EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000020627 (Gene tree)
Gene ID: 106962314
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 3613 bases
Position: chrKQ545375.1:328961-332573
Accession: 106962314
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000016460	MMR_HSR1	PF01926.23	9.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000025417	-	2600	XM_015056665	ENSPLAP00000016460	234 (aa)	XP_014912151	UPI00072E2077

Gene Model

Click here to download ENSPLAG00000020627's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000020627's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000020627	zgc:101559	70	35.976	ENSPLAG00000011697	rab23	71	37.162
ENSPLAG00000020627	zgc:101559	78	36.612	ENSPLAG00000008004	rab25b	83	36.612
ENSPLAG00000020627	zgc:101559	70	42.683	ENSPLAG00000003181	-	80	42.683
ENSPLAG00000020627	zgc:101559	63	40.136	ENSPLAG00000010104	rab18a	71	40.136
ENSPLAG00000020627	zgc:101559	76	44.944	ENSPLAG00000006520	rab1ab	83	44.944
ENSPLAG00000020627	zgc:101559	71	37.725	ENSPLAG00000022515	-	75	37.725
ENSPLAG00000020627	zgc:101559	73	38.012	ENSPLAG00000016333	-	76	38.012
ENSPLAG00000020627	zgc:101559	64	33.117	ENSPLAG00000002600	RAB29	71	33.117
ENSPLAG00000020627	zgc:101559	74	37.931	ENSPLAG00000019707	rab6bb	81	37.931
ENSPLAG00000020627	zgc:101559	64	42.282	ENSPLAG00000019570	rab6a	71	42.282
ENSPLAG00000020627	zgc:101559	67	36.943	ENSPLAG00000009352	KRAS	97	34.694
ENSPLAG00000020627	zgc:101559	73	39.181	ENSPLAG00000017838	rab5aa	77	39.181
ENSPLAG00000020627	zgc:101559	82	32.178	ENSPLAG00000014563	rab4a	92	32.178
ENSPLAG00000020627	zgc:101559	74	31.792	ENSPLAG00000001529	rheb	93	31.792
ENSPLAG00000020627	zgc:101559	63	40.667	ENSPLAG00000007773	si:dkey-34d22.5	67	40.667
ENSPLAG00000020627	zgc:101559	74	33.146	ENSPLAG00000006777	-	80	33.146
ENSPLAG00000020627	zgc:101559	63	43.537	ENSPLAG00000023128	RAB15	69	43.537
ENSPLAG00000020627	zgc:101559	70	45.732	ENSPLAG00000021043	si:dkey-16l2.16	76	45.732
ENSPLAG00000020627	zgc:101559	66	33.121	ENSPLAG00000022926	rab9a	77	33.121
ENSPLAG00000020627	zgc:101559	74	39.306	ENSPLAG00000014243	rab11ba	78	39.306
ENSPLAG00000020627	zgc:101559	78	38.144	ENSPLAG00000017232	rab22a	96	38.144
ENSPLAG00000020627	zgc:101559	93	57.798	ENSPLAG00000005189	rab33a	94	57.399
ENSPLAG00000020627	zgc:101559	57	31.159	ENSPLAG00000017420	arl4aa	68	31.159
ENSPLAG00000020627	zgc:101559	67	46.154	ENSPLAG00000020989	rab35b	95	40.722
ENSPLAG00000020627	zgc:101559	70	42.683	ENSPLAG00000005832	RAB13	85	42.683
ENSPLAG00000020627	zgc:101559	64	39.597	ENSPLAG00000022260	rab6ba	71	39.597
ENSPLAG00000020627	zgc:101559	79	34.409	ENSPLAG00000003379	hrasb	97	34.848
ENSPLAG00000020627	zgc:101559	83	36.816	ENSPLAG00000001065	-	94	36.816
ENSPLAG00000020627	zgc:101559	78	38.144	ENSPLAG00000018718	rab22a	96	38.144
ENSPLAG00000020627	zgc:101559	67	32.919	ENSPLAG00000002398	rasl11b	65	32.919
ENSPLAG00000020627	zgc:101559	65	37.179	ENSPLAG00000019688	si:dkey-13a21.4	75	37.179
ENSPLAG00000020627	zgc:101559	63	35.135	ENSPLAG00000015650	rhebl1	79	35.135
ENSPLAG00000020627	zgc:101559	86	61.244	ENSPLAG00000021278	rab33ba	88	59.722
ENSPLAG00000020627	zgc:101559	78	44.262	ENSPLAG00000005869	zgc:171927	80	44.262
ENSPLAG00000020627	zgc:101559	65	36.306	ENSPLAG00000007015	rab9a	73	36.306
ENSPLAG00000020627	zgc:101559	63	43.243	ENSPLAG00000005628	rab42a	67	43.243
ENSPLAG00000020627	zgc:101559	74	39.884	ENSPLAG00000014207	-	78	39.884
