EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000020460 (Gene tree)
Gene ID: 106947505
Gene Symbol: sf3b6
Alias: -
Full Name: splicing factor 3b subunit 6
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3708 bases
Position: chrKQ545559.1:135185-138892
Accession: 106947505
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000029870	RRM_1	PF00076.22	6.5e-16	1	1
ENSPLAP00000016332	RRM_1	PF00076.22	3.7e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000025245	-	882	XM_015032536	ENSPLAP00000029870	125 (aa)	XP_014888022	UPI000029C017
ENSPLAT00000025252	-	378	-	ENSPLAP00000016332	125 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000020460's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000020460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000020460	sf3b6	59	32.051	ENSPLAG00000005377	snrpb2	52	30.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000020460	sf3b6	100	98.400	ENSG00000115128	SF3B6	100	98.400	Homo_sapiens
ENSPLAG00000020460	sf3b6	100	100.000	ENSAPOG00000023788	sf3b6	100	100.000	Acanthochromis_polyacanthus
ENSPLAG00000020460	sf3b6	100	98.400	ENSAMEG00000002786	SF3B6	100	98.400	Ailuropoda_melanoleuca
ENSPLAG00000020460	sf3b6	100	100.000	ENSACIG00000012608	sf3b6	100	100.000	Amphilophus_citrinellus
ENSPLAG00000020460	sf3b6	100	100.000	ENSAOCG00000013394	sf3b6	100	100.000	Amphiprion_ocellaris
ENSPLAG00000020460	sf3b6	100	100.000	ENSAPEG00000015311	sf3b6	100	100.000	Amphiprion_percula
ENSPLAG00000020460	sf3b6	100	100.000	ENSATEG00000016569	sf3b6	100	100.000	Anabas_testudineus
ENSPLAG00000020460	sf3b6	100	98.400	ENSACAG00000011677	SF3B6	100	98.400	Anolis_carolinensis
ENSPLAG00000020460	sf3b6	100	98.400	ENSANAG00000027284	SF3B6	95	98.400	Aotus_nancymaae
ENSPLAG00000020460	sf3b6	100	100.000	ENSACLG00000007793	sf3b6	100	100.000	Astatotilapia_calliptera
ENSPLAG00000020460	sf3b6	100	98.400	ENSAMXG00000034888	sf3b6	100	98.400	Astyanax_mexicanus
ENSPLAG00000020460	sf3b6	100	98.400	ENSBTAG00000003407	SF3B6	100	98.400	Bos_taurus
ENSPLAG00000020460	sf3b6	100	96.800	ENSBTAG00000049128	-	100	96.800	Bos_taurus
ENSPLAG00000020460	sf3b6	100	66.400	WBGene00016808	C50D2.5	91	66.400	Caenorhabditis_elegans
ENSPLAG00000020460	sf3b6	100	98.400	ENSCJAG00000007716	SF3B6	100	98.400	Callithrix_jacchus
ENSPLAG00000020460	sf3b6	100	98.400	ENSCAFG00000003957	SF3B6	100	98.400	Canis_familiaris
ENSPLAG00000020460	sf3b6	100	98.400	ENSCAFG00020025576	SF3B6	100	98.400	Canis_lupus_dingo
ENSPLAG00000020460	sf3b6	100	98.400	ENSCHIG00000009902	SF3B6	100	98.400	Capra_hircus
ENSPLAG00000020460	sf3b6	100	98.400	ENSTSYG00000013978	SF3B6	100	98.400	Carlito_syrichta
ENSPLAG00000020460	sf3b6	97	95.041	ENSCAPG00000016302	SF3B6	99	95.041	Cavia_aperea
ENSPLAG00000020460	sf3b6	100	98.400	ENSCPOG00000008016	SF3B6	100	98.400	Cavia_porcellus
