EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000020498 (Gene tree)
Gene ID: 106955201
Gene Symbol: ssb
Alias: -
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 7173 bases
Position: chrKQ545352.1:1142658-1149830
Accession: 106955201
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000016374	RRM_1	PF00076.22	7.6e-14	1	1
ENSPLAP00000016374	RRM_3	PF08777.11	8.7e-29	1	1
ENSPLAP00000016374	La	PF05383.17	3.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000025294	-	2062	XM_015045235	ENSPLAP00000016374	400 (aa)	XP_014900721	UPI00072D9AFF

Gene Model

Click here to download ENSPLAG00000020498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000020498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000020498	ssb	100	55.990	ENSG00000138385	SSB	98	64.407	Homo_sapiens
ENSPLAG00000020498	ssb	100	83.500	ENSAPOG00000003448	ssb	100	83.000	Acanthochromis_polyacanthus
ENSPLAG00000020498	ssb	100	55.131	ENSAMEG00000010507	SSB	99	55.131	Ailuropoda_melanoleuca
ENSPLAG00000020498	ssb	93	79.730	ENSACIG00000001738	ssb	95	79.726	Amphilophus_citrinellus
ENSPLAG00000020498	ssb	100	83.500	ENSAOCG00000020398	ssb	100	83.000	Amphiprion_ocellaris
ENSPLAG00000020498	ssb	100	84.000	ENSAPEG00000020395	ssb	100	83.500	Amphiprion_percula
ENSPLAG00000020498	ssb	100	83.500	ENSATEG00000016884	ssb	100	82.250	Anabas_testudineus
ENSPLAG00000020498	ssb	100	53.664	ENSAPLG00000006109	SSB	77	60.736	Anas_platyrhynchos
ENSPLAG00000020498	ssb	100	54.501	ENSACAG00000017008	SSB	99	54.501	Anolis_carolinensis
ENSPLAG00000020498	ssb	100	50.985	ENSANAG00000027195	-	99	50.122	Aotus_nancymaae
ENSPLAG00000020498	ssb	100	75.373	ENSACLG00000010798	ssb	100	75.124	Astatotilapia_calliptera
ENSPLAG00000020498	ssb	100	61.707	ENSAMXG00000012606	ssb	100	61.951	Astyanax_mexicanus
ENSPLAG00000020498	ssb	100	57.778	ENSBTAG00000008716	SSB	99	57.284	Bos_taurus
ENSPLAG00000020498	ssb	75	34.754	WBGene00016653	C44E4.4	76	34.754	Caenorhabditis_elegans
ENSPLAG00000020498	ssb	100	56.650	ENSCJAG00000045073	SSB	99	56.404	Callithrix_jacchus
ENSPLAG00000020498	ssb	100	57.248	ENSCAFG00000012418	SSB	99	57.002	Canis_familiaris
ENSPLAG00000020498	ssb	100	57.248	ENSCAFG00020002900	SSB	99	57.002	Canis_lupus_dingo
ENSPLAG00000020498	ssb	100	56.897	ENSCHIG00000022624	-	99	56.650	Capra_hircus
ENSPLAG00000020498	ssb	100	53.202	ENSCHIG00000022196	-	83	58.434	Capra_hircus
ENSPLAG00000020498	ssb	99	56.790	ENSTSYG00000000097	SSB	99	56.543	Carlito_syrichta
ENSPLAG00000020498	ssb	100	57.635	ENSCPOG00000003338	SSB	99	57.389	Cavia_porcellus