ENSPLAG00000020627	zgc:101559	67	46.541	ENSPLAG00000007237	RAB39B	74	46.541
ENSPLAG00000020627	zgc:101559	70	31.548	ENSPLAG00000008845	dnajc27	61	31.548
ENSPLAG00000020627	zgc:101559	78	37.158	ENSPLAG00000003558	rab25a	82	37.158
ENSPLAG00000020627	zgc:101559	64	37.908	ENSPLAG00000011866	rab9b	68	37.908
ENSPLAG00000020627	zgc:101559	85	35.294	ENSPLAG00000000376	rab41	93	35.294
ENSPLAG00000020627	zgc:101559	53	34.959	ENSPLAG00000019120	-	62	34.959
ENSPLAG00000020627	zgc:101559	71	47.305	ENSPLAG00000015383	rab30	80	47.305
ENSPLAG00000020627	zgc:101559	73	38.012	ENSPLAG00000004790	rab5c	75	38.012
ENSPLAG00000020627	zgc:101559	66	46.452	ENSPLAG00000018322	-	72	46.452
ENSPLAG00000020627	zgc:101559	55	35.878	ENSPLAG00000015685	rabl2	58	35.878
ENSPLAG00000020627	zgc:101559	71	38.323	ENSPLAG00000004551	-	75	38.323
ENSPLAG00000020627	zgc:101559	76	43.820	ENSPLAG00000015592	-	84	43.820
ENSPLAG00000020627	zgc:101559	52	30.233	ENSPLAG00000014482	rabl3	65	30.233
ENSPLAG00000020627	zgc:101559	76	44.382	ENSPLAG00000018655	rab1ba	84	44.382
ENSPLAG00000020627	zgc:101559	69	31.056	ENSPLAG00000011855	si:ch73-116o1.2	81	32.370
ENSPLAG00000020627	zgc:101559	67	41.026	ENSPLAG00000023374	rab2a	73	41.026
ENSPLAG00000020627	zgc:101559	77	39.344	ENSPLAG00000013594	rab12	73	39.344
ENSPLAG00000020627	zgc:101559	71	30.539	ENSPLAG00000006192	nkiras1	85	30.539
ENSPLAG00000020627	zgc:101559	85	48.182	ENSPLAG00000016172	-	99	46.862
ENSPLAG00000020627	zgc:101559	78	39.011	ENSPLAG00000011175	rab11a	84	39.011
ENSPLAG00000020627	zgc:101559	74	38.150	ENSPLAG00000007986	rab11al	79	38.150
ENSPLAG00000020627	zgc:101559	63	40.816	ENSPLAG00000019136	rab18b	71	40.816
ENSPLAG00000020627	zgc:101559	63	42.177	ENSPLAG00000006354	rab15	68	42.177
ENSPLAG00000020627	zgc:101559	54	44.882	ENSPLAG00000005074	rab34b	50	44.882
ENSPLAG00000020627	zgc:101559	50	31.356	ENSPLAG00000019168	arl4d	58	31.356
ENSPLAG00000020627	zgc:101559	83	36.816	ENSPLAG00000002799	RAB7A	94	36.816
ENSPLAG00000020627	zgc:101559	74	35.000	ENSPLAG00000004043	rasl11a	69	35.000
ENSPLAG00000020627	zgc:101559	74	40.462	ENSPLAG00000001598	rab11bb	78	40.462
ENSPLAG00000020627	zgc:101559	72	31.548	ENSPLAG00000009163	rras	83	31.548

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000020627	zgc:101559	100	84.615	ENSAPOG00000007503	zgc:101559	100	84.615	Acanthochromis_polyacanthus
ENSPLAG00000020627	zgc:101559	90	87.143	ENSACIG00000021459	zgc:101559	92	87.143	Amphilophus_citrinellus
ENSPLAG00000020627	zgc:101559	100	85.470	ENSAOCG00000024675	zgc:101559	100	85.470	Amphiprion_ocellaris
ENSPLAG00000020627	zgc:101559	100	85.470	ENSAPEG00000005176	zgc:101559	100	85.470	Amphiprion_percula
ENSPLAG00000020627	zgc:101559	100	83.761	ENSATEG00000007761	zgc:101559	100	83.761	Anabas_testudineus
ENSPLAG00000020627	zgc:101559	99	84.979	ENSACLG00000027006	zgc:101559	99	84.979	Astatotilapia_calliptera
ENSPLAG00000020627	zgc:101559	99	73.418	ENSAMXG00000040460	zgc:101559	94	73.418	Astyanax_mexicanus
ENSPLAG00000020627	zgc:101559	100	77.778	ENSCSEG00000006243	zgc:101559	100	77.778	Cynoglossus_semilaevis
ENSPLAG00000020627	zgc:101559	100	93.162	ENSCVAG00000019227	zgc:101559	100	93.162	Cyprinodon_variegatus
ENSPLAG00000020627	zgc:101559	100	74.043	ENSDARG00000003257	zgc:101559	100	74.043	Danio_rerio
ENSPLAG00000020627	zgc:101559	100	90.598	ENSFHEG00000011483	zgc:101559	100	90.598	Fundulus_heteroclitus
ENSPLAG00000020627	zgc:101559	91	80.660	ENSGMOG00000011665	zgc:101559	99	80.660	Gadus_morhua
