EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000019895 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 408-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 11648 bases
Position: chrKQ546552.1:11202-22849
Accession: 106960857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000029560	zf-C2H2	PF00096.26	2.1e-21	1	4
ENSPLAP00000029560	zf-C2H2	PF00096.26	2.1e-21	2	4
ENSPLAP00000029560	zf-C2H2	PF00096.26	2.1e-21	3	4
ENSPLAP00000029560	zf-C2H2	PF00096.26	2.1e-21	4	4
ENSPLAP00000029563	zf-C2H2	PF00096.26	2.1e-21	1	4
ENSPLAP00000029563	zf-C2H2	PF00096.26	2.1e-21	2	4
ENSPLAP00000029563	zf-C2H2	PF00096.26	2.1e-21	3	4
ENSPLAP00000029563	zf-C2H2	PF00096.26	2.1e-21	4	4
ENSPLAP00000029560	zf-met	PF12874.7	0.00017	1	1
ENSPLAP00000029563	zf-met	PF12874.7	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000024655	-	1521	XM_015054213	ENSPLAP00000029563	462 (aa)	XP_014909699	-
ENSPLAT00000024660	-	1719	-	ENSPLAP00000029560	462 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000019895's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019895's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000019895	-	52	39.024	ENSPLAG00000015517	-	61	39.024
ENSPLAG00000019895	-	63	39.634	ENSPLAG00000018436	-	99	39.506
ENSPLAG00000019895	-	51	42.727	ENSPLAG00000006223	-	74	42.727
ENSPLAG00000019895	-	66	41.509	ENSPLAG00000021074	-	98	41.509
ENSPLAG00000019895	-	70	39.394	ENSPLAG00000009535	-	88	39.394
ENSPLAG00000019895	-	84	40.361	ENSPLAG00000017005	-	94	40.361
ENSPLAG00000019895	-	98	35.404	ENSPLAG00000014148	prdm5	99	35.404
ENSPLAG00000019895	-	51	35.780	ENSPLAG00000009346	znf236	67	35.780
ENSPLAG00000019895	-	74	39.752	ENSPLAG00000004448	-	95	39.752
ENSPLAG00000019895	-	64	42.767	ENSPLAG00000014105	-	100	42.767
ENSPLAG00000019895	-	57	41.964	ENSPLAG00000004735	-	92	42.169
ENSPLAG00000019895	-	68	37.273	ENSPLAG00000008691	-	92	40.625
ENSPLAG00000019895	-	51	46.957	ENSPLAG00000019775	-	97	46.957
ENSPLAG00000019895	-	52	43.750	ENSPLAG00000001315	znf668	88	43.750
ENSPLAG00000019895	-	51	35.088	ENSPLAG00000010715	wt1a	52	35.088
ENSPLAG00000019895	-	54	33.684	ENSPLAG00000023509	-	89	36.893
ENSPLAG00000019895	-	65	43.662	ENSPLAG00000004290	-	95	43.662
ENSPLAG00000019895	-	71	38.182	ENSPLAG00000010211	-	93	42.073

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019895	-	97	47.619	ENSG00000175213	ZNF408	81	47.619	Homo_sapiens
ENSPLAG00000019895	-	98	37.975	ENSAMXG00000032642	znf408	79	41.593	Astyanax_mexicanus
ENSPLAG00000019895	-	99	45.455	ENSCJAG00000019859	ZNF408	82	46.032	Callithrix_jacchus
ENSPLAG00000019895	-	99	44.545	ENSTSYG00000025443	ZNF408	82	44.545	Carlito_syrichta
ENSPLAG00000019895	-	99	47.273	ENSCCAG00000029472	ZNF408	82	47.619	Cebus_capucinus
ENSPLAG00000019895	-	97	41.818	ENSCGRG00001023588	Zfp408	80	41.818	Cricetulus_griseus_chok1gshd
ENSPLAG00000019895	-	97	41.818	ENSCGRG00000017618	Zfp408	80	41.818	Cricetulus_griseus_crigri
ENSPLAG00000019895	-	99	43.636	ENSDNOG00000047669	ZNF408	83	43.636	Dasypus_novemcinctus
ENSPLAG00000019895	-	99	44.248	ENSDORG00000000387	Zfp408	82	44.248	Dipodomys_ordii
ENSPLAG00000019895	-	100	67.530	ENSFHEG00000016754	-	79	67.729	Fundulus_heteroclitus
ENSPLAG00000019895	-	100	89.633	ENSGAFG00000018557	-	80	89.633	Gambusia_affinis
ENSPLAG00000019895	-	97	47.619	ENSGGOG00000010152	ZNF408	81	47.619	Gorilla_gorilla
ENSPLAG00000019895	-	99	44.545	ENSMICG00000045320	ZNF408	82	44.643	Microcebus_murinus
ENSPLAG00000019895	-	99	43.636	ENSNGAG00000000309	Zfp408	83	43.363	Nannospalax_galili
ENSPLAG00000019895	-	99	47.619	ENSNLEG00000014132	ZNF408	82	47.619	Nomascus_leucogenys
ENSPLAG00000019895	-	99	44.545	ENSOCUG00000010953	ZNF408	84	44.545	Oryctolagus_cuniculus
ENSPLAG00000019895	-	97	47.619	ENSPPAG00000034993	ZNF408	81	47.619	Pan_paniscus
ENSPLAG00000019895	-	70	44.545	ENSPPRG00000016866	ZNF408	82	44.545	Panthera_pardus
ENSPLAG00000019895	-	97	47.619	ENSPTRG00000003551	ZNF408	81	47.619	Pan_troglodytes
ENSPLAG00000019895	-	100	99.784	ENSPFOG00000001760	-	81	99.784	Poecilia_formosa
ENSPLAG00000019895	-	66	97.039	ENSPMEG00000021147	-	80	97.039	Poecilia_mexicana
ENSPLAG00000019895	-	100	95.032	ENSPREG00000017068	-	81	95.032	Poecilia_reticulata
ENSPLAG00000019895	-	99	47.619	ENSPPYG00000003318	ZNF408	82	47.619	Pongo_abelii
ENSPLAG00000019895	-	99	43.636	ENSPCAG00000014001	ZNF408	83	43.636	Procavia_capensis
ENSPLAG00000019895	-	99	44.545	ENSPCOG00000028698	ZNF408	82	44.545	Propithecus_coquereli
ENSPLAG00000019895	-	97	42.727	ENSPVAG00000015791	ZNF408	80	42.727	Pteropus_vampyrus
ENSPLAG00000019895	-	99	47.273	ENSSBOG00000033023	ZNF408	82	47.619	Saimiri_boliviensis_boliviensis
ENSPLAG00000019895	-	68	89.474	ENSXCOG00000002869	-	83	89.474	Xiphophorus_couchianus
ENSPLAG00000019895	-	68	92.149	ENSXMAG00000018347	-	87	92.149	Xiphophorus_maculatus