EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000020777 (Gene tree)
Gene ID: 106948065
Gene Symbol: prpf8
Alias: -
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 14351 bases
Position: chrKQ545585.1:612615-626965
Accession: 106948065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000029997	RRM_4	PF10598.9	3e-48	1	1
ENSPLAP00000029997	U5_2-snRNA_bdg	PF10597.9	6.9e-74	1	1
ENSPLAP00000029997	PRO8NT	PF08082.11	8e-88	1	1
ENSPLAP00000029997	U6-snRNA_bdg	PF10596.9	1.7e-89	1	1
ENSPLAP00000029997	PROCN	PF08083.11	2.4e-206	1	1
ENSPLAP00000029997	PRP8_domainIV	PF12134.8	4.1e-130	1	1
ENSPLAP00000029997	PROCT	PF08084.11	2.6e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000025468	-	6972	XM_015033513	ENSPLAP00000029997	2323 (aa)	XP_014888999	-

Gene Model

Click here to download ENSPLAG00000020777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000020777's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000020777	prpf8	100	96.403	ENSG00000174231	PRPF8	100	96.403	Homo_sapiens
ENSPLAG00000020777	prpf8	100	97.605	ENSAPOG00000010079	prpf8	100	97.605	Acanthochromis_polyacanthus
ENSPLAG00000020777	prpf8	100	96.403	ENSAMEG00000007940	PRPF8	100	96.403	Ailuropoda_melanoleuca
ENSPLAG00000020777	prpf8	100	95.499	ENSACIG00000018280	prpf8	100	95.499	Amphilophus_citrinellus
ENSPLAG00000020777	prpf8	100	97.562	ENSAOCG00000010725	prpf8	100	97.562	Amphiprion_ocellaris
ENSPLAG00000020777	prpf8	100	97.562	ENSAPEG00000014397	prpf8	100	97.562	Amphiprion_percula
ENSPLAG00000020777	prpf8	100	97.006	ENSATEG00000010062	prpf8	100	97.006	Anabas_testudineus
ENSPLAG00000020777	prpf8	96	96.619	ENSAPLG00000010357	PRPF8	100	96.619	Anas_platyrhynchos
ENSPLAG00000020777	prpf8	82	95.156	ENSACAG00000014784	PRPF8	99	95.156	Anolis_carolinensis
ENSPLAG00000020777	prpf8	100	96.403	ENSANAG00000032629	PRPF8	100	96.403	Aotus_nancymaae
ENSPLAG00000020777	prpf8	100	96.894	ENSACLG00000020858	prpf8	100	96.894	Astatotilapia_calliptera
ENSPLAG00000020777	prpf8	100	97.342	ENSAMXG00000020291	prpf8	100	97.342	Astyanax_mexicanus
ENSPLAG00000020777	prpf8	100	96.403	ENSBTAG00000011488	PRPF8	100	96.403	Bos_taurus
ENSPLAG00000020777	prpf8	99	85.028	WBGene00004187	prp-8	99	85.597	Caenorhabditis_elegans
ENSPLAG00000020777	prpf8	100	96.403	ENSCJAG00000001911	PRPF8	100	96.403	Callithrix_jacchus
ENSPLAG00000020777	prpf8	100	96.403	ENSCAFG00000019221	PRPF8	100	96.403	Canis_familiaris
ENSPLAG00000020777	prpf8	96	96.698	ENSCAFG00020009943	PRPF8	100	96.698	Canis_lupus_dingo
ENSPLAG00000020777	prpf8	100	96.403	ENSCHIG00000017499	PRPF8	100	96.403	Capra_hircus
ENSPLAG00000020777	prpf8	100	96.403	ENSTSYG00000014120	PRPF8	100	96.403	Carlito_syrichta
ENSPLAG00000020777	prpf8	96	94.477	ENSCAPG00000009459	PRPF8	99	94.477	Cavia_aperea