ENSPLAG00000020627	zgc:101559	100	94.444	ENSGAFG00000021202	zgc:101559	100	94.444	Gambusia_affinis
ENSPLAG00000020627	zgc:101559	91	81.132	ENSGACG00000001725	zgc:101559	91	81.132	Gasterosteus_aculeatus
ENSPLAG00000020627	zgc:101559	100	85.043	ENSHBUG00000007827	zgc:101559	100	85.043	Haplochromis_burtoni
ENSPLAG00000020627	zgc:101559	100	74.576	ENSHCOG00000009133	zgc:101559	100	76.050	Hippocampus_comes
ENSPLAG00000020627	zgc:101559	91	72.558	ENSIPUG00000022394	zgc:101559	93	72.558	Ictalurus_punctatus
ENSPLAG00000020627	zgc:101559	100	82.979	ENSKMAG00000002862	zgc:101559	100	82.979	Kryptolebias_marmoratus
ENSPLAG00000020627	zgc:101559	100	83.761	ENSLBEG00000025798	zgc:101559	100	83.761	Labrus_bergylta
ENSPLAG00000020627	zgc:101559	86	65.672	ENSLACG00000011557	zgc:101559	87	65.672	Latimeria_chalumnae
ENSPLAG00000020627	zgc:101559	100	70.085	ENSLOCG00000005904	zgc:101559	99	70.085	Lepisosteus_oculatus
ENSPLAG00000020627	zgc:101559	100	83.761	ENSMAMG00000017431	zgc:101559	100	83.761	Mastacembelus_armatus
ENSPLAG00000020627	zgc:101559	100	85.043	ENSMZEG00005021778	zgc:101559	100	85.043	Maylandia_zebra
ENSPLAG00000020627	zgc:101559	100	81.197	ENSMMOG00000019779	zgc:101559	100	81.197	Mola_mola
ENSPLAG00000020627	zgc:101559	100	80.342	ENSMALG00000003712	zgc:101559	100	80.342	Monopterus_albus
ENSPLAG00000020627	zgc:101559	100	84.188	ENSNBRG00000002684	zgc:101559	100	84.188	Neolamprologus_brichardi
ENSPLAG00000020627	zgc:101559	100	85.043	ENSONIG00000006715	-	100	85.043	Oreochromis_niloticus
ENSPLAG00000020627	zgc:101559	100	83.333	ENSORLG00000030642	zgc:101559	100	83.333	Oryzias_latipes
ENSPLAG00000020627	zgc:101559	100	82.479	ENSORLG00020012685	zgc:101559	100	82.479	Oryzias_latipes_hni
ENSPLAG00000020627	zgc:101559	100	82.906	ENSORLG00015016047	zgc:101559	100	82.906	Oryzias_latipes_hsok
ENSPLAG00000020627	zgc:101559	100	85.043	ENSOMEG00000013128	zgc:101559	100	85.043	Oryzias_melastigma
ENSPLAG00000020627	zgc:101559	88	74.146	ENSPKIG00000013397	zgc:101559	86	74.146	Paramormyrops_kingsleyae
ENSPLAG00000020627	zgc:101559	100	99.573	ENSPFOG00000009101	-	100	99.573	Poecilia_formosa
ENSPLAG00000020627	zgc:101559	100	98.291	ENSPMEG00000010152	zgc:101559	100	98.291	Poecilia_mexicana
ENSPLAG00000020627	zgc:101559	100	97.009	ENSPREG00000007017	zgc:101559	100	97.009	Poecilia_reticulata
ENSPLAG00000020627	zgc:101559	100	85.043	ENSPNYG00000012922	zgc:101559	100	85.043	Pundamilia_nyererei
ENSPLAG00000020627	zgc:101559	99	74.138	ENSPNAG00000017856	zgc:101559	100	74.138	Pygocentrus_nattereri
ENSPLAG00000020627	zgc:101559	88	75.481	ENSSFOG00015006175	zgc:101559	89	75.481	Scleropages_formosus
ENSPLAG00000020627	zgc:101559	99	81.545	ENSSMAG00000002229	zgc:101559	99	81.545	Scophthalmus_maximus
ENSPLAG00000020627	zgc:101559	100	87.179	ENSSDUG00000008151	zgc:101559	100	87.179	Seriola_dumerili
ENSPLAG00000020627	zgc:101559	100	87.179	ENSSLDG00000019214	zgc:101559	100	87.179	Seriola_lalandi_dorsalis
ENSPLAG00000020627	zgc:101559	100	86.325	ENSSPAG00000006404	zgc:101559	100	86.325	Stegastes_partitus
ENSPLAG00000020627	zgc:101559	100	82.479	ENSTRUG00000009903	zgc:101559	100	82.479	Takifugu_rubripes
ENSPLAG00000020627	zgc:101559	93	81.651	ENSTNIG00000015000	zgc:101559	93	81.279	Tetraodon_nigroviridis
ENSPLAG00000020627	zgc:101559	100	95.726	ENSXCOG00000018683	zgc:101559	100	95.726	Xiphophorus_couchianus
ENSPLAG00000020627	zgc:101559	100	95.726	ENSXMAG00000011171	zgc:101559	100	95.726	Xiphophorus_maculatus