EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000019926 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 7568 bases
Position: chrKQ546156.1:499116-506683
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000015894	MMR_HSR1	PF01926.23	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000030852	-	840	-	ENSPLAP00000015894	279 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000019926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000019926's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000019926	-	55	30.488	ENSPLAG00000019026	sept4a	60	32.479

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000019926	-	85	59.751	ENSAPOG00000006213	-	81	59.751	Acanthochromis_polyacanthus
ENSPLAG00000019926	-	85	66.390	ENSACIG00000023712	-	58	66.390	Amphilophus_citrinellus
ENSPLAG00000019926	-	72	63.366	ENSACIG00000014950	-	84	63.366	Amphilophus_citrinellus
ENSPLAG00000019926	-	70	43.147	ENSATEG00000008595	-	69	43.147	Anabas_testudineus
ENSPLAG00000019926	-	85	66.102	ENSACLG00000015361	-	58	66.102	Astatotilapia_calliptera
ENSPLAG00000019926	-	73	48.276	ENSACLG00000023033	-	51	48.276	Astatotilapia_calliptera
ENSPLAG00000019926	-	80	52.889	ENSAMXG00000030535	-	60	51.163	Astyanax_mexicanus
ENSPLAG00000019926	-	81	80.617	ENSCVAG00000022669	-	79	80.617	Cyprinodon_variegatus
ENSPLAG00000019926	-	79	78.829	ENSCVAG00000022676	-	65	78.829	Cyprinodon_variegatus
ENSPLAG00000019926	-	73	72.330	ENSCVAG00000014791	-	55	72.330	Cyprinodon_variegatus
ENSPLAG00000019926	-	81	64.865	ENSCVAG00000007794	-	50	64.865	Cyprinodon_variegatus
ENSPLAG00000019926	-	89	44.922	ENSDARG00000100858	zgc:171695	60	44.922	Danio_rerio
ENSPLAG00000019926	-	87	50.000	ENSDARG00000039888	CR855393.1	68	50.000	Danio_rerio
ENSPLAG00000019926	-	82	51.064	ENSDARG00000076398	si:dkey-201l21.4	57	51.064	Danio_rerio
ENSPLAG00000019926	-	83	57.083	ENSELUG00000022148	-	54	57.083	Esox_lucius
ENSPLAG00000019926	-	74	49.275	ENSELUG00000008413	-	50	49.761	Esox_lucius
ENSPLAG00000019926	-	82	56.897	ENSFHEG00000002160	-	72	56.897	Fundulus_heteroclitus
ENSPLAG00000019926	-	58	46.626	ENSGMOG00000020059	-	78	46.626	Gadus_morhua
ENSPLAG00000019926	-	58	42.945	ENSGMOG00000019786	-	79	42.945	Gadus_morhua
ENSPLAG00000019926	-	50	42.958	ENSGMOG00000020208	-	76	42.958	Gadus_morhua
ENSPLAG00000019926	-	80	40.625	ENSGMOG00000008232	-	64	40.090	Gadus_morhua
ENSPLAG00000019926	-	82	41.126	ENSGAFG00000018470	-	88	41.126	Gambusia_affinis
ENSPLAG00000019926	-	84	58.723	ENSGAFG00000005050	-	89	58.723	Gambusia_affinis
ENSPLAG00000019926	-	81	66.372	ENSGACG00000005035	-	56	66.372	Gasterosteus_aculeatus
ENSPLAG00000019926	-	81	64.602	ENSGACG00000015437	-	56	64.602	Gasterosteus_aculeatus
ENSPLAG00000019926	-	57	48.750	ENSGACG00000015787	-	72	48.750	Gasterosteus_aculeatus
ENSPLAG00000019926	-	83	66.667	ENSHBUG00000007413	-	91	66.667	Haplochromis_burtoni
ENSPLAG00000019926	-	79	65.455	ENSHBUG00000023729	-	56	65.455	Haplochromis_burtoni
ENSPLAG00000019926	-	80	46.460	ENSIPUG00000013512	-	54	46.460	Ictalurus_punctatus
ENSPLAG00000019926	-	73	44.828	ENSIPUG00000000082	-	84	44.828	Ictalurus_punctatus
ENSPLAG00000019926	-	82	50.216	ENSIPUG00000009201	-	90	50.216	Ictalurus_punctatus