ENSPLAG00000020460	sf3b6	99	92.742	ENSCCAG00000018894	-	96	92.742	Cebus_capucinus
ENSPLAG00000020460	sf3b6	100	98.400	ENSCCAG00000036653	SF3B6	100	98.400	Cebus_capucinus
ENSPLAG00000020460	sf3b6	100	98.400	ENSCATG00000030936	SF3B6	100	98.400	Cercocebus_atys
ENSPLAG00000020460	sf3b6	100	98.400	ENSCLAG00000014512	SF3B6	100	98.400	Chinchilla_lanigera
ENSPLAG00000020460	sf3b6	100	98.400	ENSCSAG00000008390	SF3B6	100	98.400	Chlorocebus_sabaeus
ENSPLAG00000020460	sf3b6	99	72.581	ENSCHOG00000013886	-	99	72.581	Choloepus_hoffmanni
ENSPLAG00000020460	sf3b6	100	98.400	ENSCHOG00000000689	SF3B6	100	98.400	Choloepus_hoffmanni
ENSPLAG00000020460	sf3b6	100	98.400	ENSCPBG00000020042	SF3B6	100	98.400	Chrysemys_picta_bellii
ENSPLAG00000020460	sf3b6	98	81.301	ENSCING00000012689	-	97	81.301	Ciona_intestinalis
ENSPLAG00000020460	sf3b6	100	98.400	ENSCANG00000030559	SF3B6	100	98.400	Colobus_angolensis_palliatus
ENSPLAG00000020460	sf3b6	100	98.400	ENSCGRG00001014595	Sf3b6	100	98.400	Cricetulus_griseus_chok1gshd
ENSPLAG00000020460	sf3b6	100	98.400	ENSCGRG00000005272	Sf3b6	100	98.400	Cricetulus_griseus_crigri
ENSPLAG00000020460	sf3b6	100	99.200	ENSCSEG00000019017	sf3b6	100	99.200	Cynoglossus_semilaevis
ENSPLAG00000020460	sf3b6	100	99.200	ENSCVAG00000005055	sf3b6	100	99.200	Cyprinodon_variegatus
ENSPLAG00000020460	sf3b6	100	98.400	ENSDARG00000009753	sf3b6	100	98.400	Danio_rerio
ENSPLAG00000020460	sf3b6	100	98.400	ENSDNOG00000007148	SF3B6	100	98.400	Dasypus_novemcinctus
ENSPLAG00000020460	sf3b6	99	80.952	ENSDORG00000027390	-	98	80.952	Dipodomys_ordii
ENSPLAG00000020460	sf3b6	99	80.952	ENSDORG00000029761	-	98	80.952	Dipodomys_ordii
ENSPLAG00000020460	sf3b6	100	98.400	ENSDORG00000009772	Sf3b6	100	98.400	Dipodomys_ordii
ENSPLAG00000020460	sf3b6	92	77.391	FBgn0035692	Sf3b6	95	77.391	Drosophila_melanogaster
ENSPLAG00000020460	sf3b6	92	92.174	ENSEBUG00000004424	sf3b6	91	92.174	Eptatretus_burgeri
ENSPLAG00000020460	sf3b6	100	87.200	ENSEASG00005008061	-	100	87.200	Equus_asinus_asinus
ENSPLAG00000020460	sf3b6	100	98.400	ENSEASG00005009993	SF3B6	100	98.400	Equus_asinus_asinus
ENSPLAG00000020460	sf3b6	79	84.848	ENSECAG00000027755	-	92	81.481	Equus_caballus
ENSPLAG00000020460	sf3b6	81	94.059	ENSECAG00000015618	SF3B6	99	90.741	Equus_caballus
ENSPLAG00000020460	sf3b6	100	98.400	ENSELUG00000010379	sf3b6	100	98.400	Esox_lucius
ENSPLAG00000020460	sf3b6	100	98.400	ENSFCAG00000031365	SF3B6	100	98.400	Felis_catus
ENSPLAG00000020460	sf3b6	100	98.400	ENSFALG00000001651	SF3B6	100	98.400	Ficedula_albicollis
ENSPLAG00000020460	sf3b6	100	98.400	ENSFDAG00000007864	SF3B6	100	98.400	Fukomys_damarensis
ENSPLAG00000020460	sf3b6	100	99.200	ENSFHEG00000000685	sf3b6	100	99.200	Fundulus_heteroclitus
ENSPLAG00000020460	sf3b6	100	97.600	ENSGMOG00000005123	sf3b6	100	97.600	Gadus_morhua
