EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000019778 (Gene tree)
Gene ID: 106949497
Gene Symbol: vars2
Alias: -
Full Name: valine--tRNA ligase%2C mitochondrial-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 28286 bases
Position: chrKQ545663.1:88230-116515
Accession: 106949497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000029462	tRNA-synt_1g	PF09334.11	6e-14	1	1
ENSPLAP00000029462	Anticodon_1	PF08264.13	5e-33	1	1
ENSPLAP00000029462	tRNA-synt_1	PF00133.22	1.6e-193	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000024468	-	3478	XM_015035761	ENSPLAP00000029462	1074 (aa)	XP_014891247	UPI00072EAA74

Gene Model

Click here to download ENSPLAG00000019778's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019778's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000019778	vars2	97	46.547	ENSPLAG00000009590	vars	80	47.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019778	vars2	95	77.539	ENSAPOG00000007396	vars2	99	76.382	Acanthochromis_polyacanthus
ENSPLAG00000019778	vars2	96	51.064	ENSAMEG00000012997	VARS2	89	52.032	Ailuropoda_melanoleuca
ENSPLAG00000019778	vars2	99	74.651	ENSACIG00000004344	vars2	99	74.651	Amphilophus_citrinellus
ENSPLAG00000019778	vars2	95	77.832	ENSAOCG00000000476	vars2	99	76.664	Amphiprion_ocellaris
ENSPLAG00000019778	vars2	95	77.832	ENSAPEG00000008646	vars2	96	76.664	Amphiprion_percula
ENSPLAG00000019778	vars2	95	78.244	ENSATEG00000012291	vars2	99	76.923	Anabas_testudineus
ENSPLAG00000019778	vars2	97	52.042	ENSACAG00000022093	VARS2	91	53.724	Anolis_carolinensis
ENSPLAG00000019778	vars2	96	50.628	ENSANAG00000038018	VARS2	92	51.533	Aotus_nancymaae
ENSPLAG00000019778	vars2	99	74.115	ENSACLG00000018673	vars2	99	74.115	Astatotilapia_calliptera
ENSPLAG00000019778	vars2	96	67.885	ENSAMXG00000017773	vars2	93	70.514	Astyanax_mexicanus
ENSPLAG00000019778	vars2	96	51.697	ENSBTAG00000010698	VARS2	92	52.632	Bos_taurus
ENSPLAG00000019778	vars2	96	50.435	ENSCJAG00000019826	VARS2	92	51.434	Callithrix_jacchus
ENSPLAG00000019778	vars2	99	50.371	ENSCAFG00000000454	VARS2	92	52.433	Canis_familiaris
ENSPLAG00000019778	vars2	86	54.866	ENSCAFG00020019387	VARS2	89	56.697	Canis_lupus_dingo
ENSPLAG00000019778	vars2	96	51.503	ENSCHIG00000007847	VARS2	92	52.122	Capra_hircus
ENSPLAG00000019778	vars2	96	51.891	ENSTSYG00000009904	VARS2	92	52.679	Carlito_syrichta
ENSPLAG00000019778	vars2	89	53.095	ENSCAPG00000017770	VARS2	99	53.095	Cavia_aperea
ENSPLAG00000019778	vars2	99	50.968	ENSCPOG00000021834	VARS2	93	52.544	Cavia_porcellus
ENSPLAG00000019778	vars2	96	50.628	ENSCCAG00000037907	VARS2	92	51.632	Cebus_capucinus
ENSPLAG00000019778	vars2	96	51.115	ENSCATG00000032554	VARS2	92	52.135	Cercocebus_atys
ENSPLAG00000019778	vars2	98	50.141	ENSCLAG00000002889	VARS2	92	52.036	Chinchilla_lanigera
ENSPLAG00000019778	vars2	95	51.711	ENSCSAG00000008327	VARS2	91	52.753	Chlorocebus_sabaeus
ENSPLAG00000019778	vars2	92	55.263	ENSCPBG00000021502	VARS2	87	64.526	Chrysemys_picta_bellii
ENSPLAG00000019778	vars2	96	50.727	ENSCANG00000014991	VARS2	91	51.738	Colobus_angolensis_palliatus