ENSPLAG00000020498	ssb	100	56.650	ENSCCAG00000035147	SSB	99	56.404	Cebus_capucinus
ENSPLAG00000020498	ssb	72	52.577	ENSCATG00000036701	SSB	83	52.234	Cercocebus_atys
ENSPLAG00000020498	ssb	98	43.325	ENSCATG00000042909	-	96	42.821	Cercocebus_atys
ENSPLAG00000020498	ssb	100	56.897	ENSCLAG00000015617	-	99	56.650	Chinchilla_lanigera
ENSPLAG00000020498	ssb	97	52.308	ENSCSAG00000018390	-	97	52.051	Chlorocebus_sabaeus
ENSPLAG00000020498	ssb	100	56.897	ENSCSAG00000015200	SSB	88	56.650	Chlorocebus_sabaeus
ENSPLAG00000020498	ssb	100	56.897	ENSCHOG00000007763	SSB	99	56.650	Choloepus_hoffmanni
ENSPLAG00000020498	ssb	100	59.024	ENSCPBG00000006519	SSB	99	59.268	Chrysemys_picta_bellii
ENSPLAG00000020498	ssb	100	56.897	ENSCANG00000027695	SSB	99	56.650	Colobus_angolensis_palliatus
ENSPLAG00000020498	ssb	93	45.455	ENSCANG00000028838	-	84	45.556	Colobus_angolensis_palliatus
ENSPLAG00000020498	ssb	100	49.015	ENSCANG00000033240	-	99	47.654	Colobus_angolensis_palliatus
ENSPLAG00000020498	ssb	100	52.088	ENSCGRG00001024831	Ssb	99	51.843	Cricetulus_griseus_chok1gshd
ENSPLAG00000020498	ssb	100	52.088	ENSCGRG00000005387	Ssb	99	51.843	Cricetulus_griseus_crigri
ENSPLAG00000020498	ssb	99	81.980	ENSCSEG00000011599	ssb	99	81.980	Cynoglossus_semilaevis
ENSPLAG00000020498	ssb	100	87.282	ENSCVAG00000021558	ssb	100	86.534	Cyprinodon_variegatus
ENSPLAG00000020498	ssb	100	64.938	ENSDARG00000029252	ssb	100	63.704	Danio_rerio
ENSPLAG00000020498	ssb	100	57.143	ENSDNOG00000013450	SSB	99	56.897	Dasypus_novemcinctus
ENSPLAG00000020498	ssb	100	52.580	ENSDORG00000005543	Ssb	99	52.334	Dipodomys_ordii
ENSPLAG00000020498	ssb	85	35.028	FBgn0011638	La	80	34.718	Drosophila_melanogaster
ENSPLAG00000020498	ssb	51	62.376	ENSETEG00000004614	-	52	62.376	Echinops_telfairi
ENSPLAG00000020498	ssb	98	45.823	ENSEBUG00000001237	ssb	96	45.524	Eptatretus_burgeri
ENSPLAG00000020498	ssb	100	57.389	ENSEASG00005022835	SSB	99	57.143	Equus_asinus_asinus
ENSPLAG00000020498	ssb	100	57.389	ENSECAG00000018495	SSB	99	57.143	Equus_caballus
ENSPLAG00000020498	ssb	76	47.403	ENSEEUG00000008077	SSB	78	47.403	Erinaceus_europaeus
ENSPLAG00000020498	ssb	100	69.212	ENSELUG00000020929	ssb	100	66.005	Esox_lucius
ENSPLAG00000020498	ssb	100	58.231	ENSFCAG00000011601	SSB	99	57.985	Felis_catus
ENSPLAG00000020498	ssb	99	56.511	ENSFALG00000000930	SSB	99	56.020	Ficedula_albicollis
ENSPLAG00000020498	ssb	100	57.143	ENSFDAG00000000598	SSB	99	56.897	Fukomys_damarensis
ENSPLAG00000020498	ssb	74	85.762	ENSFHEG00000003268	ssb	92	85.667	Fundulus_heteroclitus
ENSPLAG00000020498	ssb	99	71.642	ENSGMOG00000002664	ssb	100	70.149	Gadus_morhua
