EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000019878 (Gene tree)
Gene ID: 106945475
Gene Symbol: sept6 (1 of many)
Alias: -
Full Name: septin-6
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 18500 bases
Position: chrKQ545460.1:466271-484770
Accession: 106945475
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000015835	MMR_HSR1	PF01926.23	1.3e-07	1	1
ENSPLAP00000029538	MMR_HSR1	PF01926.23	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000024600	-	2507	XM_015029181	ENSPLAP00000029538	427 (aa)	XP_014884667	UPI0004441FFA
ENSPLAT00000024611	-	2467	XM_015029177	ENSPLAP00000015835	427 (aa)	XP_014884663	UPI0004441FFA

Gene Model

Click here to download ENSPLAG00000019878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019878's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000019878	sept6	52	98.655	ENSPLAG00000005147	sept6	93	98.655
ENSPLAG00000019878	sept6	76	40.653	ENSPLAG00000003540	sept2	89	40.419
ENSPLAG00000019878	sept6	79	40.282	ENSPLAG00000000023	SEPT4	95	40.252
ENSPLAG00000019878	sept6	74	40.248	ENSPLAG00000013644	-	86	42.466
ENSPLAG00000019878	sept6	67	43.051	ENSPLAG00000018547	sept5a	95	38.723
ENSPLAG00000019878	sept6	93	39.659	ENSPLAG00000017993	-	94	39.659
ENSPLAG00000019878	sept6	77	40.816	ENSPLAG00000018604	zgc:63587	97	40.588
ENSPLAG00000019878	sept6	71	40.764	ENSPLAG00000004719	sept12	90	40.575
ENSPLAG00000019878	sept6	99	67.299	ENSPLAG00000020037	sept8b	93	67.299
ENSPLAG00000019878	sept6	88	36.979	ENSPLAG00000010083	sept15	99	36.788
ENSPLAG00000019878	sept6	67	40.476	ENSPLAG00000005877	sept5b	90	38.690
ENSPLAG00000019878	sept6	81	36.538	ENSPLAG00000019026	sept4a	86	39.373
ENSPLAG00000019878	sept6	95	40.334	ENSPLAG00000013322	-	98	39.857
ENSPLAG00000019878	sept6	68	44.781	ENSPLAG00000010228	sept3	70	44.781
ENSPLAG00000019878	sept6	100	76.112	ENSPLAG00000001815	sept8a	100	76.112

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019878	sept6	100	90.398	ENSG00000125354	SEPT6	100	90.398	Homo_sapiens
ENSPLAG00000019878	sept6	100	99.063	ENSAPOG00000000347	sept6	100	99.063	Acanthochromis_polyacanthus
ENSPLAG00000019878	sept6	99	98.826	ENSACIG00000013682	sept6	99	98.826	Amphilophus_citrinellus
ENSPLAG00000019878	sept6	100	99.063	ENSAOCG00000011293	sept6	100	99.063	Amphiprion_ocellaris
ENSPLAG00000019878	sept6	100	99.063	ENSAPEG00000005460	sept6	100	99.063	Amphiprion_percula
ENSPLAG00000019878	sept6	100	98.595	ENSATEG00000018814	sept6	100	98.595	Anabas_testudineus
ENSPLAG00000019878	sept6	100	90.164	ENSANAG00000033580	SEPT6	100	90.164	Aotus_nancymaae
ENSPLAG00000019878	sept6	100	98.595	ENSACLG00000001734	sept6	100	98.595	Astatotilapia_calliptera
ENSPLAG00000019878	sept6	100	95.550	ENSAMXG00000033660	sept6	100	95.550	Astyanax_mexicanus
ENSPLAG00000019878	sept6	100	90.164	ENSCJAG00000005022	SEPT6	100	90.164	Callithrix_jacchus
ENSPLAG00000019878	sept6	100	83.607	ENSCCAG00000023266	SEPT6	99	83.607	Cebus_capucinus
ENSPLAG00000019878	sept6	100	90.398	ENSCATG00000036060	SEPT6	100	90.398	Cercocebus_atys
ENSPLAG00000019878	sept6	100	90.398	ENSCSAG00000018351	SEPT6	100	90.398	Chlorocebus_sabaeus
ENSPLAG00000019878	sept6	100	90.398	ENSCANG00000016430	SEPT6	100	90.398	Colobus_angolensis_palliatus
ENSPLAG00000019878	sept6	100	90.398	ENSCGRG00001014207	Sept6	100	90.398	Cricetulus_griseus_chok1gshd
