EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000020523 (Gene tree)
Gene ID: 106948836
Gene Symbol: shrprbck1r
Alias: -
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 10827 bases
Position: chrKQ545624.1:48050-58876
Accession: 106948836
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000016401	zf-RanBP	PF00641.18	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000031048	-	4007	XM_015034704	ENSPLAP00000016401	705 (aa)	XP_014890190	UPI00072D9B78

Gene Model

Click here to download ENSPLAG00000020523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000020523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000020523	shrprbck1r	59	53.828	ENSPLAG00000000423	sharpin	95	53.828

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000020523	shrprbck1r	100	80.505	ENSAPOG00000022737	shrprbck1r	100	80.505	Acanthochromis_polyacanthus
ENSPLAG00000020523	shrprbck1r	59	57.044	ENSAPOG00000023352	sharpin	95	57.044	Acanthochromis_polyacanthus
ENSPLAG00000020523	shrprbck1r	100	79.887	ENSACIG00000002184	shrprbck1r	100	79.887	Amphilophus_citrinellus
ENSPLAG00000020523	shrprbck1r	59	56.682	ENSAOCG00000017464	sharpin	95	56.682	Amphiprion_ocellaris
ENSPLAG00000020523	shrprbck1r	100	82.865	ENSAOCG00000002890	shrprbck1r	100	82.865	Amphiprion_ocellaris
ENSPLAG00000020523	shrprbck1r	59	56.682	ENSAPEG00000004049	sharpin	95	56.682	Amphiprion_percula
ENSPLAG00000020523	shrprbck1r	100	81.066	ENSAPEG00000023274	shrprbck1r	100	81.066	Amphiprion_percula
ENSPLAG00000020523	shrprbck1r	60	57.674	ENSATEG00000007832	sharpin	88	57.674	Anabas_testudineus
ENSPLAG00000020523	shrprbck1r	100	78.592	ENSATEG00000014561	shrprbck1r	100	78.873	Anabas_testudineus
ENSPLAG00000020523	shrprbck1r	100	78.340	ENSACLG00000022609	shrprbck1r	100	79.044	Astatotilapia_calliptera
ENSPLAG00000020523	shrprbck1r	100	67.984	ENSAMXG00000021016	shrprbck1r	100	68.219	Astyanax_mexicanus
ENSPLAG00000020523	shrprbck1r	54	56.104	ENSAMXG00000006229	sharpin	97	56.104	Astyanax_mexicanus
ENSPLAG00000020523	shrprbck1r	100	71.809	ENSCSEG00000011306	shrprbck1r	100	72.090	Cynoglossus_semilaevis
ENSPLAG00000020523	shrprbck1r	100	91.114	ENSCVAG00000007250	shrprbck1r	100	91.114	Cyprinodon_variegatus
ENSPLAG00000020523	shrprbck1r	59	53.953	ENSCVAG00000006586	sharpin	95	53.953	Cyprinodon_variegatus
ENSPLAG00000020523	shrprbck1r	100	67.822	ENSDARG00000059871	shrprbck1r	100	67.961	Danio_rerio
ENSPLAG00000020523	shrprbck1r	54	55.013	ENSDARG00000076995	sharpin	94	55.013	Danio_rerio
ENSPLAG00000020523	shrprbck1r	100	71.189	ENSELUG00000016022	shrprbck1r	100	71.189	Esox_lucius
ENSPLAG00000020523	shrprbck1r	59	52.955	ENSFHEG00000013564	sharpin	94	52.955	Fundulus_heteroclitus
ENSPLAG00000020523	shrprbck1r	59	42.657	ENSGAFG00000021405	sharpin	95	42.657	Gambusia_affinis