ENSPLAG00000019778	vars2	96	51.697	ENSCGRG00001021535	Vars2	92	52.532	Cricetulus_griseus_chok1gshd
ENSPLAG00000019778	vars2	96	51.697	ENSCGRG00000014112	Vars2	92	52.532	Cricetulus_griseus_crigri
ENSPLAG00000019778	vars2	97	63.439	ENSCSEG00000015432	vars2	90	75.980	Cynoglossus_semilaevis
ENSPLAG00000019778	vars2	66	82.394	ENSCVAG00000017765	vars2	98	82.394	Cyprinodon_variegatus
ENSPLAG00000019778	vars2	99	65.517	ENSDARG00000056717	vars2	95	67.586	Danio_rerio
ENSPLAG00000019778	vars2	81	49.541	ENSDORG00000008516	Vars2	93	49.541	Dipodomys_ordii
ENSPLAG00000019778	vars2	98	45.576	ENSETEG00000014844	VARS2	93	46.033	Echinops_telfairi
ENSPLAG00000019778	vars2	99	49.677	ENSEASG00005019997	VARS2	94	54.812	Equus_asinus_asinus
ENSPLAG00000019778	vars2	99	49.954	ENSECAG00000018202	VARS2	92	52.234	Equus_caballus
ENSPLAG00000019778	vars2	64	60.784	ENSEEUG00000012591	-	62	60.784	Erinaceus_europaeus
ENSPLAG00000019778	vars2	99	66.728	ENSELUG00000017824	vars2	99	66.728	Esox_lucius
ENSPLAG00000019778	vars2	99	49.815	ENSFCAG00000010531	VARS2	92	51.728	Felis_catus
ENSPLAG00000019778	vars2	96	51.406	ENSFDAG00000017216	VARS2	93	51.714	Fukomys_damarensis
ENSPLAG00000019778	vars2	93	79.485	ENSFHEG00000013932	vars2	98	79.485	Fundulus_heteroclitus
ENSPLAG00000019778	vars2	90	68.290	ENSGMOG00000018960	vars2	99	68.290	Gadus_morhua
ENSPLAG00000019778	vars2	93	89.939	ENSGAFG00000004737	vars2	100	89.939	Gambusia_affinis
ENSPLAG00000019778	vars2	94	74.851	ENSGACG00000001464	vars2	99	74.851	Gasterosteus_aculeatus
ENSPLAG00000019778	vars2	92	54.940	ENSGAGG00000011652	VARS2	98	54.940	Gopherus_agassizii
ENSPLAG00000019778	vars2	96	51.309	ENSGGOG00000014587	VARS2	92	52.334	Gorilla_gorilla
ENSPLAG00000019778	vars2	99	71.895	ENSHBUG00000002448	vars2	100	71.895	Haplochromis_burtoni
ENSPLAG00000019778	vars2	98	49.439	ENSHGLG00000012886	VARS2	90	51.028	Heterocephalus_glaber_female
ENSPLAG00000019778	vars2	98	49.346	ENSHGLG00100016535	VARS2	93	50.930	Heterocephalus_glaber_male
ENSPLAG00000019778	vars2	70	71.979	ENSHCOG00000017907	vars2	99	71.979	Hippocampus_comes
ENSPLAG00000019778	vars2	94	67.882	ENSIPUG00000015573	Vars2	99	65.645	Ictalurus_punctatus
ENSPLAG00000019778	vars2	99	49.170	ENSSTOG00000009924	VARS2	93	51.224	Ictidomys_tridecemlineatus
ENSPLAG00000019778	vars2	97	49.713	ENSJJAG00000011144	Vars2	92	50.988	Jaculus_jaculus
ENSPLAG00000019778	vars2	100	76.930	ENSKMAG00000001393	vars2	100	77.135	Kryptolebias_marmoratus
ENSPLAG00000019778	vars2	52	79.785	ENSLBEG00000005480	-	81	79.891	Labrus_bergylta
ENSPLAG00000019778	vars2	99	70.203	ENSLBEG00000011949	vars2	99	70.203	Labrus_bergylta
ENSPLAG00000019778	vars2	96	48.811	ENSLACG00000001576	-	96	49.610	Latimeria_chalumnae
ENSPLAG00000019778	vars2	99	50.092	ENSLAFG00000015183	VARS2	93	51.322	Loxodonta_africana
ENSPLAG00000019778	vars2	96	51.115	ENSMFAG00000042367	VARS2	92	52.135	Macaca_fascicularis
ENSPLAG00000019778	vars2	96	51.212	ENSMMUG00000018609	VARS2	92	52.234	Macaca_mulatta
ENSPLAG00000019778	vars2	96	51.212	ENSMNEG00000043163	VARS2	92	52.234	Macaca_nemestrina
ENSPLAG00000019778	vars2	96	51.212	ENSMLEG00000041728	VARS2	89	52.234	Mandrillus_leucophaeus