ENSPLAG00000020777	prpf8	100	96.403	ENSCPOG00000010379	PRPF8	100	96.403	Cavia_porcellus
ENSPLAG00000020777	prpf8	100	96.403	ENSCCAG00000031983	-	100	96.403	Cebus_capucinus
ENSPLAG00000020777	prpf8	100	96.403	ENSCATG00000038595	PRPF8	100	96.403	Cercocebus_atys
ENSPLAG00000020777	prpf8	100	96.403	ENSCLAG00000004388	PRPF8	100	96.403	Chinchilla_lanigera
ENSPLAG00000020777	prpf8	100	96.403	ENSCSAG00000013929	PRPF8	100	96.403	Chlorocebus_sabaeus
ENSPLAG00000020777	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSPLAG00000020777	prpf8	100	96.403	ENSCPBG00000020409	PRPF8	100	96.403	Chrysemys_picta_bellii
ENSPLAG00000020777	prpf8	99	91.492	ENSCSAVG00000007825	-	100	90.929	Ciona_savignyi
ENSPLAG00000020777	prpf8	100	96.403	ENSCANG00000043088	PRPF8	100	96.403	Colobus_angolensis_palliatus
ENSPLAG00000020777	prpf8	74	99.409	ENSCGRG00000005129	Prpf8	100	99.409	Cricetulus_griseus_crigri
ENSPLAG00000020777	prpf8	100	97.307	ENSCSEG00000007905	prpf8	100	97.307	Cynoglossus_semilaevis
ENSPLAG00000020777	prpf8	100	97.011	ENSDARG00000026180	prpf8	100	97.011	Danio_rerio
ENSPLAG00000020777	prpf8	93	96.547	ENSDNOG00000018471	PRPF8	99	96.547	Dasypus_novemcinctus
ENSPLAG00000020777	prpf8	83	94.393	ENSDORG00000006185	Prpf8	96	94.322	Dipodomys_ordii
ENSPLAG00000020777	prpf8	99	90.141	FBgn0033688	Prp8	97	90.540	Drosophila_melanogaster
ENSPLAG00000020777	prpf8	100	91.006	ENSETEG00000017592	PRPF8	100	91.006	Echinops_telfairi
ENSPLAG00000020777	prpf8	99	92.172	ENSEBUG00000006548	prpf8	99	92.172	Eptatretus_burgeri
ENSPLAG00000020777	prpf8	100	96.403	ENSEASG00005009514	PRPF8	100	96.403	Equus_asinus_asinus
ENSPLAG00000020777	prpf8	98	96.747	ENSECAG00000021318	PRPF8	100	96.747	Equus_caballus
ENSPLAG00000020777	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSPLAG00000020777	prpf8	98	95.979	ENSELUG00000007120	prpf8	99	95.979	Esox_lucius
ENSPLAG00000020777	prpf8	100	96.403	ENSFCAG00000006297	PRPF8	100	96.403	Felis_catus
ENSPLAG00000020777	prpf8	100	96.488	ENSFALG00000006628	PRPF8	100	96.488	Ficedula_albicollis
ENSPLAG00000020777	prpf8	100	96.403	ENSFDAG00000004711	PRPF8	100	96.403	Fukomys_damarensis
ENSPLAG00000020777	prpf8	100	97.438	ENSFHEG00000021084	prpf8	100	97.438	Fundulus_heteroclitus
ENSPLAG00000020777	prpf8	100	94.924	ENSGMOG00000002028	prpf8	99	94.924	Gadus_morhua
ENSPLAG00000020777	prpf8	100	96.488	ENSGALG00000002943	PRPF8	100	96.488	Gallus_gallus
ENSPLAG00000020777	prpf8	99	98.069	ENSGAFG00000010337	prpf8	99	98.069	Gambusia_affinis
ENSPLAG00000020777	prpf8	100	97.386	ENSGACG00000008504	prpf8	100	97.386	Gasterosteus_aculeatus
ENSPLAG00000020777	prpf8	100	96.403	ENSGAGG00000008350	PRPF8	100	96.403	Gopherus_agassizii
ENSPLAG00000020777	prpf8	100	96.403	ENSGGOG00000005516	PRPF8	100	96.403	Gorilla_gorilla
