EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000020793 (Gene tree)
Gene ID: 106938713
Gene Symbol: raver1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 10510 bases
Position: chrKQ545398.1:564516-575025
Accession: 106938713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000016572	RRM_1	PF00076.22	1.5e-29	1	2
ENSPLAP00000016572	RRM_1	PF00076.22	1.5e-29	2	2
ENSPLAP00000016556	RRM_1	PF00076.22	1.8e-29	1	2
ENSPLAP00000016556	RRM_1	PF00076.22	1.8e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000031106	-	4101	XM_015020850	ENSPLAP00000016572	701 (aa)	XP_014876336	-
ENSPLAT00000025544	-	2190	-	ENSPLAP00000016556	729 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000020793's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000020793's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000020793	raver1	76	80.000	ENSG00000161847	RAVER1	73	80.000	Homo_sapiens
ENSPLAG00000020793	raver1	97	80.495	ENSAPOG00000017267	raver1	88	80.143	Acanthochromis_polyacanthus
ENSPLAG00000020793	raver1	63	65.482	ENSAMEG00000011738	RAVER1	59	66.396	Ailuropoda_melanoleuca
ENSPLAG00000020793	raver1	97	81.341	ENSAOCG00000005128	raver1	92	80.973	Amphiprion_ocellaris
ENSPLAG00000020793	raver1	97	81.195	ENSAPEG00000010854	raver1	95	80.830	Amphiprion_percula
ENSPLAG00000020793	raver1	97	78.134	ENSATEG00000021004	raver1	95	77.825	Anabas_testudineus
ENSPLAG00000020793	raver1	69	55.642	ENSACAG00000008386	-	79	54.495	Anolis_carolinensis
ENSPLAG00000020793	raver1	76	80.000	ENSANAG00000028226	RAVER1	54	80.000	Aotus_nancymaae
ENSPLAG00000020793	raver1	99	78.490	ENSACLG00000018492	raver1	100	72.283	Astatotilapia_calliptera
ENSPLAG00000020793	raver1	97	64.095	ENSAMXG00000005132	raver1	100	62.158	Astyanax_mexicanus
ENSPLAG00000020793	raver1	78	68.684	ENSBTAG00000015721	RAVER1	97	49.725	Bos_taurus
ENSPLAG00000020793	raver1	76	80.000	ENSCJAG00000005671	RAVER1	72	80.000	Callithrix_jacchus
ENSPLAG00000020793	raver1	63	68.571	ENSCAFG00000017861	RAVER1	62	69.722	Canis_familiaris
ENSPLAG00000020793	raver1	63	68.571	ENSCAFG00020024449	RAVER1	63	69.722	Canis_lupus_dingo
ENSPLAG00000020793	raver1	62	68.421	ENSCHIG00000006718	RAVER1	67	67.076	Capra_hircus
ENSPLAG00000020793	raver1	56	71.045	ENSTSYG00000027107	RAVER1	64	72.581	Carlito_syrichta
ENSPLAG00000020793	raver1	50	68.451	ENSCAPG00000002269	RAVER1	53	80.000	Cavia_aperea
ENSPLAG00000020793	raver1	54	80.000	ENSCPOG00000001008	RAVER1	55	80.000	Cavia_porcellus
ENSPLAG00000020793	raver1	76	80.000	ENSCCAG00000031723	RAVER1	95	49.458	Cebus_capucinus
ENSPLAG00000020793	raver1	75	83.333	ENSCATG00000043863	RAVER1	72	80.000	Cercocebus_atys
ENSPLAG00000020793	raver1	78	57.769	ENSCLAG00000009336	RAVER1	60	70.520	Chinchilla_lanigera
ENSPLAG00000020793	raver1	76	80.000	ENSCSAG00000007317	RAVER1	61	80.000	Chlorocebus_sabaeus