ENSPLAG00000020498	ssb	99	56.235	ENSGALG00000009677	SSB	99	54.768	Gallus_gallus
ENSPLAG00000020498	ssb	100	97.519	ENSGAFG00000002749	ssb	100	97.519	Gambusia_affinis
ENSPLAG00000020498	ssb	100	77.941	ENSGACG00000005107	ssb	100	77.340	Gasterosteus_aculeatus
ENSPLAG00000020498	ssb	100	58.537	ENSGAGG00000007807	SSB	99	58.780	Gopherus_agassizii
ENSPLAG00000020498	ssb	100	48.768	ENSGGOG00000024891	-	99	48.276	Gorilla_gorilla
ENSPLAG00000020498	ssb	54	52.941	ENSGGOG00000023471	-	89	52.489	Gorilla_gorilla
ENSPLAG00000020498	ssb	100	75.373	ENSHBUG00000006584	ssb	100	74.813	Haplochromis_burtoni
ENSPLAG00000020498	ssb	100	56.796	ENSHGLG00000017580	-	99	56.448	Heterocephalus_glaber_female
ENSPLAG00000020498	ssb	100	51.613	ENSHGLG00000005832	-	99	50.372	Heterocephalus_glaber_female
ENSPLAG00000020498	ssb	100	51.843	ENSHGLG00000004478	-	99	51.597	Heterocephalus_glaber_female
ENSPLAG00000020498	ssb	100	56.796	ENSHGLG00100003084	-	99	56.448	Heterocephalus_glaber_male
ENSPLAG00000020498	ssb	100	51.365	ENSHGLG00100008767	-	99	51.117	Heterocephalus_glaber_male
ENSPLAG00000020498	ssb	99	75.443	ENSHCOG00000019011	ssb	99	75.443	Hippocampus_comes
ENSPLAG00000020498	ssb	100	63.592	ENSIPUG00000003681	SSB	100	61.800	Ictalurus_punctatus
ENSPLAG00000020498	ssb	100	56.404	ENSSTOG00000008416	SSB	99	55.665	Ictidomys_tridecemlineatus
ENSPLAG00000020498	ssb	100	51.190	ENSJJAG00000023158	-	79	55.422	Jaculus_jaculus
ENSPLAG00000020498	ssb	89	45.810	ENSJJAG00000016250	-	94	45.278	Jaculus_jaculus
ENSPLAG00000020498	ssb	100	85.000	ENSKMAG00000017317	ssb	100	84.500	Kryptolebias_marmoratus
ENSPLAG00000020498	ssb	100	83.750	ENSLBEG00000017345	ssb	100	82.750	Labrus_bergylta
ENSPLAG00000020498	ssb	100	55.501	ENSLACG00000014056	SSB	99	55.501	Latimeria_chalumnae
ENSPLAG00000020498	ssb	100	65.770	ENSLOCG00000007933	ssb	99	65.356	Lepisosteus_oculatus
ENSPLAG00000020498	ssb	74	42.712	ENSLAFG00000026721	-	97	42.712	Loxodonta_africana
ENSPLAG00000020498	ssb	100	53.207	ENSLAFG00000000867	-	99	53.682	Loxodonta_africana
ENSPLAG00000020498	ssb	100	49.383	ENSLAFG00000028909	-	99	47.901	Loxodonta_africana
ENSPLAG00000020498	ssb	90	49.030	ENSMFAG00000041478	-	91	51.672	Macaca_fascicularis
ENSPLAG00000020498	ssb	100	56.897	ENSMFAG00000039066	SSB	99	56.650	Macaca_fascicularis
ENSPLAG00000020498	ssb	100	48.649	ENSMMUG00000011724	-	78	52.280	Macaca_mulatta
ENSPLAG00000020498	ssb	100	56.897	ENSMMUG00000023051	SSB	99	56.650	Macaca_mulatta
ENSPLAG00000020498	ssb	98	42.569	ENSMMUG00000039889	-	97	42.317	Macaca_mulatta
ENSPLAG00000020498	ssb	100	48.780	ENSMNEG00000028321	SSB	85	67.826	Macaca_nemestrina