ENSPLAG00000019878	sept6	99	89.786	ENSCGRG00000007825	Sept6	100	90.647	Cricetulus_griseus_crigri
ENSPLAG00000019878	sept6	100	97.658	ENSCSEG00000002026	sept6	94	97.658	Cynoglossus_semilaevis
ENSPLAG00000019878	sept6	100	99.532	ENSCVAG00000004959	sept6	100	99.532	Cyprinodon_variegatus
ENSPLAG00000019878	sept6	100	96.019	ENSDARG00000010721	sept6	99	96.019	Danio_rerio
ENSPLAG00000019878	sept6	100	96.487	ENSELUG00000020499	sept6	96	96.487	Esox_lucius
ENSPLAG00000019878	sept6	100	90.398	ENSFCAG00000008744	SEPT6	100	90.398	Felis_catus
ENSPLAG00000019878	sept6	100	90.164	ENSFDAG00000002473	SEPT6	100	90.164	Fukomys_damarensis
ENSPLAG00000019878	sept6	100	99.063	ENSFHEG00000017987	sept6	100	99.063	Fundulus_heteroclitus
ENSPLAG00000019878	sept6	100	96.487	ENSGMOG00000001671	sept6	98	96.487	Gadus_morhua
ENSPLAG00000019878	sept6	100	99.297	ENSGAFG00000000922	sept6	100	99.297	Gambusia_affinis
ENSPLAG00000019878	sept6	100	98.361	ENSGACG00000017441	sept6	99	98.361	Gasterosteus_aculeatus
ENSPLAG00000019878	sept6	100	90.398	ENSGGOG00000009733	SEPT6	100	90.398	Gorilla_gorilla
ENSPLAG00000019878	sept6	100	98.595	ENSHBUG00000017506	sept6	100	98.595	Haplochromis_burtoni
ENSPLAG00000019878	sept6	100	98.595	ENSHCOG00000017047	sept6	100	98.595	Hippocampus_comes
ENSPLAG00000019878	sept6	100	95.550	ENSIPUG00000019317	sept6	84	95.550	Ictalurus_punctatus
ENSPLAG00000019878	sept6	100	90.398	ENSJJAG00000020412	Sept6	100	90.398	Jaculus_jaculus
ENSPLAG00000019878	sept6	100	98.829	ENSKMAG00000020207	sept6	100	98.829	Kryptolebias_marmoratus
ENSPLAG00000019878	sept6	100	98.361	ENSLBEG00000028683	sept6	95	98.361	Labrus_bergylta
ENSPLAG00000019878	sept6	100	93.443	ENSLOCG00000015233	sept6	99	94.250	Lepisosteus_oculatus
ENSPLAG00000019878	sept6	100	90.398	ENSMFAG00000003084	SEPT6	100	90.398	Macaca_fascicularis
ENSPLAG00000019878	sept6	100	90.398	ENSMMUG00000017669	SEPT6	100	90.398	Macaca_mulatta
ENSPLAG00000019878	sept6	100	90.398	ENSMNEG00000026932	SEPT6	100	90.398	Macaca_nemestrina
ENSPLAG00000019878	sept6	100	90.398	ENSMLEG00000030428	SEPT6	100	90.398	Mandrillus_leucophaeus
ENSPLAG00000019878	sept6	100	98.126	ENSMAMG00000019988	sept6	100	98.126	Mastacembelus_armatus
ENSPLAG00000019878	sept6	100	98.595	ENSMZEG00005007935	sept6	89	98.595	Maylandia_zebra
ENSPLAG00000019878	sept6	100	90.632	ENSMAUG00000018038	Sept6	100	90.632	Mesocricetus_auratus
ENSPLAG00000019878	sept6	98	90.952	ENSMOCG00000000500	Sept6	99	91.106	Microtus_ochrogaster
ENSPLAG00000019878	sept6	97	98.068	ENSMMOG00000004176	sept6	97	98.068	Mola_mola
ENSPLAG00000019878	sept6	100	97.658	ENSMALG00000007921	sept6	100	97.658	Monopterus_albus
ENSPLAG00000019878	sept6	100	89.227	MGP_CAROLIEiJ_G0032996	Sept6	100	89.227	Mus_caroli
ENSPLAG00000019878	sept6	100	88.993	ENSMUSG00000050379	Sept6	100	88.993	Mus_musculus
ENSPLAG00000019878	sept6	62	88.593	MGP_PahariEiJ_G0031540	-	71	88.593	Mus_pahari
ENSPLAG00000019878	sept6	100	89.227	MGP_SPRETEiJ_G0034149	Sept6	100	89.227	Mus_spretus
ENSPLAG00000019878	sept6	97	89.183	ENSMLUG00000005623	SEPT6	95	89.183	Myotis_lucifugus
ENSPLAG00000019878	sept6	100	89.461	ENSNGAG00000010702	Sept6	100	89.461	Nannospalax_galili
ENSPLAG00000019878	sept6	99	91.080	ENSNBRG00000011675	sept6	99	91.080	Neolamprologus_brichardi
ENSPLAG00000019878	sept6	100	90.398	ENSNLEG00000014873	SEPT6	100	90.398	Nomascus_leucogenys