ENSPLAG00000020793	raver1	92	49.933	ENSCPBG00000005349	-	97	49.597	Chrysemys_picta_bellii
ENSPLAG00000020793	raver1	74	83.333	ENSCANG00000008337	RAVER1	69	83.333	Colobus_angolensis_palliatus
ENSPLAG00000020793	raver1	79	56.805	ENSCGRG00001013260	-	100	48.031	Cricetulus_griseus_chok1gshd
ENSPLAG00000020793	raver1	79	56.805	ENSCGRG00000015138	-	100	48.031	Cricetulus_griseus_crigri
ENSPLAG00000020793	raver1	96	72.247	ENSCSEG00000021092	raver1	100	67.414	Cynoglossus_semilaevis
ENSPLAG00000020793	raver1	99	84.120	ENSCVAG00000013971	raver1	95	84.120	Cyprinodon_variegatus
ENSPLAG00000020793	raver1	97	64.620	ENSDARG00000052617	raver1	89	73.103	Danio_rerio
ENSPLAG00000020793	raver1	52	78.000	ENSDNOG00000035742	-	53	78.000	Dasypus_novemcinctus
ENSPLAG00000020793	raver1	57	80.000	ENSDORG00000010106	-	57	80.000	Dipodomys_ordii
ENSPLAG00000020793	raver1	55	67.866	ENSEASG00005010544	-	70	67.866	Equus_asinus_asinus
ENSPLAG00000020793	raver1	64	67.436	ENSECAG00000024966	RAVER1	78	55.620	Equus_caballus
ENSPLAG00000020793	raver1	95	71.171	ENSELUG00000023287	raver1	100	66.403	Esox_lucius
ENSPLAG00000020793	raver1	63	68.312	ENSFCAG00000009435	RAVER1	66	66.990	Felis_catus
ENSPLAG00000020793	raver1	54	80.000	ENSFDAG00000015113	RAVER1	55	80.000	Fukomys_damarensis
ENSPLAG00000020793	raver1	93	65.886	ENSGMOG00000003649	raver1	94	66.032	Gadus_morhua
ENSPLAG00000020793	raver1	67	39.337	ENSGALG00000050608	-	50	38.716	Gallus_gallus
ENSPLAG00000020793	raver1	99	91.117	ENSGAFG00000015944	raver1	95	91.117	Gambusia_affinis
ENSPLAG00000020793	raver1	92	67.878	ENSGACG00000013818	raver1	93	69.913	Gasterosteus_aculeatus
ENSPLAG00000020793	raver1	91	50.548	ENSGAGG00000011748	-	99	49.728	Gopherus_agassizii
ENSPLAG00000020793	raver1	77	73.214	ENSGGOG00000006015	RAVER1	78	55.534	Gorilla_gorilla
ENSPLAG00000020793	raver1	99	78.490	ENSHBUG00000021210	raver1	100	72.283	Haplochromis_burtoni
ENSPLAG00000020793	raver1	57	71.221	ENSHGLG00000015460	RAVER1	79	55.490	Heterocephalus_glaber_female
ENSPLAG00000020793	raver1	57	71.221	ENSHGLG00100000812	RAVER1	79	55.490	Heterocephalus_glaber_male
ENSPLAG00000020793	raver1	99	70.959	ENSHCOG00000000449	raver1	93	70.959	Hippocampus_comes
ENSPLAG00000020793	raver1	97	64.766	ENSIPUG00000013153	raver1	100	61.222	Ictalurus_punctatus
ENSPLAG00000020793	raver1	76	80.000	ENSSTOG00000003241	RAVER1	55	80.000	Ictidomys_tridecemlineatus
ENSPLAG00000020793	raver1	82	55.932	ENSJJAG00000018219	-	75	64.270	Jaculus_jaculus
ENSPLAG00000020793	raver1	99	76.286	ENSKMAG00000017355	raver1	95	76.286	Kryptolebias_marmoratus
ENSPLAG00000020793	raver1	97	79.442	ENSLBEG00000008268	raver1	96	79.442	Labrus_bergylta
ENSPLAG00000020793	raver1	85	48.867	ENSLACG00000005809	-	81	56.842	Latimeria_chalumnae
