688	si:dkey-13a21.4	79	35.583	ENSPLAG00000004790	rab5c	72	35.583
ENSPLAG00000019688	si:dkey-13a21.4	85	33.714	ENSPLAG00000004551	-	80	33.714
ENSPLAG00000019688	si:dkey-13a21.4	82	35.714	ENSPLAG00000005832	RAB13	88	35.714
ENSPLAG00000019688	si:dkey-13a21.4	90	40.000	ENSPLAG00000015383	rab30	89	40.000
ENSPLAG00000019688	si:dkey-13a21.4	80	36.970	ENSPLAG00000015592	-	80	36.970
ENSPLAG00000019688	si:dkey-13a21.4	91	36.559	ENSPLAG00000011697	rab23	77	36.559
ENSPLAG00000019688	si:dkey-13a21.4	79	36.420	ENSPLAG00000003181	-	79	36.420
ENSPLAG00000019688	si:dkey-13a21.4	97	50.249	ENSPLAG00000002799	RAB7A	97	50.249
ENSPLAG00000019688	si:dkey-13a21.4	87	53.371	ENSPLAG00000001065	-	86	53.371
ENSPLAG00000019688	si:dkey-13a21.4	77	32.911	ENSPLAG00000014207	-	71	32.911
ENSPLAG00000019688	si:dkey-13a21.4	88	33.880	ENSPLAG00000005074	rab34b	71	33.880
ENSPLAG00000019688	si:dkey-13a21.4	80	36.970	ENSPLAG00000006520	rab1ab	79	36.970
ENSPLAG00000019688	si:dkey-13a21.4	80	34.132	ENSPLAG00000007986	rab11al	75	34.132
ENSPLAG00000019688	si:dkey-13a21.4	77	38.365	ENSPLAG00000018322	-	73	38.365
ENSPLAG00000019688	si:dkey-13a21.4	77	37.736	ENSPLAG00000018718	rab22a	80	37.736
ENSPLAG00000019688	si:dkey-13a21.4	74	36.538	ENSPLAG00000016172	-	64	36.538
ENSPLAG00000019688	si:dkey-13a21.4	80	36.970	ENSPLAG00000017232	rab22a	88	36.970
ENSPLAG00000019688	si:dkey-13a21.4	77	38.365	ENSPLAG00000005628	rab42a	72	38.365
ENSPLAG00000019688	si:dkey-13a21.4	79	35.583	ENSPLAG00000017838	rab5aa	74	35.583
ENSPLAG00000019688	si:dkey-13a21.4	71	31.034	ENSPLAG00000009352	KRAS	80	32.051
ENSPLAG00000019688	si:dkey-13a21.4	73	38.000	ENSPLAG00000021278	rab33ba	61	38.000
ENSPLAG00000019688	si:dkey-13a21.4	96	34.804	ENSPLAG00000005189	rab33a	88	34.804
ENSPLAG00000019688	si:dkey-13a21.4	87	36.517	ENSPLAG00000005869	zgc:171927	80	36.517
ENSPLAG00000019688	si:dkey-13a21.4	82	36.095	ENSPLAG00000023128	RAB15	79	36.095
ENSPLAG00000019688	si:dkey-13a21.4	76	39.355	ENSPLAG00000010104	rab18a	75	39.355
ENSPLAG00000019688	si:dkey-13a21.4	80	30.723	ENSPLAG00000003951	rasd4	75	30.723
ENSPLAG00000019688	si:dkey-13a21.4	77	32.911	ENSPLAG00000001598	rab11bb	71	32.911
ENSPLAG00000019688	si:dkey-13a21.4	71	31.724	ENSPLAG00000003379	hrasb	80	32.692
ENSPLAG00000019688	si:dkey-13a21.4	83	36.471	ENSPLAG00000021043	si:dkey-16l2.16	79	36.471
ENSPLAG00000019688	si:dkey-13a21.4	75	30.968	ENSPLAG00000015650	rhebl1	82	30.968
ENSPLAG00000019688	si:dkey-13a21.4	77	34.810	ENSPLAG00000003558	rab25a	75	34.615