ENSPLAG00000019878	sept6	100	98.595	ENSONIG00000002528	sept6	99	98.595	Oreochromis_niloticus
ENSPLAG00000019878	sept6	100	98.361	ENSORLG00000000997	sept6	100	98.750	Oryzias_latipes
ENSPLAG00000019878	sept6	100	98.361	ENSORLG00020003886	sept6	100	98.361	Oryzias_latipes_hni
ENSPLAG00000019878	sept6	100	98.361	ENSORLG00015013025	sept6	100	98.361	Oryzias_latipes_hsok
ENSPLAG00000019878	sept6	100	96.956	ENSOMEG00000014650	sept6	100	96.956	Oryzias_melastigma
ENSPLAG00000019878	sept6	100	90.398	ENSPPAG00000040865	SEPT6	100	90.398	Pan_paniscus
ENSPLAG00000019878	sept6	100	90.398	ENSPPRG00000023588	SEPT6	100	90.398	Panthera_pardus
ENSPLAG00000019878	sept6	96	77.805	ENSPTIG00000015338	SEPT6	99	77.805	Panthera_tigris_altaica
ENSPLAG00000019878	sept6	100	90.164	ENSPTRG00000022227	SEPT6	100	90.164	Pan_troglodytes
ENSPLAG00000019878	sept6	100	90.398	ENSPANG00000000899	SEPT6	100	90.398	Papio_anubis
ENSPLAG00000019878	sept6	99	94.601	ENSPKIG00000013948	SEPT6	100	95.000	Paramormyrops_kingsleyae
ENSPLAG00000019878	sept6	100	88.525	ENSPKIG00000019114	sept6	100	88.525	Paramormyrops_kingsleyae
ENSPLAG00000019878	sept6	99	96.009	ENSPMGG00000012133	sept6	100	96.009	Periophthalmus_magnuspinnatus
ENSPLAG00000019878	sept6	100	90.398	ENSPEMG00000016450	Sept6	100	90.398	Peromyscus_maniculatus_bairdii
ENSPLAG00000019878	sept6	100	85.714	ENSPCIG00000028910	SEPT6	100	85.714	Phascolarctos_cinereus
ENSPLAG00000019878	sept6	98	99.761	ENSPFOG00000024721	sept6	96	99.761	Poecilia_formosa
ENSPLAG00000019878	sept6	100	100.000	ENSPMEG00000023470	sept6	100	100.000	Poecilia_mexicana
ENSPLAG00000019878	sept6	100	99.532	ENSPREG00000012310	sept6	100	99.532	Poecilia_reticulata
ENSPLAG00000019878	sept6	100	88.759	ENSPPYG00000020673	SEPT6	100	88.759	Pongo_abelii
ENSPLAG00000019878	sept6	100	98.595	ENSPNYG00000009709	sept6	100	99.000	Pundamilia_nyererei
ENSPLAG00000019878	sept6	100	96.019	ENSPNAG00000021638	sept6	99	96.019	Pygocentrus_nattereri
ENSPLAG00000019878	sept6	100	90.398	ENSRBIG00000044672	SEPT6	100	90.398	Rhinopithecus_bieti
ENSPLAG00000019878	sept6	100	90.398	ENSRROG00000038667	SEPT6	100	90.398	Rhinopithecus_roxellana
ENSPLAG00000019878	sept6	100	89.930	ENSSBOG00000024143	SEPT6	100	89.930	Saimiri_boliviensis_boliviensis
ENSPLAG00000019878	sept6	99	86.353	ENSSHAG00000007460	SEPT6	98	86.353	Sarcophilus_harrisii
ENSPLAG00000019878	sept6	100	92.037	ENSSFOG00015005477	sept6	100	92.037	Scleropages_formosus
ENSPLAG00000019878	sept6	100	94.614	ENSSFOG00015010832	SEPT6	99	94.712	Scleropages_formosus
ENSPLAG00000019878	sept6	100	98.126	ENSSMAG00000012785	sept6	100	98.126	Scophthalmus_maximus
ENSPLAG00000019878	sept6	100	99.063	ENSSDUG00000005575	sept6	100	99.063	Seriola_dumerili
ENSPLAG00000019878	sept6	100	99.063	ENSSLDG00000003277	sept6	100	99.063	Seriola_lalandi_dorsalis
ENSPLAG00000019878	sept6	100	99.063	ENSSPAG00000010108	sept6	100	99.063	Stegastes_partitus
ENSPLAG00000019878	sept6	100	96.956	ENSTRUG00000010830	sept6	100	96.956	Takifugu_rubripes
ENSPLAG00000019878	sept6	100	95.785	ENSTNIG00000015761	sept6	99	95.785	Tetraodon_nigroviridis
ENSPLAG00000019878	sept6	56	95.000	ENSXCOG00000016712	sept6	89	95.000	Xiphophorus_couchianus
ENSPLAG00000019878	sept6	100	99.532	ENSXMAG00000013699	sept6	100	99.532	Xiphophorus_maculatus