ENSPLAG00000020793	raver1	91	60.492	ENSLOCG00000007500	raver1	100	56.929	Lepisosteus_oculatus
ENSPLAG00000020793	raver1	81	56.705	ENSLAFG00000003664	-	61	80.000	Loxodonta_africana
ENSPLAG00000020793	raver1	76	83.333	ENSMFAG00000037977	RAVER1	95	48.404	Macaca_fascicularis
ENSPLAG00000020793	raver1	76	80.000	ENSMMUG00000014897	RAVER1	72	80.000	Macaca_mulatta
ENSPLAG00000020793	raver1	76	83.333	ENSMNEG00000028390	RAVER1	71	83.333	Macaca_nemestrina
ENSPLAG00000020793	raver1	75	83.333	ENSMLEG00000041959	RAVER1	72	80.000	Mandrillus_leucophaeus
ENSPLAG00000020793	raver1	97	77.843	ENSMAMG00000012059	raver1	95	77.396	Mastacembelus_armatus
ENSPLAG00000020793	raver1	99	78.490	ENSMZEG00005019002	raver1	95	78.632	Maylandia_zebra
ENSPLAG00000020793	raver1	79	56.890	ENSMAUG00000017948	-	83	55.597	Mesocricetus_auratus
ENSPLAG00000020793	raver1	92	49.652	ENSMICG00000010326	RAVER1	97	49.162	Microcebus_murinus
ENSPLAG00000020793	raver1	79	56.805	ENSMOCG00000015553	-	100	46.806	Microtus_ochrogaster
ENSPLAG00000020793	raver1	97	78.426	ENSMMOG00000012093	raver1	95	77.969	Mola_mola
ENSPLAG00000020793	raver1	91	48.811	ENSMODG00000005584	-	87	49.784	Monodelphis_domestica
ENSPLAG00000020793	raver1	99	74.000	ENSMALG00000016569	raver1	95	75.857	Monopterus_albus
ENSPLAG00000020793	raver1	83	55.046	MGP_CAROLIEiJ_G0031860	-	63	66.845	Mus_caroli
ENSPLAG00000020793	raver1	79	56.093	ENSMUSG00000010205	Raver1	63	66.578	Mus_musculus
ENSPLAG00000020793	raver1	58	69.914	MGP_PahariEiJ_G0014726	-	100	47.484	Mus_pahari
ENSPLAG00000020793	raver1	79	56.093	MGP_SPRETEiJ_G0032984	-	63	66.578	Mus_spretus
ENSPLAG00000020793	raver1	61	70.161	ENSMPUG00000006712	RAVER1	60	69.916	Mustela_putorius_furo
ENSPLAG00000020793	raver1	63	67.617	ENSMLUG00000012328	RAVER1	98	48.663	Myotis_lucifugus
ENSPLAG00000020793	raver1	78	56.024	ENSNGAG00000001260	-	69	64.792	Nannospalax_galili
ENSPLAG00000020793	raver1	99	70.085	ENSNBRG00000010139	raver1	95	69.658	Neolamprologus_brichardi
ENSPLAG00000020793	raver1	78	80.000	ENSNLEG00000012181	RAVER1	56	80.000	Nomascus_leucogenys
ENSPLAG00000020793	raver1	77	56.959	ENSMEUG00000003281	-	68	60.088	Notamacropus_eugenii
ENSPLAG00000020793	raver1	54	80.000	ENSODEG00000016260	RAVER1	55	80.000	Octodon_degus
ENSPLAG00000020793	raver1	91	76.389	ENSONIG00000001559	raver1	99	80.645	Oreochromis_niloticus
ENSPLAG00000020793	raver1	83	56.250	ENSOCUG00000020918	RAVER1	97	47.196	Oryctolagus_cuniculus
ENSPLAG00000020793	raver1	99	75.107	ENSORLG00000005458	raver1	95	75.107	Oryzias_latipes
ENSPLAG00000020793	raver1	99	75.250	ENSORLG00020004392	raver1	95	75.250	Oryzias_latipes_hni
ENSPLAG00000020793	raver1	99	75.680	ENSORLG00015017222	raver1	95	75.680	Oryzias_latipes_hsok
ENSPLAG00000020793	raver1	99	76.115	ENSOMEG00000023956	raver1	93	77.456	Oryzias_melastigma