ENSPLAG00000020777	prpf8	100	97.300	ENSHBUG00000016192	prpf8	100	97.300	Haplochromis_burtoni
ENSPLAG00000020777	prpf8	100	96.403	ENSHGLG00000012029	PRPF8	100	96.403	Heterocephalus_glaber_female
ENSPLAG00000020777	prpf8	100	96.403	ENSHGLG00100016494	PRPF8	100	96.403	Heterocephalus_glaber_male
ENSPLAG00000020777	prpf8	100	97.136	ENSHCOG00000016414	prpf8	100	97.136	Hippocampus_comes
ENSPLAG00000020777	prpf8	100	97.092	ENSIPUG00000023230	prpf8	100	97.092	Ictalurus_punctatus
ENSPLAG00000020777	prpf8	100	96.403	ENSSTOG00000005128	PRPF8	100	96.403	Ictidomys_tridecemlineatus
ENSPLAG00000020777	prpf8	100	94.261	ENSJJAG00000021159	Prpf8	100	94.218	Jaculus_jaculus
ENSPLAG00000020777	prpf8	99	97.553	ENSKMAG00000016118	prpf8	99	97.553	Kryptolebias_marmoratus
ENSPLAG00000020777	prpf8	100	97.305	ENSLBEG00000026903	prpf8	100	97.305	Labrus_bergylta
ENSPLAG00000020777	prpf8	95	94.354	ENSLACG00000010479	PRPF8	99	96.763	Latimeria_chalumnae
ENSPLAG00000020777	prpf8	99	97.088	ENSLOCG00000005409	prpf8	99	97.088	Lepisosteus_oculatus
ENSPLAG00000020777	prpf8	100	96.403	ENSLAFG00000015445	PRPF8	100	96.403	Loxodonta_africana
ENSPLAG00000020777	prpf8	100	96.403	ENSMFAG00000039995	PRPF8	100	96.403	Macaca_fascicularis
ENSPLAG00000020777	prpf8	100	96.403	ENSMMUG00000004820	PRPF8	100	96.403	Macaca_mulatta
ENSPLAG00000020777	prpf8	100	96.403	ENSMNEG00000035713	PRPF8	100	96.403	Macaca_nemestrina
ENSPLAG00000020777	prpf8	100	96.403	ENSMLEG00000037937	PRPF8	100	96.403	Mandrillus_leucophaeus
ENSPLAG00000020777	prpf8	100	97.562	ENSMAMG00000008919	prpf8	100	97.562	Mastacembelus_armatus
ENSPLAG00000020777	prpf8	100	96.894	ENSMZEG00005015073	prpf8	100	96.894	Maylandia_zebra
ENSPLAG00000020777	prpf8	100	96.488	ENSMGAG00000004769	PRPF8	100	96.488	Meleagris_gallopavo
ENSPLAG00000020777	prpf8	100	96.403	ENSMICG00000010320	PRPF8	100	96.403	Microcebus_murinus
ENSPLAG00000020777	prpf8	100	96.403	ENSMOCG00000016838	Prpf8	100	96.403	Microtus_ochrogaster
ENSPLAG00000020777	prpf8	100	97.006	ENSMMOG00000011887	prpf8	100	97.006	Mola_mola
ENSPLAG00000020777	prpf8	100	96.317	ENSMODG00000010480	PRPF8	100	96.317	Monodelphis_domestica
ENSPLAG00000020777	prpf8	97	98.536	ENSMALG00000003558	prpf8	100	98.536	Monopterus_albus
ENSPLAG00000020777	prpf8	100	96.360	MGP_CAROLIEiJ_G0016740	Prpf8	100	96.360	Mus_caroli
ENSPLAG00000020777	prpf8	100	96.360	ENSMUSG00000020850	Prpf8	100	96.360	Mus_musculus
ENSPLAG00000020777	prpf8	100	96.317	MGP_PahariEiJ_G0017877	Prpf8	100	96.317	Mus_pahari
ENSPLAG00000020777	prpf8	100	96.360	MGP_SPRETEiJ_G0017583	Prpf8	100	96.360	Mus_spretus
ENSPLAG00000020777	prpf8	100	96.403	ENSMPUG00000013227	PRPF8	100	96.403	Mustela_putorius_furo
ENSPLAG00000020777	prpf8	100	96.279	ENSMLUG00000002666	PRPF8	100	96.279	Myotis_lucifugus