ENSPLAG00000020460	sf3b6	73	98.901	ENSGALG00000016501	SF3B6	100	98.901	Gallus_gallus
ENSPLAG00000020460	sf3b6	100	100.000	ENSGAFG00000009334	sf3b6	100	100.000	Gambusia_affinis
ENSPLAG00000020460	sf3b6	100	99.200	ENSGACG00000004803	sf3b6	100	99.200	Gasterosteus_aculeatus
ENSPLAG00000020460	sf3b6	100	98.400	ENSGAGG00000012240	SF3B6	100	98.400	Gopherus_agassizii
ENSPLAG00000020460	sf3b6	100	98.400	ENSGGOG00000040806	SF3B6	100	98.400	Gorilla_gorilla
ENSPLAG00000020460	sf3b6	100	100.000	ENSHBUG00000012556	sf3b6	100	100.000	Haplochromis_burtoni
ENSPLAG00000020460	sf3b6	100	98.400	ENSHGLG00000014895	SF3B14	100	98.400	Heterocephalus_glaber_female
ENSPLAG00000020460	sf3b6	100	98.400	ENSHGLG00100008639	SF3B14	100	98.400	Heterocephalus_glaber_male
ENSPLAG00000020460	sf3b6	100	99.200	ENSHCOG00000019962	sf3b6	100	99.200	Hippocampus_comes
ENSPLAG00000020460	sf3b6	100	98.400	ENSIPUG00000023800	sf3b6	100	98.400	Ictalurus_punctatus
ENSPLAG00000020460	sf3b6	100	98.400	ENSJJAG00000021819	Sf3b6	100	98.400	Jaculus_jaculus
ENSPLAG00000020460	sf3b6	100	100.000	ENSKMAG00000004000	sf3b6	100	100.000	Kryptolebias_marmoratus
ENSPLAG00000020460	sf3b6	100	98.400	ENSLBEG00000022937	sf3b6	100	98.400	Labrus_bergylta
ENSPLAG00000020460	sf3b6	100	98.400	ENSLACG00000014326	SF3B6	100	98.400	Latimeria_chalumnae
ENSPLAG00000020460	sf3b6	100	98.400	ENSLOCG00000016481	sf3b6	100	98.400	Lepisosteus_oculatus
ENSPLAG00000020460	sf3b6	100	98.400	ENSLAFG00000029423	SF3B6	100	98.400	Loxodonta_africana
ENSPLAG00000020460	sf3b6	100	98.400	ENSMFAG00000038178	SF3B6	100	98.400	Macaca_fascicularis
ENSPLAG00000020460	sf3b6	100	98.400	ENSMMUG00000001282	SF3B6	100	98.400	Macaca_mulatta
ENSPLAG00000020460	sf3b6	100	98.400	ENSMNEG00000029050	SF3B6	100	98.400	Macaca_nemestrina
ENSPLAG00000020460	sf3b6	100	98.400	ENSMLEG00000019896	SF3B6	100	98.400	Mandrillus_leucophaeus
ENSPLAG00000020460	sf3b6	77	100.000	ENSMAMG00000007713	sf3b6	87	100.000	Mastacembelus_armatus
ENSPLAG00000020460	sf3b6	100	100.000	ENSMZEG00005003557	sf3b6	100	100.000	Maylandia_zebra
ENSPLAG00000020460	sf3b6	100	98.400	ENSMGAG00000014057	SF3B6	100	98.400	Meleagris_gallopavo
ENSPLAG00000020460	sf3b6	100	98.400	ENSMAUG00000000586	-	100	98.400	Mesocricetus_auratus
ENSPLAG00000020460	sf3b6	100	98.400	ENSMICG00000032874	SF3B6	100	98.400	Microcebus_murinus
ENSPLAG00000020460	sf3b6	100	98.400	ENSMOCG00000014338	Sf3b6	100	98.400	Microtus_ochrogaster
ENSPLAG00000020460	sf3b6	100	99.200	ENSMMOG00000015653	sf3b6	100	99.200	Mola_mola
ENSPLAG00000020460	sf3b6	100	91.200	ENSMODG00000002144	SF3B6	100	91.200	Monodelphis_domestica
ENSPLAG00000020460	sf3b6	100	99.200	ENSMALG00000019642	sf3b6	67	99.200	Monopterus_albus
ENSPLAG00000020460	sf3b6	100	98.400	MGP_CAROLIEiJ_G0017590	Sf3b6	100	98.400	Mus_caroli