ENSPLAG00000019688	si:dkey-13a21.4	96	33.333	ENSPLAG00000022260	rab6ba	94	33.333
ENSPLAG00000019688	si:dkey-13a21.4	77	38.125	ENSPLAG00000007237	RAB39B	74	38.125
ENSPLAG00000019688	si:dkey-13a21.4	96	32.836	ENSPLAG00000019707	rab6bb	94	32.836
ENSPLAG00000019688	si:dkey-13a21.4	75	31.613	ENSPLAG00000001529	rheb	82	31.613
ENSPLAG00000019688	si:dkey-13a21.4	75	37.179	ENSPLAG00000020627	zgc:101559	65	37.179
ENSPLAG00000019688	si:dkey-13a21.4	76	41.290	ENSPLAG00000019136	rab18b	74	41.290
ENSPLAG00000019688	si:dkey-13a21.4	77	36.646	ENSPLAG00000007773	si:dkey-34d22.5	71	36.646
ENSPLAG00000019688	si:dkey-13a21.4	84	36.416	ENSPLAG00000008004	rab25b	80	36.416
ENSPLAG00000019688	si:dkey-13a21.4	75	30.435	ENSPLAG00000002398	rasl11b	64	30.435
ENSPLAG00000019688	si:dkey-13a21.4	88	34.254	ENSPLAG00000014563	rab4a	83	34.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019688	si:dkey-13a21.4	100	82.843	ENSACIG00000011024	si:dkey-13a21.4	100	82.843	Amphilophus_citrinellus
ENSPLAG00000019688	si:dkey-13a21.4	100	82.353	ENSAOCG00000020491	si:dkey-13a21.4	100	82.353	Amphiprion_ocellaris
ENSPLAG00000019688	si:dkey-13a21.4	100	82.353	ENSAPEG00000023338	si:dkey-13a21.4	92	82.353	Amphiprion_percula
ENSPLAG00000019688	si:dkey-13a21.4	100	80.392	ENSATEG00000014958	si:dkey-13a21.4	100	80.392	Anabas_testudineus
ENSPLAG00000019688	si:dkey-13a21.4	96	51.795	ENSACAG00000012345	-	97	51.795	Anolis_carolinensis
ENSPLAG00000019688	si:dkey-13a21.4	100	82.843	ENSACLG00000021109	si:dkey-13a21.4	99	82.843	Astatotilapia_calliptera
ENSPLAG00000019688	si:dkey-13a21.4	100	51.659	ENSAMXG00000032663	si:dkey-13a21.4	97	51.659	Astyanax_mexicanus
ENSPLAG00000019688	si:dkey-13a21.4	89	53.005	WBGene00004271	rab-7	100	48.325	Caenorhabditis_elegans
ENSPLAG00000019688	si:dkey-13a21.4	100	91.176	ENSCVAG00000001150	si:dkey-13a21.4	100	91.176	Cyprinodon_variegatus
ENSPLAG00000019688	si:dkey-13a21.4	100	61.765	ENSDARG00000026098	si:dkey-13a21.4	99	61.765	Danio_rerio
ENSPLAG00000019688	si:dkey-13a21.4	87	50.000	ENSDNOG00000043559	-	96	47.475	Dasypus_novemcinctus
ENSPLAG00000019688	si:dkey-13a21.4	100	88.293	ENSFHEG00000002502	si:dkey-13a21.4	100	88.293	Fundulus_heteroclitus
ENSPLAG00000019688	si:dkey-13a21.4	100	98.039	ENSGAFG00000020102	si:dkey-13a21.4	100	98.039	Gambusia_affinis
ENSPLAG00000019688	si:dkey-13a21.4	100	83.333	ENSHBUG00000014023	si:dkey-13a21.4	99	83.333	Haplochromis_burtoni
ENSPLAG00000019688	si:dkey-13a21.4	86	80.682	ENSKMAG00000021039	si:dkey-13a21.4	74	80.682	Kryptolebias_marmoratus