ENSPLAG00000020498	ssb	90	49.030	ENSMNEG00000034698	-	91	51.672	Macaca_nemestrina
ENSPLAG00000020498	ssb	100	56.897	ENSMLEG00000035717	SSB	88	67.826	Mandrillus_leucophaeus
ENSPLAG00000020498	ssb	100	39.506	ENSMLEG00000042644	-	79	41.641	Mandrillus_leucophaeus
ENSPLAG00000020498	ssb	100	83.250	ENSMAMG00000004800	ssb	100	82.250	Mastacembelus_armatus
ENSPLAG00000020498	ssb	100	75.373	ENSMZEG00005005749	ssb	100	75.124	Maylandia_zebra
ENSPLAG00000020498	ssb	99	56.479	ENSMGAG00000010328	SSB	95	61.929	Meleagris_gallopavo
ENSPLAG00000020498	ssb	100	56.897	ENSMICG00000028252	-	99	56.650	Microcebus_murinus
ENSPLAG00000020498	ssb	92	54.743	ENSMICG00000033304	-	93	53.261	Microcebus_murinus
ENSPLAG00000020498	ssb	100	42.752	ENSMODG00000007027	-	88	39.402	Monodelphis_domestica
ENSPLAG00000020498	ssb	100	54.988	ENSMODG00000008227	-	99	54.501	Monodelphis_domestica
ENSPLAG00000020498	ssb	100	42.963	ENSMODG00000019271	-	51	52.809	Monodelphis_domestica
ENSPLAG00000020498	ssb	91	81.096	ENSMALG00000008045	ssb	88	81.096	Monopterus_albus
ENSPLAG00000020498	ssb	100	52.278	MGP_CAROLIEiJ_G0023629	-	98	62.179	Mus_caroli
ENSPLAG00000020498	ssb	100	52.278	ENSMUSG00000068882	Ssb	98	62.179	Mus_musculus
ENSPLAG00000020498	ssb	100	52.038	MGP_PahariEiJ_G0025081	-	98	61.538	Mus_pahari
ENSPLAG00000020498	ssb	100	52.278	MGP_SPRETEiJ_G0024551	Ssb	98	62.179	Mus_spretus
ENSPLAG00000020498	ssb	100	57.635	ENSMPUG00000000785	SSB	99	57.389	Mustela_putorius_furo
ENSPLAG00000020498	ssb	100	55.663	ENSMLUG00000016316	SSB	99	55.422	Myotis_lucifugus
ENSPLAG00000020498	ssb	100	74.564	ENSNBRG00000012661	ssb	100	74.564	Neolamprologus_brichardi
ENSPLAG00000020498	ssb	100	56.650	ENSNLEG00000004958	SSB	99	56.404	Nomascus_leucogenys
ENSPLAG00000020498	ssb	95	42.408	ENSNLEG00000028754	-	78	45.783	Nomascus_leucogenys
ENSPLAG00000020498	ssb	62	61.200	ENSMEUG00000001650	-	100	61.200	Notamacropus_eugenii
ENSPLAG00000020498	ssb	94	56.000	ENSODEG00000004202	-	99	55.467	Octodon_degus
ENSPLAG00000020498	ssb	100	76.119	ENSONIG00000008776	ssb	100	75.810	Oreochromis_niloticus
ENSPLAG00000020498	ssb	100	56.158	ENSOANG00000008543	SSB	99	56.158	Ornithorhynchus_anatinus
ENSPLAG00000020498	ssb	100	56.158	ENSOCUG00000010396	SSB	99	55.911	Oryctolagus_cuniculus
ENSPLAG00000020498	ssb	100	80.750	ENSORLG00000017208	ssb	100	80.750	Oryzias_latipes
ENSPLAG00000020498	ssb	100	81.297	ENSORLG00020022574	ssb	100	81.297	Oryzias_latipes_hni
ENSPLAG00000020498	ssb	100	81.250	ENSORLG00015016592	ssb	100	81.250	Oryzias_latipes_hsok