ENSPLAG00000020523	shrprbck1r	100	96.312	ENSGAFG00000009309	shrprbck1r	100	96.312	Gambusia_affinis
ENSPLAG00000020523	shrprbck1r	75	78.748	ENSGACG00000002544	shrprbck1r	99	78.748	Gasterosteus_aculeatus
ENSPLAG00000020523	shrprbck1r	100	79.044	ENSHBUG00000021933	shrprbck1r	100	79.184	Haplochromis_burtoni
ENSPLAG00000020523	shrprbck1r	60	52.804	ENSHCOG00000018847	sharpin	81	53.738	Hippocampus_comes
ENSPLAG00000020523	shrprbck1r	54	54.756	ENSIPUG00000011951	sharpin	99	54.756	Ictalurus_punctatus
ENSPLAG00000020523	shrprbck1r	96	66.955	ENSIPUG00000014247	shrprbck1r	98	65.599	Ictalurus_punctatus
ENSPLAG00000020523	shrprbck1r	100	77.978	ENSKMAG00000015215	shrprbck1r	100	77.366	Kryptolebias_marmoratus
ENSPLAG00000020523	shrprbck1r	59	55.991	ENSKMAG00000015204	sharpin	76	56.019	Kryptolebias_marmoratus
ENSPLAG00000020523	shrprbck1r	100	79.859	ENSLBEG00000016876	shrprbck1r	100	80.423	Labrus_bergylta
ENSPLAG00000020523	shrprbck1r	60	56.393	ENSLBEG00000016624	sharpin	96	56.393	Labrus_bergylta
ENSPLAG00000020523	shrprbck1r	95	53.061	ENSLACG00000010948	-	97	53.061	Latimeria_chalumnae
ENSPLAG00000020523	shrprbck1r	100	67.129	ENSLOCG00000008910	shrprbck1r	100	67.590	Lepisosteus_oculatus
ENSPLAG00000020523	shrprbck1r	54	61.538	ENSMAMG00000014645	sharpin	95	61.538	Mastacembelus_armatus
ENSPLAG00000020523	shrprbck1r	100	78.310	ENSMAMG00000022930	shrprbck1r	100	78.451	Mastacembelus_armatus
ENSPLAG00000020523	shrprbck1r	100	78.200	ENSMZEG00005021257	shrprbck1r	100	78.903	Maylandia_zebra
ENSPLAG00000020523	shrprbck1r	100	76.151	ENSMMOG00000003764	shrprbck1r	100	76.151	Mola_mola
ENSPLAG00000020523	shrprbck1r	54	61.538	ENSMALG00000020528	sharpin	96	61.538	Monopterus_albus
ENSPLAG00000020523	shrprbck1r	96	79.971	ENSMALG00000008861	shrprbck1r	95	79.971	Monopterus_albus
ENSPLAG00000020523	shrprbck1r	100	79.044	ENSNBRG00000002270	shrprbck1r	100	79.747	Neolamprologus_brichardi
ENSPLAG00000020523	shrprbck1r	100	78.762	ENSONIG00000014401	shrprbck1r	100	79.466	Oreochromis_niloticus
ENSPLAG00000020523	shrprbck1r	54	54.167	ENSONIG00000009626	-	97	54.167	Oreochromis_niloticus
ENSPLAG00000020523	shrprbck1r	100	79.126	ENSORLG00000007392	shrprbck1r	100	79.126	Oryzias_latipes
ENSPLAG00000020523	shrprbck1r	59	53.953	ENSORLG00000017281	sharpin	95	53.953	Oryzias_latipes
ENSPLAG00000020523	shrprbck1r	59	53.917	ENSORLG00020000801	sharpin	95	53.917	Oryzias_latipes_hni
ENSPLAG00000020523	shrprbck1r	100	78.561	ENSORLG00020018619	shrprbck1r	100	78.561	Oryzias_latipes_hni
ENSPLAG00000020523	shrprbck1r	100	78.420	ENSORLG00015018865	shrprbck1r	100	78.420	Oryzias_latipes_hsok
ENSPLAG00000020523	shrprbck1r	59	53.917	ENSORLG00015009860	sharpin	95	53.917	Oryzias_latipes_hsok
ENSPLAG00000020523	shrprbck1r	50	67.742	ENSOMEG00000005729	sharpin	80	51.084	Oryzias_melastigma