ENSPLAG00000020777	prpf8	100	94.647	ENSNGAG00000005305	Prpf8	100	94.604	Nannospalax_galili
ENSPLAG00000020777	prpf8	100	96.936	ENSNBRG00000013127	prpf8	100	96.936	Neolamprologus_brichardi
ENSPLAG00000020777	prpf8	97	96.756	ENSNLEG00000000897	PRPF8	98	96.756	Nomascus_leucogenys
ENSPLAG00000020777	prpf8	99	94.872	ENSMEUG00000015999	PRPF8	100	94.872	Notamacropus_eugenii
ENSPLAG00000020777	prpf8	100	94.904	ENSOPRG00000003102	PRPF8	100	94.861	Ochotona_princeps
ENSPLAG00000020777	prpf8	100	96.403	ENSODEG00000008468	PRPF8	100	96.403	Octodon_degus
ENSPLAG00000020777	prpf8	100	96.894	ENSONIG00000008153	prpf8	100	96.894	Oreochromis_niloticus
ENSPLAG00000020777	prpf8	82	99.065	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSPLAG00000020777	prpf8	100	96.403	ENSOCUG00000000081	PRPF8	100	96.403	Oryctolagus_cuniculus
ENSPLAG00000020777	prpf8	100	96.729	ENSORLG00000008036	prpf8	100	96.729	Oryzias_latipes
ENSPLAG00000020777	prpf8	100	96.688	ENSORLG00020021070	prpf8	100	96.688	Oryzias_latipes_hni
ENSPLAG00000020777	prpf8	100	96.729	ENSORLG00015002340	prpf8	100	96.729	Oryzias_latipes_hsok
ENSPLAG00000020777	prpf8	99	96.066	ENSOMEG00000016866	prpf8	98	96.109	Oryzias_melastigma
ENSPLAG00000020777	prpf8	100	96.279	ENSOARG00000013312	PRPF8	100	96.279	Ovis_aries
ENSPLAG00000020777	prpf8	100	96.403	ENSPPAG00000042753	PRPF8	100	96.403	Pan_paniscus
ENSPLAG00000020777	prpf8	100	96.403	ENSPPRG00000008746	PRPF8	100	96.403	Panthera_pardus
ENSPLAG00000020777	prpf8	100	96.317	ENSPTIG00000019200	PRPF8	100	96.317	Panthera_tigris_altaica
ENSPLAG00000020777	prpf8	100	96.403	ENSPTRG00000039576	PRPF8	100	96.403	Pan_troglodytes
ENSPLAG00000020777	prpf8	99	96.785	ENSPANG00000024607	PRPF8	98	96.785	Papio_anubis
ENSPLAG00000020777	prpf8	100	96.846	ENSPKIG00000011201	prpf8	100	96.846	Paramormyrops_kingsleyae
ENSPLAG00000020777	prpf8	100	96.360	ENSPSIG00000013393	PRPF8	100	96.360	Pelodiscus_sinensis
ENSPLAG00000020777	prpf8	100	96.403	ENSPEMG00000021699	Prpf8	100	96.403	Peromyscus_maniculatus_bairdii
ENSPLAG00000020777	prpf8	96	92.339	ENSPMAG00000005438	prpf8	100	92.383	Petromyzon_marinus
ENSPLAG00000020777	prpf8	100	96.317	ENSPCIG00000022603	PRPF8	100	96.609	Phascolarctos_cinereus
ENSPLAG00000020777	prpf8	100	97.498	ENSPFOG00000007005	prpf8	100	97.498	Poecilia_formosa
ENSPLAG00000020777	prpf8	100	100.000	ENSPMEG00000004051	prpf8	100	100.000	Poecilia_mexicana
ENSPLAG00000020777	prpf8	100	98.371	ENSPREG00000021902	prpf8	100	98.371	Poecilia_reticulata
ENSPLAG00000020777	prpf8	100	96.403	ENSPPYG00000007777	PRPF8	100	96.403	Pongo_abelii
ENSPLAG00000020777	prpf8	90	96.287	ENSPCAG00000008938	PRPF8	90	96.287	Procavia_capensis
ENSPLAG00000020777	prpf8	100	96.403	ENSPCOG00000015182	PRPF8	100	96.403	Propithecus_coquereli