ENSPLAG00000020498	ssb	100	82.544	ENSOMEG00000003193	ssb	100	82.544	Oryzias_melastigma
ENSPLAG00000020498	ssb	100	54.157	ENSOGAG00000029768	SSB	99	53.919	Otolemur_garnettii
ENSPLAG00000020498	ssb	100	56.897	ENSOARG00000002906	SSB	99	56.650	Ovis_aries
ENSPLAG00000020498	ssb	90	48.343	ENSPPAG00000006189	-	91	45.304	Pan_paniscus
ENSPLAG00000020498	ssb	100	48.276	ENSPPAG00000032427	-	100	58.140	Pan_paniscus
ENSPLAG00000020498	ssb	100	55.990	ENSPPAG00000042673	SSB	99	55.746	Pan_paniscus
ENSPLAG00000020498	ssb	100	58.231	ENSPPRG00000006599	SSB	99	57.985	Panthera_pardus
ENSPLAG00000020498	ssb	100	58.231	ENSPTIG00000011021	SSB	97	57.985	Panthera_tigris_altaica
ENSPLAG00000020498	ssb	100	46.059	ENSPTRG00000042880	-	99	46.059	Pan_troglodytes
ENSPLAG00000020498	ssb	100	55.990	ENSPTRG00000012620	SSB	99	55.746	Pan_troglodytes
ENSPLAG00000020498	ssb	95	39.583	ENSPANG00000031877	-	75	41.562	Papio_anubis
ENSPLAG00000020498	ssb	98	42.317	ENSPANG00000034126	-	96	42.065	Papio_anubis
ENSPLAG00000020498	ssb	100	56.897	ENSPANG00000007440	SSB	99	56.650	Papio_anubis
ENSPLAG00000020498	ssb	100	68.905	ENSPKIG00000019325	ssb	99	68.905	Paramormyrops_kingsleyae
ENSPLAG00000020498	ssb	100	58.293	ENSPSIG00000002265	SSB	93	58.537	Pelodiscus_sinensis
ENSPLAG00000020498	ssb	89	70.986	ENSPMGG00000020075	ssb	90	71.014	Periophthalmus_magnuspinnatus
ENSPLAG00000020498	ssb	89	45.152	ENSPMAG00000002982	ssb	84	44.628	Petromyzon_marinus
ENSPLAG00000020498	ssb	95	57.812	ENSPCIG00000028591	-	99	56.650	Phascolarctos_cinereus
ENSPLAG00000020498	ssb	100	99.500	ENSPFOG00000009650	ssb	100	99.500	Poecilia_formosa
ENSPLAG00000020498	ssb	100	98.750	ENSPMEG00000001051	ssb	100	98.750	Poecilia_mexicana
ENSPLAG00000020498	ssb	95	97.619	ENSPREG00000003708	ssb	99	97.619	Poecilia_reticulata
ENSPLAG00000020498	ssb	100	56.650	ENSPPYG00000012919	SSB	99	56.404	Pongo_abelii
ENSPLAG00000020498	ssb	95	55.729	ENSPCAG00000010276	SSB	99	55.729	Procavia_capensis
ENSPLAG00000020498	ssb	100	50.739	ENSPCOG00000023189	-	99	50.493	Propithecus_coquereli
ENSPLAG00000020498	ssb	100	55.172	ENSPCOG00000015741	-	92	66.379	Propithecus_coquereli
ENSPLAG00000020498	ssb	89	58.989	ENSPVAG00000006615	SSB	88	61.613	Pteropus_vampyrus
ENSPLAG00000020498	ssb	100	75.373	ENSPNYG00000006444	ssb	100	75.124	Pundamilia_nyererei
ENSPLAG00000020498	ssb	100	62.683	ENSPNAG00000011708	ssb	100	60.976	Pygocentrus_nattereri
ENSPLAG00000020498	ssb	100	51.799	ENSRNOG00000007998	Ssb	79	56.325	Rattus_norvegicus
ENSPLAG00000020498	ssb	100	52.475	ENSRNOG00000011606	AABR07061825.1	99	51.980	Rattus_norvegicus