ENSPLAG00000020460	sf3b6	100	98.400	ENSMUSG00000037361	Sf3b6	100	98.400	Mus_musculus
ENSPLAG00000020460	sf3b6	100	98.400	MGP_PahariEiJ_G0029348	Sf3b6	100	98.400	Mus_pahari
ENSPLAG00000020460	sf3b6	100	98.400	MGP_SPRETEiJ_G0018434	Sf3b6	100	98.400	Mus_spretus
ENSPLAG00000020460	sf3b6	100	98.400	ENSMPUG00000013957	SF3B6	100	98.400	Mustela_putorius_furo
ENSPLAG00000020460	sf3b6	100	96.800	ENSMLUG00000002473	SF3B6	100	96.800	Myotis_lucifugus
ENSPLAG00000020460	sf3b6	100	98.400	ENSNGAG00000020256	Sf3b6	100	98.400	Nannospalax_galili
ENSPLAG00000020460	sf3b6	100	100.000	ENSNBRG00000018244	sf3b6	100	100.000	Neolamprologus_brichardi
ENSPLAG00000020460	sf3b6	100	98.400	ENSNLEG00000000815	-	100	98.400	Nomascus_leucogenys
ENSPLAG00000020460	sf3b6	87	98.165	ENSODEG00000009547	SF3B6	92	98.165	Octodon_degus
ENSPLAG00000020460	sf3b6	100	100.000	ENSONIG00000001219	sf3b6	100	100.000	Oreochromis_niloticus
ENSPLAG00000020460	sf3b6	100	98.400	ENSOANG00000007627	SF3B6	100	98.400	Ornithorhynchus_anatinus
ENSPLAG00000020460	sf3b6	100	98.400	ENSOCUG00000022008	SF3B6	100	98.400	Oryctolagus_cuniculus
ENSPLAG00000020460	sf3b6	100	98.400	ENSORLG00000015955	sf3b6	100	98.400	Oryzias_latipes
ENSPLAG00000020460	sf3b6	100	98.400	ENSORLG00020005875	sf3b6	100	98.400	Oryzias_latipes_hni
ENSPLAG00000020460	sf3b6	100	98.400	ENSORLG00015001347	sf3b6	100	98.400	Oryzias_latipes_hsok
ENSPLAG00000020460	sf3b6	100	98.400	ENSOMEG00000014506	sf3b6	100	98.400	Oryzias_melastigma
ENSPLAG00000020460	sf3b6	100	98.400	ENSOGAG00000004468	SF3B6	100	98.400	Otolemur_garnettii
ENSPLAG00000020460	sf3b6	100	98.400	ENSOARG00000017819	SF3B6	100	98.400	Ovis_aries
ENSPLAG00000020460	sf3b6	100	98.400	ENSPPAG00000027816	SF3B6	100	98.400	Pan_paniscus
ENSPLAG00000020460	sf3b6	100	98.400	ENSPPRG00000023257	SF3B6	100	98.400	Panthera_pardus
ENSPLAG00000020460	sf3b6	100	98.400	ENSPTIG00000013322	SF3B6	100	98.400	Panthera_tigris_altaica
ENSPLAG00000020460	sf3b6	100	98.400	ENSPTRG00000011709	SF3B6	100	98.400	Pan_troglodytes
ENSPLAG00000020460	sf3b6	100	98.400	ENSPANG00000021963	SF3B6	100	98.400	Papio_anubis
ENSPLAG00000020460	sf3b6	100	98.400	ENSPKIG00000012311	sf3b6	100	98.400	Paramormyrops_kingsleyae
ENSPLAG00000020460	sf3b6	92	98.261	ENSPSIG00000017115	SF3B6	100	98.261	Pelodiscus_sinensis
ENSPLAG00000020460	sf3b6	77	97.917	ENSPMGG00000014621	sf3b6	80	97.917	Periophthalmus_magnuspinnatus
ENSPLAG00000020460	sf3b6	100	98.400	ENSPEMG00000010308	Sf3b6	100	98.400	Peromyscus_maniculatus_bairdii
ENSPLAG00000020460	sf3b6	94	88.136	ENSPMAG00000006008	sf3b6	94	88.136	Petromyzon_marinus
ENSPLAG00000020460	sf3b6	100	98.400	ENSPCIG00000022128	-	100	98.400	Phascolarctos_cinereus
ENSPLAG00000020460	sf3b6	99	76.613	ENSPCIG00000015858	-	99	76.613	Phascolarctos_cinereus
ENSPLAG00000020460	sf3b6	100	100.000	ENSPFOG00000012494	sf3b6	100	100.000	Poecilia_formosa