ENSPLAG00000019778	vars2	96	75.024	ENSMAMG00000020339	vars2	95	75.024	Mastacembelus_armatus
ENSPLAG00000019778	vars2	99	74.022	ENSMZEG00005017669	vars2	99	74.022	Maylandia_zebra
ENSPLAG00000019778	vars2	99	50.601	ENSMAUG00000018946	Vars2	92	52.423	Mesocricetus_auratus
ENSPLAG00000019778	vars2	83	54.465	ENSMICG00000005365	VARS2	92	57.641	Microcebus_murinus
ENSPLAG00000019778	vars2	99	46.303	ENSMOCG00000014607	Vars2	84	56.647	Microtus_ochrogaster
ENSPLAG00000019778	vars2	94	74.162	ENSMMOG00000012122	vars2	99	71.881	Mola_mola
ENSPLAG00000019778	vars2	94	50.144	ENSMODG00000015848	VARS2	91	51.476	Monodelphis_domestica
ENSPLAG00000019778	vars2	94	74.359	ENSMALG00000009217	vars2	100	74.359	Monopterus_albus
ENSPLAG00000019778	vars2	99	49.954	MGP_CAROLIEiJ_G0021529	Vars2	97	54.419	Mus_caroli
ENSPLAG00000019778	vars2	99	50.000	ENSMUSG00000038838	Vars2	93	55.495	Mus_musculus
ENSPLAG00000019778	vars2	96	51.406	MGP_PahariEiJ_G0020523	Vars2	93	55.315	Mus_pahari
ENSPLAG00000019778	vars2	99	50.093	MGP_SPRETEiJ_G0022436	Vars2	97	54.246	Mus_spretus
ENSPLAG00000019778	vars2	97	50.999	ENSMPUG00000011643	VARS2	92	52.433	Mustela_putorius_furo
ENSPLAG00000019778	vars2	94	51.524	ENSMLUG00000002356	VARS2	89	51.738	Myotis_lucifugus
ENSPLAG00000019778	vars2	96	47.495	ENSNGAG00000020607	Vars2	93	47.801	Nannospalax_galili
ENSPLAG00000019778	vars2	64	67.680	ENSNBRG00000001624	vars2	58	67.680	Neolamprologus_brichardi
ENSPLAG00000019778	vars2	95	51.032	ENSNLEG00000005625	VARS2	89	52.064	Nomascus_leucogenys
ENSPLAG00000019778	vars2	80	57.167	ENSMEUG00000014475	VARS2	89	57.167	Notamacropus_eugenii
ENSPLAG00000019778	vars2	86	57.955	ENSOPRG00000000682	VARS2	82	65.772	Ochotona_princeps
ENSPLAG00000019778	vars2	94	51.639	ENSODEG00000017965	VARS2	92	51.837	Octodon_degus
ENSPLAG00000019778	vars2	94	57.018	ENSONIG00000004734	vars2	100	57.018	Oreochromis_niloticus
ENSPLAG00000019778	vars2	72	42.416	ENSOANG00000000398	-	91	42.416	Ornithorhynchus_anatinus
ENSPLAG00000019778	vars2	99	46.984	ENSOCUG00000021496	VARS2	59	49.164	Oryctolagus_cuniculus
ENSPLAG00000019778	vars2	95	72.710	ENSORLG00000010632	vars2	99	70.965	Oryzias_latipes
ENSPLAG00000019778	vars2	94	73.465	ENSORLG00020018584	vars2	93	73.465	Oryzias_latipes_hni
ENSPLAG00000019778	vars2	94	73.267	ENSORLG00015010408	vars2	94	72.585	Oryzias_latipes_hsok
ENSPLAG00000019778	vars2	96	72.427	ENSOMEG00000008360	vars2	94	72.559	Oryzias_melastigma
ENSPLAG00000019778	vars2	96	51.307	ENSOGAG00000006087	VARS2	89	52.230	Otolemur_garnettii
ENSPLAG00000019778	vars2	96	50.969	ENSOARG00000010844	VARS2	91	51.578	Ovis_aries
ENSPLAG00000019778	vars2	96	51.309	ENSPPAG00000041141	VARS2	92	52.234	Pan_paniscus
ENSPLAG00000019778	vars2	99	49.907	ENSPPRG00000006751	VARS2	90	51.925	Panthera_pardus
ENSPLAG00000019778	vars2	99	49.815	ENSPTIG00000017799	VARS2	97	51.629	Panthera_tigris_altaica
ENSPLAG00000019778	vars2	96	51.309	ENSPTRG00000034497	VARS2	92	52.234	Pan_troglodytes
ENSPLAG00000019778	vars2	96	51.212	ENSPANG00000018481	VARS2	92	53.189	Papio_anubis
ENSPLAG00000019778	vars2	96	66.087	ENSPKIG00000011372	vars2	99	64.531	Paramormyrops_kingsleyae