ENSPLAG00000020498	ssb	87	52.857	ENSRBIG00000041608	-	94	49.860	Rhinopithecus_bieti
ENSPLAG00000020498	ssb	100	49.512	ENSRBIG00000041972	SSB	88	67.826	Rhinopithecus_bieti
ENSPLAG00000020498	ssb	98	41.457	ENSRBIG00000029918	-	96	41.206	Rhinopithecus_bieti
ENSPLAG00000020498	ssb	94	48.421	ENSRBIG00000041232	-	98	47.230	Rhinopithecus_bieti
ENSPLAG00000020498	ssb	98	48.615	ENSRROG00000031684	-	91	55.556	Rhinopithecus_roxellana
ENSPLAG00000020498	ssb	87	55.143	ENSRROG00000034102	-	96	50.630	Rhinopithecus_roxellana
ENSPLAG00000020498	ssb	98	46.734	ENSRROG00000007149	-	97	46.482	Rhinopithecus_roxellana
ENSPLAG00000020498	ssb	100	56.897	ENSRROG00000040346	SSB	99	56.650	Rhinopithecus_roxellana
ENSPLAG00000020498	ssb	100	56.897	ENSSBOG00000027204	SSB	99	56.650	Saimiri_boliviensis_boliviensis
ENSPLAG00000020498	ssb	100	56.650	ENSSHAG00000018062	SSB	99	56.404	Sarcophilus_harrisii
ENSPLAG00000020498	ssb	100	66.749	ENSSFOG00015000550	ssb	99	66.749	Scleropages_formosus
ENSPLAG00000020498	ssb	100	79.500	ENSSMAG00000013885	ssb	98	83.607	Scophthalmus_maximus
ENSPLAG00000020498	ssb	100	85.250	ENSSDUG00000020117	ssb	100	84.750	Seriola_dumerili
ENSPLAG00000020498	ssb	100	81.000	ENSSLDG00000002525	ssb	100	79.750	Seriola_lalandi_dorsalis
ENSPLAG00000020498	ssb	95	52.344	ENSSARG00000007747	SSB	99	52.083	Sorex_araneus
ENSPLAG00000020498	ssb	100	58.191	ENSSPUG00000012112	SSB	99	57.843	Sphenodon_punctatus
ENSPLAG00000020498	ssb	100	82.750	ENSSPAG00000005696	ssb	100	82.250	Stegastes_partitus
ENSPLAG00000020498	ssb	92	55.285	ENSSSCG00000015938	SSB	82	55.120	Sus_scrofa
ENSPLAG00000020498	ssb	93	57.754	ENSTGUG00000007942	SSB	99	55.990	Taeniopygia_guttata
ENSPLAG00000020498	ssb	100	76.500	ENSTRUG00000017839	ssb	100	79.250	Takifugu_rubripes
ENSPLAG00000020498	ssb	92	76.965	ENSTNIG00000000915	ssb	99	75.616	Tetraodon_nigroviridis
ENSPLAG00000020498	ssb	82	67.826	ENSTBEG00000009056	SSB	72	67.826	Tupaia_belangeri
ENSPLAG00000020498	ssb	100	57.740	ENSTTRG00000002152	SSB	99	56.757	Tursiops_truncatus
ENSPLAG00000020498	ssb	94	58.466	ENSUAMG00000027833	SSB	96	58.152	Ursus_americanus
ENSPLAG00000020498	ssb	100	57.002	ENSUMAG00000013907	SSB	99	56.757	Ursus_maritimus
ENSPLAG00000020498	ssb	100	57.426	ENSVPAG00000007183	SSB	99	57.178	Vicugna_pacos
ENSPLAG00000020498	ssb	100	57.248	ENSVVUG00000016573	SSB	77	57.002	Vulpes_vulpes
ENSPLAG00000020498	ssb	99	52.570	ENSXETG00000025402	ssb	99	51.402	Xenopus_tropicalis
ENSPLAG00000020498	ssb	94	91.777	ENSXCOG00000019109	ssb	95	91.781	Xiphophorus_couchianus
ENSPLAG00000020498	ssb	100	94.293	ENSXMAG00000004888	ssb	100	92.804	Xiphophorus_maculatus