ENSPLAG00000020523	shrprbck1r	100	80.536	ENSOMEG00000012749	shrprbck1r	100	80.536	Oryzias_melastigma
ENSPLAG00000020523	shrprbck1r	100	70.308	ENSPKIG00000006933	shrprbck1r	100	70.308	Paramormyrops_kingsleyae
ENSPLAG00000020523	shrprbck1r	65	59.362	ENSPKIG00000018308	-	95	59.362	Paramormyrops_kingsleyae
ENSPLAG00000020523	shrprbck1r	100	73.305	ENSPMGG00000013254	shrprbck1r	100	73.305	Periophthalmus_magnuspinnatus
ENSPLAG00000020523	shrprbck1r	59	53.596	ENSPFOG00000015253	sharpin	95	53.596	Poecilia_formosa
ENSPLAG00000020523	shrprbck1r	100	99.149	ENSPFOG00000004214	shrprbck1r	100	99.149	Poecilia_formosa
ENSPLAG00000020523	shrprbck1r	100	95.603	ENSPMEG00000006877	shrprbck1r	100	95.603	Poecilia_mexicana
ENSPLAG00000020523	shrprbck1r	55	50.000	ENSPMEG00000023030	sharpin	89	50.000	Poecilia_mexicana
ENSPLAG00000020523	shrprbck1r	100	94.043	ENSPREG00000014689	shrprbck1r	100	94.043	Poecilia_reticulata
ENSPLAG00000020523	shrprbck1r	59	53.935	ENSPREG00000009702	sharpin	95	53.935	Poecilia_reticulata
ENSPLAG00000020523	shrprbck1r	100	78.622	ENSPNYG00000022601	shrprbck1r	100	79.325	Pundamilia_nyererei
ENSPLAG00000020523	shrprbck1r	100	67.125	ENSPNAG00000007847	shrprbck1r	100	67.808	Pygocentrus_nattereri
ENSPLAG00000020523	shrprbck1r	54	54.688	ENSPNAG00000002911	sharpin	99	54.805	Pygocentrus_nattereri
ENSPLAG00000020523	shrprbck1r	75	63.019	ENSSFOG00015014150	-	96	63.019	Scleropages_formosus
ENSPLAG00000020523	shrprbck1r	63	53.086	ENSSFOG00015004028	sharpin	99	54.141	Scleropages_formosus
ENSPLAG00000020523	shrprbck1r	100	77.254	ENSSMAG00000018085	shrprbck1r	100	77.531	Scophthalmus_maximus
ENSPLAG00000020523	shrprbck1r	60	44.671	ENSSDUG00000019039	sharpin	96	44.671	Seriola_dumerili
ENSPLAG00000020523	shrprbck1r	100	82.113	ENSSDUG00000002959	shrprbck1r	100	82.394	Seriola_dumerili
ENSPLAG00000020523	shrprbck1r	100	81.831	ENSSLDG00000009026	shrprbck1r	100	82.113	Seriola_lalandi_dorsalis
ENSPLAG00000020523	shrprbck1r	96	78.955	ENSSPAG00000016097	shrprbck1r	99	78.955	Stegastes_partitus
ENSPLAG00000020523	shrprbck1r	100	74.579	ENSTRUG00000006949	shrprbck1r	100	75.281	Takifugu_rubripes
ENSPLAG00000020523	shrprbck1r	59	52.594	ENSTRUG00000011046	sharpin	96	53.318	Takifugu_rubripes
ENSPLAG00000020523	shrprbck1r	54	54.912	ENSTNIG00000008521	sharpin	94	54.912	Tetraodon_nigroviridis
ENSPLAG00000020523	shrprbck1r	59	42.790	ENSXCOG00000015019	sharpin	96	42.790	Xiphophorus_couchianus
ENSPLAG00000020523	shrprbck1r	100	92.210	ENSXCOG00000006701	shrprbck1r	100	92.210	Xiphophorus_couchianus
ENSPLAG00000020523	shrprbck1r	100	92.068	ENSXMAG00000018972	shrprbck1r	100	92.068	Xiphophorus_maculatus
ENSPLAG00000020523	shrprbck1r	59	53.613	ENSXMAG00000022076	sharpin	95	53.613	Xiphophorus_maculatus