ENSPLAG00000020460	sf3b6	100	100.000	ENSPMEG00000004426	sf3b6	100	100.000	Poecilia_mexicana
ENSPLAG00000020460	sf3b6	100	98.400	ENSPPYG00000012603	SF3B6	100	98.400	Pongo_abelii
ENSPLAG00000020460	sf3b6	100	98.400	ENSPVAG00000011346	SF3B6	100	98.400	Pteropus_vampyrus
ENSPLAG00000020460	sf3b6	100	100.000	ENSPNYG00000021832	sf3b6	100	100.000	Pundamilia_nyererei
ENSPLAG00000020460	sf3b6	100	98.400	ENSPNAG00000008845	sf3b6	100	98.400	Pygocentrus_nattereri
ENSPLAG00000020460	sf3b6	100	83.200	ENSRNOG00000046172	Sf3b6	100	83.200	Rattus_norvegicus
ENSPLAG00000020460	sf3b6	100	98.400	ENSRBIG00000039598	SF3B6	100	98.400	Rhinopithecus_bieti
ENSPLAG00000020460	sf3b6	100	98.400	ENSRROG00000011368	SF3B6	100	98.400	Rhinopithecus_roxellana
ENSPLAG00000020460	sf3b6	100	98.400	ENSSBOG00000002914	SF3B6	100	98.400	Saimiri_boliviensis_boliviensis
ENSPLAG00000020460	sf3b6	100	98.400	ENSSFOG00015014370	sf3b6	100	98.400	Scleropages_formosus
ENSPLAG00000020460	sf3b6	100	98.400	ENSSMAG00000004566	sf3b6	100	98.400	Scophthalmus_maximus
ENSPLAG00000020460	sf3b6	100	100.000	ENSSDUG00000006538	sf3b6	100	100.000	Seriola_dumerili
ENSPLAG00000020460	sf3b6	100	100.000	ENSSLDG00000004494	sf3b6	100	100.000	Seriola_lalandi_dorsalis
ENSPLAG00000020460	sf3b6	100	98.400	ENSSARG00000011902	-	100	98.400	Sorex_araneus
ENSPLAG00000020460	sf3b6	100	98.400	ENSSPUG00000014919	SF3B6	100	98.400	Sphenodon_punctatus
ENSPLAG00000020460	sf3b6	100	100.000	ENSSPAG00000013201	sf3b6	100	100.000	Stegastes_partitus
ENSPLAG00000020460	sf3b6	100	98.400	ENSSSCG00000008587	SF3B6	100	98.400	Sus_scrofa
ENSPLAG00000020460	sf3b6	100	98.400	ENSTGUG00000013191	SF3B6	100	98.400	Taeniopygia_guttata
ENSPLAG00000020460	sf3b6	100	100.000	ENSTRUG00000025286	sf3b6	100	100.000	Takifugu_rubripes
ENSPLAG00000020460	sf3b6	100	100.000	ENSTNIG00000009719	sf3b6	100	100.000	Tetraodon_nigroviridis
ENSPLAG00000020460	sf3b6	92	98.261	ENSTBEG00000012532	SF3B6	100	98.261	Tupaia_belangeri
ENSPLAG00000020460	sf3b6	92	98.261	ENSTTRG00000013430	SF3B6	100	98.261	Tursiops_truncatus
ENSPLAG00000020460	sf3b6	100	80.159	ENSUAMG00000000978	-	100	80.159	Ursus_americanus
ENSPLAG00000020460	sf3b6	100	98.400	ENSUAMG00000025329	SF3B6	100	98.400	Ursus_americanus
ENSPLAG00000020460	sf3b6	100	98.400	ENSUMAG00000022835	SF3B6	100	98.400	Ursus_maritimus
ENSPLAG00000020460	sf3b6	92	98.261	ENSVPAG00000005546	SF3B6	100	98.261	Vicugna_pacos
ENSPLAG00000020460	sf3b6	100	98.400	ENSVVUG00000010874	SF3B6	100	98.400	Vulpes_vulpes
ENSPLAG00000020460	sf3b6	100	97.600	ENSXETG00000018204	sf3b6	100	97.600	Xenopus_tropicalis
ENSPLAG00000020460	sf3b6	90	84.874	ENSXCOG00000008477	sf3b6	92	84.874	Xiphophorus_couchianus
ENSPLAG00000020460	sf3b6	100	100.000	ENSXMAG00000010747	sf3b6	100	100.000	Xiphophorus_maculatus