ENSPLAG00000019778	vars2	59	62.047	ENSPSIG00000006206	VARS2	95	60.448	Pelodiscus_sinensis
ENSPLAG00000019778	vars2	98	68.985	ENSPMGG00000000465	vars2	94	70.907	Periophthalmus_magnuspinnatus
ENSPLAG00000019778	vars2	96	51.299	ENSPEMG00000014691	Vars2	93	52.020	Peromyscus_maniculatus_bairdii
ENSPLAG00000019778	vars2	98	49.814	ENSPCIG00000015040	VARS2	92	51.980	Phascolarctos_cinereus
ENSPLAG00000019778	vars2	99	97.670	ENSPFOG00000017616	vars2	99	97.670	Poecilia_formosa
ENSPLAG00000019778	vars2	100	99.258	ENSPMEG00000011123	vars2	100	99.258	Poecilia_mexicana
ENSPLAG00000019778	vars2	97	87.250	ENSPREG00000014998	vars2	99	87.250	Poecilia_reticulata
ENSPLAG00000019778	vars2	96	51.309	ENSPPYG00000016424	VARS2	92	52.334	Pongo_abelii
ENSPLAG00000019778	vars2	63	53.923	ENSPCAG00000006946	VARS2	68	53.923	Procavia_capensis
ENSPLAG00000019778	vars2	99	48.758	ENSPCOG00000014839	VARS2	91	50.293	Propithecus_coquereli
ENSPLAG00000019778	vars2	96	50.432	ENSPVAG00000004197	VARS2	93	50.930	Pteropus_vampyrus
ENSPLAG00000019778	vars2	87	80.323	ENSPNYG00000010314	vars2	100	80.323	Pundamilia_nyererei
ENSPLAG00000019778	vars2	97	67.370	ENSPNAG00000026793	vars2	97	66.635	Pygocentrus_nattereri
ENSPLAG00000019778	vars2	99	50.000	ENSRNOG00000000833	Vars2	92	51.980	Rattus_norvegicus
ENSPLAG00000019778	vars2	93	51.948	ENSRBIG00000032725	VARS2	91	52.048	Rhinopithecus_bieti
ENSPLAG00000019778	vars2	96	50.727	ENSRROG00000043847	VARS2	92	51.738	Rhinopithecus_roxellana
ENSPLAG00000019778	vars2	96	49.574	ENSSBOG00000033240	VARS2	90	50.532	Saimiri_boliviensis_boliviensis
ENSPLAG00000019778	vars2	99	50.832	ENSSHAG00000009307	VARS2	99	50.555	Sarcophilus_harrisii
ENSPLAG00000019778	vars2	97	65.742	ENSSFOG00015016187	vars2	94	66.536	Scleropages_formosus
ENSPLAG00000019778	vars2	91	83.401	ENSSMAG00000020842	vars2	99	77.352	Scophthalmus_maximus
ENSPLAG00000019778	vars2	95	78.168	ENSSDUG00000011598	vars2	99	76.525	Seriola_dumerili
ENSPLAG00000019778	vars2	92	77.901	ENSSLDG00000015492	vars2	99	74.146	Seriola_lalandi_dorsalis
ENSPLAG00000019778	vars2	79	59.459	ENSSPUG00000014700	VARS2	87	59.459	Sphenodon_punctatus
ENSPLAG00000019778	vars2	99	74.143	ENSSPAG00000004654	vars2	100	73.216	Stegastes_partitus
ENSPLAG00000019778	vars2	96	52.182	ENSSSCG00000001384	VARS2	93	54.727	Sus_scrofa
ENSPLAG00000019778	vars2	95	71.722	ENSTRUG00000005264	vars2	96	72.141	Takifugu_rubripes
ENSPLAG00000019778	vars2	97	68.061	ENSTNIG00000005916	vars2	98	67.195	Tetraodon_nigroviridis
ENSPLAG00000019778	vars2	81	55.233	ENSTTRG00000012243	VARS2	80	62.162	Tursiops_truncatus
ENSPLAG00000019778	vars2	97	50.760	ENSUAMG00000026124	VARS2	99	52.548	Ursus_americanus
ENSPLAG00000019778	vars2	97	50.809	ENSUMAG00000019894	VARS2	93	51.518	Ursus_maritimus
ENSPLAG00000019778	vars2	99	50.093	ENSVVUG00000010754	VARS2	87	52.234	Vulpes_vulpes
ENSPLAG00000019778	vars2	89	51.242	ENSXETG00000003036	vars2	98	51.242	Xenopus_tropicalis
ENSPLAG00000019778	vars2	97	89.800	ENSXCOG00000003455	vars2	99	89.800	Xiphophorus_couchianus
ENSPLAG00000019778	vars2	100	91.111	ENSXMAG00000013523	vars2	100	91.111	Xiphophorus_maculatus