ENSPLAG00000020777	prpf8	93	96.785	ENSPVAG00000002134	PRPF8	93	96.785	Pteropus_vampyrus
ENSPLAG00000020777	prpf8	100	97.300	ENSPNYG00000016356	prpf8	100	97.300	Pundamilia_nyererei
ENSPLAG00000020777	prpf8	100	97.220	ENSPNAG00000009247	prpf8	100	97.220	Pygocentrus_nattereri
ENSPLAG00000020777	prpf8	100	96.360	ENSRNOG00000003495	Prpf8	100	96.360	Rattus_norvegicus
ENSPLAG00000020777	prpf8	100	96.403	ENSRBIG00000031219	PRPF8	100	96.403	Rhinopithecus_bieti
ENSPLAG00000020777	prpf8	100	96.403	ENSRROG00000038014	PRPF8	100	96.403	Rhinopithecus_roxellana
ENSPLAG00000020777	prpf8	99	61.482	YHR165C	PRP8	95	61.525	Saccharomyces_cerevisiae
ENSPLAG00000020777	prpf8	100	96.403	ENSSBOG00000029717	PRPF8	100	96.403	Saimiri_boliviensis_boliviensis
ENSPLAG00000020777	prpf8	100	96.274	ENSSHAG00000006167	PRPF8	100	96.274	Sarcophilus_harrisii
ENSPLAG00000020777	prpf8	100	97.096	ENSSFOG00015013905	prpf8	100	97.096	Scleropages_formosus
ENSPLAG00000020777	prpf8	100	97.134	ENSSMAG00000017736	prpf8	100	97.134	Scophthalmus_maximus
ENSPLAG00000020777	prpf8	100	97.519	ENSSDUG00000003029	prpf8	100	97.519	Seriola_dumerili
ENSPLAG00000020777	prpf8	69	99.687	ENSSLDG00000017096	prpf8	100	99.687	Seriola_lalandi_dorsalis
ENSPLAG00000020777	prpf8	87	94.336	ENSSARG00000002892	PRPF8	87	94.336	Sorex_araneus
ENSPLAG00000020777	prpf8	100	96.317	ENSSPUG00000007463	PRPF8	100	96.317	Sphenodon_punctatus
ENSPLAG00000020777	prpf8	100	97.006	ENSSPAG00000015639	prpf8	100	97.006	Stegastes_partitus
ENSPLAG00000020777	prpf8	100	96.403	ENSSSCG00000017817	PRPF8	100	96.403	Sus_scrofa
ENSPLAG00000020777	prpf8	51	98.604	ENSTGUG00000015597	-	95	98.604	Taeniopygia_guttata
ENSPLAG00000020777	prpf8	100	96.488	ENSTGUG00000005648	-	100	96.488	Taeniopygia_guttata
ENSPLAG00000020777	prpf8	100	96.963	ENSTRUG00000015906	prpf8	100	96.963	Takifugu_rubripes
ENSPLAG00000020777	prpf8	95	99.343	ENSTNIG00000003460	prpf8	99	99.343	Tetraodon_nigroviridis
ENSPLAG00000020777	prpf8	93	96.732	ENSTBEG00000006431	PRPF8	93	96.732	Tupaia_belangeri
ENSPLAG00000020777	prpf8	100	95.803	ENSTTRG00000006869	PRPF8	100	95.760	Tursiops_truncatus
ENSPLAG00000020777	prpf8	54	94.281	ENSUAMG00000015644	-	96	93.686	Ursus_americanus
ENSPLAG00000020777	prpf8	100	96.481	ENSUMAG00000009385	PRPF8	100	96.481	Ursus_maritimus
ENSPLAG00000020777	prpf8	71	97.561	ENSVPAG00000006063	-	71	97.561	Vicugna_pacos
ENSPLAG00000020777	prpf8	100	96.403	ENSVVUG00000021695	PRPF8	99	96.403	Vulpes_vulpes
ENSPLAG00000020777	prpf8	100	96.190	ENSXETG00000022259	prpf8	100	96.190	Xenopus_tropicalis
ENSPLAG00000020777	prpf8	100	97.992	ENSXCOG00000012775	prpf8	100	97.992	Xiphophorus_couchianus
ENSPLAG00000020777	prpf8	100	97.950	ENSXMAG00000008505	prpf8	100	97.950	Xiphophorus_maculatus