ENSPLAG00000019926	-	81	44.298	ENSLBEG00000012781	-	85	44.298	Labrus_bergylta
ENSPLAG00000019926	-	70	45.876	ENSLBEG00000028432	-	72	45.876	Labrus_bergylta
ENSPLAG00000019926	-	80	58.108	ENSLBEG00000019795	-	91	58.108	Labrus_bergylta
ENSPLAG00000019926	-	84	39.916	ENSLOCG00000017620	-	66	39.916	Lepisosteus_oculatus
ENSPLAG00000019926	-	76	42.478	ENSMAMG00000015204	-	89	42.478	Mastacembelus_armatus
ENSPLAG00000019926	-	80	68.750	ENSMZEG00005004397	-	76	69.196	Maylandia_zebra
ENSPLAG00000019926	-	75	70.000	ENSMZEG00005023315	-	52	70.000	Maylandia_zebra
ENSPLAG00000019926	-	79	64.545	ENSMZEG00005023309	-	56	64.545	Maylandia_zebra
ENSPLAG00000019926	-	86	60.417	ENSMZEG00005028531	-	52	60.417	Maylandia_zebra
ENSPLAG00000019926	-	87	62.745	ENSMMOG00000015162	-	98	62.745	Mola_mola
ENSPLAG00000019926	-	84	64.681	ENSMMOG00000011295	-	83	64.681	Mola_mola
ENSPLAG00000019926	-	81	68.000	ENSNBRG00000006565	-	71	68.000	Neolamprologus_brichardi
ENSPLAG00000019926	-	87	60.331	ENSONIG00000013895	-	92	60.331	Oreochromis_niloticus
ENSPLAG00000019926	-	80	58.559	ENSONIG00000013617	-	52	58.559	Oreochromis_niloticus
ENSPLAG00000019926	-	80	68.468	ENSONIG00000017927	-	65	68.468	Oreochromis_niloticus
ENSPLAG00000019926	-	80	54.978	ENSPMGG00000020583	-	54	54.978	Periophthalmus_magnuspinnatus
ENSPLAG00000019926	-	72	48.529	ENSPMGG00000008676	-	55	48.529	Periophthalmus_magnuspinnatus
ENSPLAG00000019926	-	81	54.310	ENSPMGG00000002690	-	63	54.310	Periophthalmus_magnuspinnatus
ENSPLAG00000019926	-	81	52.586	ENSPMGG00000016798	-	56	52.586	Periophthalmus_magnuspinnatus
ENSPLAG00000019926	-	82	37.229	ENSPMGG00000016292	-	54	37.229	Periophthalmus_magnuspinnatus
ENSPLAG00000019926	-	90	71.937	ENSPREG00000007255	-	57	71.937	Poecilia_reticulata
ENSPLAG00000019926	-	86	44.033	ENSPNYG00000016575	-	81	44.033	Pundamilia_nyererei
ENSPLAG00000019926	-	72	38.000	ENSPNAG00000011130	-	65	38.000	Pygocentrus_nattereri
ENSPLAG00000019926	-	79	43.891	ENSSDUG00000000370	-	85	43.891	Seriola_dumerili
ENSPLAG00000019926	-	73	69.608	ENSSDUG00000021349	-	87	69.608	Seriola_dumerili
ENSPLAG00000019926	-	80	43.750	ENSSDUG00000000316	-	91	43.750	Seriola_dumerili
ENSPLAG00000019926	-	87	38.618	ENSSDUG00000005919	-	84	38.618	Seriola_dumerili
ENSPLAG00000019926	-	84	67.660	ENSSLDG00000018054	-	95	67.660	Seriola_lalandi_dorsalis
ENSPLAG00000019926	-	78	43.182	ENSSLDG00000017661	-	94	43.182	Seriola_lalandi_dorsalis
ENSPLAG00000019926	-	82	60.262	ENSSPAG00000015996	-	85	60.262	Stegastes_partitus
ENSPLAG00000019926	-	81	42.795	ENSSPAG00000003300	-	89	42.795	Stegastes_partitus
ENSPLAG00000019926	-	88	66.000	ENSSPAG00000000948	-	50	66.000	Stegastes_partitus
ENSPLAG00000019926	-	80	59.009	ENSTRUG00000017314	-	98	56.596	Takifugu_rubripes
ENSPLAG00000019926	-	82	67.249	ENSTRUG00000001460	-	69	67.249	Takifugu_rubripes
ENSPLAG00000019926	-	80	59.459	ENSTRUG00000021059	-	81	59.459	Takifugu_rubripes
ENSPLAG00000019926	-	79	60.909	ENSTNIG00000003332	-	55	60.909	Tetraodon_nigroviridis
ENSPLAG00000019926	-	81	60.000	ENSTNIG00000005878	-	58	60.000	Tetraodon_nigroviridis
ENSPLAG00000019926	-	81	65.333	ENSTNIG00000006523	-	56	65.333	Tetraodon_nigroviridis
ENSPLAG00000019926	-	80	68.304	ENSXCOG00000001022	-	55	67.841	Xiphophorus_couchianus