ENSPLAG00000019688	si:dkey-13a21.4	100	82.843	ENSLBEG00000018180	si:dkey-13a21.4	100	82.843	Labrus_bergylta
ENSPLAG00000019688	si:dkey-13a21.4	100	58.252	ENSLOCG00000014749	si:dkey-13a21.4	100	58.252	Lepisosteus_oculatus
ENSPLAG00000019688	si:dkey-13a21.4	84	55.556	ENSLAFG00000028984	-	83	55.556	Loxodonta_africana
ENSPLAG00000019688	si:dkey-13a21.4	100	81.373	ENSMAMG00000021095	si:dkey-13a21.4	100	81.373	Mastacembelus_armatus
ENSPLAG00000019688	si:dkey-13a21.4	100	82.843	ENSMZEG00005010220	si:dkey-13a21.4	99	82.843	Maylandia_zebra
ENSPLAG00000019688	si:dkey-13a21.4	99	83.168	ENSNBRG00000023214	si:dkey-13a21.4	98	83.168	Neolamprologus_brichardi
ENSPLAG00000019688	si:dkey-13a21.4	100	82.843	ENSONIG00000020296	si:dkey-13a21.4	100	82.843	Oreochromis_niloticus
ENSPLAG00000019688	si:dkey-13a21.4	100	79.412	ENSORLG00000025098	si:dkey-13a21.4	100	79.412	Oryzias_latipes
ENSPLAG00000019688	si:dkey-13a21.4	100	79.902	ENSORLG00020019465	si:dkey-13a21.4	100	79.902	Oryzias_latipes_hni
ENSPLAG00000019688	si:dkey-13a21.4	100	79.902	ENSORLG00015015121	si:dkey-13a21.4	100	79.902	Oryzias_latipes_hsok
ENSPLAG00000019688	si:dkey-13a21.4	96	61.929	ENSPKIG00000008691	si:dkey-13a21.4	96	61.929	Paramormyrops_kingsleyae
ENSPLAG00000019688	si:dkey-13a21.4	99	75.248	ENSPMGG00000023170	si:dkey-13a21.4	96	75.248	Periophthalmus_magnuspinnatus
ENSPLAG00000019688	si:dkey-13a21.4	100	100.000	ENSPFOG00000015409	si:dkey-13a21.4	100	100.000	Poecilia_formosa
ENSPLAG00000019688	si:dkey-13a21.4	100	100.000	ENSPMEG00000019159	si:dkey-13a21.4	100	100.000	Poecilia_mexicana
ENSPLAG00000019688	si:dkey-13a21.4	100	97.549	ENSPREG00000022241	si:dkey-13a21.4	100	97.549	Poecilia_reticulata
ENSPLAG00000019688	si:dkey-13a21.4	100	82.843	ENSPNYG00000018613	si:dkey-13a21.4	99	82.843	Pundamilia_nyererei
ENSPLAG00000019688	si:dkey-13a21.4	96	43.781	YML001W	YPT7	96	43.781	Saccharomyces_cerevisiae
ENSPLAG00000019688	si:dkey-13a21.4	96	60.714	ENSSFOG00015009566	si:dkey-13a21.4	96	60.714	Scleropages_formosus
ENSPLAG00000019688	si:dkey-13a21.4	99	80.296	ENSSMAG00000013945	si:dkey-13a21.4	99	80.296	Scophthalmus_maximus
ENSPLAG00000019688	si:dkey-13a21.4	100	84.314	ENSSDUG00000019738	si:dkey-13a21.4	100	84.314	Seriola_dumerili
ENSPLAG00000019688	si:dkey-13a21.4	100	84.314	ENSSLDG00000011597	si:dkey-13a21.4	100	84.314	Seriola_lalandi_dorsalis
ENSPLAG00000019688	si:dkey-13a21.4	96	53.333	ENSXETG00000014257	mgc75872	97	53.333	Xenopus_tropicalis