EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000020643 (Gene tree)
Gene ID: 106953400
Gene Symbol: zgc:162879
Alias: -
Full Name: ras and EF-hand domain-containing protein-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 11509 bases
Position: chrKQ545893.1:238161-249669
Accession: 106953400
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000029994	MMR_HSR1	PF01926.23	4.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000025450	-	3055	XM_015042134	ENSPLAP00000029994	663 (aa)	XP_014897620	UPI00072DCD81

Gene Model

Click here to download ENSPLAG00000020643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000020643's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000020643	zgc:162879	80	34.982	ENSPLAG00000022907	RASEF	93	34.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000020643	zgc:162879	98	73.708	ENSAPOG00000008539	zgc:162879	99	73.708	Acanthochromis_polyacanthus
ENSPLAG00000020643	zgc:162879	99	74.018	ENSACIG00000023717	zgc:162879	100	74.018	Amphilophus_citrinellus
ENSPLAG00000020643	zgc:162879	84	69.449	ENSAOCG00000006210	zgc:162879	87	69.449	Amphiprion_ocellaris
ENSPLAG00000020643	zgc:162879	98	73.860	ENSAPEG00000017489	zgc:162879	99	73.860	Amphiprion_percula
ENSPLAG00000020643	zgc:162879	99	74.849	ENSATEG00000006102	zgc:162879	100	74.849	Anabas_testudineus
ENSPLAG00000020643	zgc:162879	99	70.934	ENSACLG00000021066	zgc:162879	100	70.000	Astatotilapia_calliptera
ENSPLAG00000020643	zgc:162879	99	58.569	ENSAMXG00000007430	zgc:162879	100	58.631	Astyanax_mexicanus
ENSPLAG00000020643	zgc:162879	84	56.351	ENSCSEG00000013699	zgc:162879	91	56.351	Cynoglossus_semilaevis
ENSPLAG00000020643	zgc:162879	98	79.173	ENSCVAG00000014510	zgc:162879	99	79.173	Cyprinodon_variegatus
ENSPLAG00000020643	zgc:162879	99	58.258	ENSDARG00000074163	zgc:162879	100	58.258	Danio_rerio
ENSPLAG00000020643	zgc:162879	89	59.308	ENSELUG00000019483	zgc:162879	97	59.143	Esox_lucius
ENSPLAG00000020643	zgc:162879	76	75.746	ENSFHEG00000022549	zgc:162879	100	75.547	Fundulus_heteroclitus
ENSPLAG00000020643	zgc:162879	99	92.683	ENSGAFG00000001313	zgc:162879	100	92.683	Gambusia_affinis
ENSPLAG00000020643	zgc:162879	98	66.910	ENSGACG00000010798	zgc:162879	98	67.103	Gasterosteus_aculeatus
ENSPLAG00000020643	zgc:162879	99	70.934	ENSHBUG00000016335	zgc:162879	100	70.934	Haplochromis_burtoni
ENSPLAG00000020643	zgc:162879	99	45.946	ENSHCOG00000012026	zgc:162879	99	54.967	Hippocampus_comes
ENSPLAG00000020643	zgc:162879	99	65.909	ENSKMAG00000016246	zgc:162879	100	66.212	Kryptolebias_marmoratus
ENSPLAG00000020643	zgc:162879	99	69.578	ENSLBEG00000006690	zgc:162879	100	69.578	Labrus_bergylta
ENSPLAG00000020643	zgc:162879	98	42.161	ENSLACG00000014082	-	98	42.292	Latimeria_chalumnae
ENSPLAG00000020643	zgc:162879	99	55.015	ENSLOCG00000014347	zgc:162879	99	55.015	Lepisosteus_oculatus
ENSPLAG00000020643	zgc:162879	99	68.986	ENSMAMG00000008875	zgc:162879	100	68.986	Mastacembelus_armatus
ENSPLAG00000020643	zgc:162879	99	70.739	ENSMZEG00005022256	zgc:162879	100	70.739	Maylandia_zebra
ENSPLAG00000020643	zgc:162879	99	62.840	ENSNBRG00000020110	zgc:162879	100	62.840	Neolamprologus_brichardi
ENSPLAG00000020643	zgc:162879	98	68.286	ENSONIG00000015165	zgc:162879	100	68.286	Oreochromis_niloticus
ENSPLAG00000020643	zgc:162879	99	63.678	ENSORLG00015017960	zgc:162879	99	63.678	Oryzias_latipes_hsok
ENSPLAG00000020643	zgc:162879	99	53.272	ENSPKIG00000020661	zgc:162879	100	54.573	Paramormyrops_kingsleyae
ENSPLAG00000020643	zgc:162879	100	98.341	ENSPFOG00000006354	zgc:162879	100	98.341	Poecilia_formosa
ENSPLAG00000020643	zgc:162879	100	97.134	ENSPMEG00000014713	zgc:162879	100	97.134	Poecilia_mexicana
ENSPLAG00000020643	zgc:162879	99	64.242	ENSPNYG00000010530	zgc:162879	100	64.242	Pundamilia_nyererei
ENSPLAG00000020643	zgc:162879	99	57.801	ENSPNAG00000012022	zgc:162879	100	57.801	Pygocentrus_nattereri
ENSPLAG00000020643	zgc:162879	87	48.007	ENSSFOG00015023774	zgc:162879	95	47.841	Scleropages_formosus
ENSPLAG00000020643	zgc:162879	99	69.637	ENSSMAG00000001513	zgc:162879	99	70.701	Scophthalmus_maximus
ENSPLAG00000020643	zgc:162879	99	74.548	ENSSDUG00000011478	zgc:162879	100	74.548	Seriola_dumerili
ENSPLAG00000020643	zgc:162879	99	74.398	ENSSLDG00000000877	zgc:162879	100	74.398	Seriola_lalandi_dorsalis
ENSPLAG00000020643	zgc:162879	98	67.530	ENSSPAG00000010598	zgc:162879	99	67.530	Stegastes_partitus
ENSPLAG00000020643	zgc:162879	98	63.195	ENSTNIG00000019239	zgc:162879	99	63.195	Tetraodon_nigroviridis
ENSPLAG00000020643	zgc:162879	98	39.167	ENSXETG00000015491	rasef	98	38.472	Xenopus_tropicalis
ENSPLAG00000020643	zgc:162879	76	83.730	ENSXCOG00000020244	zgc:162879	100	83.730	Xiphophorus_couchianus
ENSPLAG00000020643	zgc:162879	99	92.530	ENSXMAG00000002846	zgc:162879	100	92.530	Xiphophorus_maculatus