EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000019842 (Gene tree)
Gene ID: 106936206
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 5652 bases
Position: chrKQ547405.1:17027-22678
Accession: 106936206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000015832	PRP38	PF03371.15	1.8e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000024605	-	2320	XM_015017055	ENSPLAP00000015832	463 (aa)	XP_014872541	UPI00072E87A0

Gene Model

Click here to download ENSPLAG00000019842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019842	-	100	84.731	ENSATEG00000014482	-	100	84.516	Anabas_testudineus
ENSPLAG00000019842	-	59	84.783	ENSBTAG00000047874	PRPF38B	85	61.925	Bos_taurus
ENSPLAG00000019842	-	58	46.468	WBGene00022434	Y108G3AL.2	66	50.463	Caenorhabditis_elegans
ENSPLAG00000019842	-	59	71.014	ENSCAFG00020010992	-	81	55.319	Canis_lupus_dingo
ENSPLAG00000019842	-	59	84.783	ENSCHIG00000024357	-	85	61.925	Capra_hircus
ENSPLAG00000019842	-	59	85.145	ENSCPOG00000039545	-	82	63.656	Cavia_porcellus
ENSPLAG00000019842	-	59	84.727	ENSCLAG00000005801	-	82	62.821	Chinchilla_lanigera
ENSPLAG00000019842	-	51	73.950	ENSCHOG00000008972	-	98	59.773	Choloepus_hoffmanni
ENSPLAG00000019842	-	100	79.399	ENSCSEG00000015030	-	100	80.472	Cynoglossus_semilaevis
ENSPLAG00000019842	-	59	82.909	ENSETEG00000014690	-	85	68.814	Echinops_telfairi
ENSPLAG00000019842	-	100	62.333	ENSELUG00000010390	-	97	69.674	Esox_lucius
ENSPLAG00000019842	-	100	76.050	ENSGMOG00000012080	-	99	75.840	Gadus_morhua
ENSPLAG00000019842	-	99	60.465	ENSGALG00000001972	-	92	62.008	Gallus_gallus
ENSPLAG00000019842	-	100	98.488	ENSGAFG00000008943	-	100	98.488	Gambusia_affinis
ENSPLAG00000019842	-	99	63.241	ENSGAGG00000001563	-	83	64.544	Gopherus_agassizii
ENSPLAG00000019842	-	59	85.766	ENSHGLG00000016583	PRPF38B	82	63.113	Heterocephalus_glaber_female
ENSPLAG00000019842	-	59	85.766	ENSHGLG00100015525	-	82	62.900	Heterocephalus_glaber_male
ENSPLAG00000019842	-	100	79.140	ENSHCOG00000001071	-	100	79.310	Hippocampus_comes
ENSPLAG00000019842	-	100	82.241	ENSKMAG00000005540	-	100	82.030	Kryptolebias_marmoratus
ENSPLAG00000019842	-	100	59.099	ENSLACG00000015511	-	76	66.262	Latimeria_chalumnae
ENSPLAG00000019842	-	59	85.091	ENSMOCG00000020285	-	82	62.876	Microtus_ochrogaster
ENSPLAG00000019842	-	100	82.479	ENSMMOG00000011639	-	100	79.399	Mola_mola
ENSPLAG00000019842	-	66	78.387	ENSMODG00000002350	-	87	84.364	Monodelphis_domestica
ENSPLAG00000019842	-	100	87.179	ENSMALG00000019479	-	100	84.086	Monopterus_albus
ENSPLAG00000019842	-	100	87.957	ENSONIG00000010129	-	100	87.312	Oreochromis_niloticus
ENSPLAG00000019842	-	85	65.617	ENSOANG00000007343	-	92	62.069	Ornithorhynchus_anatinus
ENSPLAG00000019842	-	100	81.897	ENSORLG00000015621	-	95	97.561	Oryzias_latipes
ENSPLAG00000019842	-	100	82.112	ENSORLG00020016276	-	94	97.561	Oryzias_latipes_hni
ENSPLAG00000019842	-	100	81.897	ENSORLG00015016270	-	100	83.190	Oryzias_latipes_hsok
ENSPLAG00000019842	-	100	83.190	ENSOMEG00000022050	-	97	96.988	Oryzias_melastigma
ENSPLAG00000019842	-	59	85.766	ENSOGAG00000027048	-	80	64.474	Otolemur_garnettii
ENSPLAG00000019842	-	58	85.556	ENSOARG00000018899	-	83	62.907	Ovis_aries
ENSPLAG00000019842	-	100	66.802	ENSPKIG00000017291	-	84	65.885	Paramormyrops_kingsleyae
ENSPLAG00000019842	-	95	66.460	ENSPKIG00000004815	-	96	64.139	Paramormyrops_kingsleyae
ENSPLAG00000019842	-	100	99.784	ENSPFOG00000004025	-	100	99.784	Poecilia_formosa
ENSPLAG00000019842	-	100	99.568	ENSPMEG00000004807	-	97	99.568	Poecilia_mexicana
ENSPLAG00000019842	-	100	98.056	ENSPREG00000015599	-	100	98.056	Poecilia_reticulata
ENSPLAG00000019842	-	60	87.097	ENSPNAG00000017484	-	95	69.342	Pygocentrus_nattereri
ENSPLAG00000019842	-	59	85.401	ENSRNOG00000020438	Prpf38b	83	63.113	Rattus_norvegicus
ENSPLAG00000019842	-	94	68.539	ENSSFOG00015011251	-	85	89.024	Scleropages_formosus
ENSPLAG00000019842	-	100	84.829	ENSSLDG00000023487	-	100	84.402	Seriola_lalandi_dorsalis
ENSPLAG00000019842	-	99	78.879	ENSTRUG00000011765	-	100	78.017	Takifugu_rubripes
ENSPLAG00000019842	-	97	79.365	ENSTNIG00000015299	-	99	71.183	Tetraodon_nigroviridis
ENSPLAG00000019842	-	59	76.557	ENSTBEG00000007504	-	88	57.725	Tupaia_belangeri
ENSPLAG00000019842	-	59	85.766	ENSTTRG00000006479	-	85	61.715	Tursiops_truncatus
ENSPLAG00000019842	-	57	72.830	ENSVPAG00000005541	-	81	55.044	Vicugna_pacos
ENSPLAG00000019842	-	94	59.792	ENSXETG00000005260	prpf38b	88	61.915	Xenopus_tropicalis
ENSPLAG00000019842	-	100	98.272	ENSXCOG00000008329	-	100	98.272	Xiphophorus_couchianus
ENSPLAG00000019842	-	100	98.272	ENSXMAG00000023831	-	100	98.272	Xiphophorus_maculatus