ENSPLAG00000020793	raver1	62	68.158	ENSOGAG00000011071	RAVER1	60	69.296	Otolemur_garnettii
ENSPLAG00000020793	raver1	58	80.000	ENSOARG00000015886	RAVER1	53	80.000	Ovis_aries
ENSPLAG00000020793	raver1	76	80.000	ENSPPAG00000002611	RAVER1	72	80.000	Pan_paniscus
ENSPLAG00000020793	raver1	63	68.312	ENSPPRG00000009912	RAVER1	66	66.990	Panthera_pardus
ENSPLAG00000020793	raver1	76	80.000	ENSPTRG00000010466	RAVER1	72	80.000	Pan_troglodytes
ENSPLAG00000020793	raver1	75	83.333	ENSPANG00000004122	RAVER1	72	80.000	Papio_anubis
ENSPLAG00000020793	raver1	79	56.805	ENSPEMG00000016411	-	63	66.845	Peromyscus_maniculatus_bairdii
ENSPLAG00000020793	raver1	92	50.554	ENSPCIG00000018695	-	98	50.000	Phascolarctos_cinereus
ENSPLAG00000020793	raver1	99	96.605	ENSPFOG00000007016	raver1	95	96.605	Poecilia_formosa
ENSPLAG00000020793	raver1	99	96.705	ENSPMEG00000011220	raver1	95	96.705	Poecilia_mexicana
ENSPLAG00000020793	raver1	100	87.551	ENSPREG00000006864	raver1	100	87.551	Poecilia_reticulata
ENSPLAG00000020793	raver1	76	80.000	ENSPPYG00000010514	RAVER1	81	48.440	Pongo_abelii
ENSPLAG00000020793	raver1	62	68.421	ENSPCOG00000026605	RAVER1	59	69.577	Propithecus_coquereli
ENSPLAG00000020793	raver1	57	80.000	ENSPVAG00000003689	RAVER1	56	80.000	Pteropus_vampyrus
ENSPLAG00000020793	raver1	100	71.024	ENSPNYG00000013284	raver1	100	70.081	Pundamilia_nyererei
ENSPLAG00000020793	raver1	96	66.228	ENSPNAG00000015476	raver1	100	62.735	Pygocentrus_nattereri
ENSPLAG00000020793	raver1	79	57.002	ENSRNOG00000020710	Raver1	100	49.673	Rattus_norvegicus
ENSPLAG00000020793	raver1	76	80.000	ENSRBIG00000034702	RAVER1	71	83.333	Rhinopithecus_bieti
ENSPLAG00000020793	raver1	75	83.333	ENSRROG00000031186	RAVER1	71	83.333	Rhinopithecus_roxellana
ENSPLAG00000020793	raver1	92	49.863	ENSSBOG00000023423	RAVER1	95	49.378	Saimiri_boliviensis_boliviensis
ENSPLAG00000020793	raver1	85	50.453	ENSSHAG00000008181	-	83	51.252	Sarcophilus_harrisii
ENSPLAG00000020793	raver1	97	79.651	ENSSMAG00000004546	raver1	95	79.173	Scophthalmus_maximus
ENSPLAG00000020793	raver1	97	81.778	ENSSDUG00000021063	raver1	100	79.132	Seriola_dumerili
ENSPLAG00000020793	raver1	97	81.487	ENSSLDG00000014505	raver1	95	80.973	Seriola_lalandi_dorsalis
ENSPLAG00000020793	raver1	97	82.216	ENSSPAG00000000688	raver1	95	81.831	Stegastes_partitus
ENSPLAG00000020793	raver1	59	80.000	ENSSSCG00000013650	-	79	80.000	Sus_scrofa
ENSPLAG00000020793	raver1	97	72.926	ENSTRUG00000025641	raver1	95	72.571	Takifugu_rubripes
ENSPLAG00000020793	raver1	61	69.169	ENSTTRG00000009552	RAVER1	97	47.914	Tursiops_truncatus
ENSPLAG00000020793	raver1	63	68.571	ENSUAMG00000020385	RAVER1	59	69.722	Ursus_americanus
ENSPLAG00000020793	raver1	63	68.571	ENSVVUG00000028976	RAVER1	62	69.722	Vulpes_vulpes
ENSPLAG00000020793	raver1	76	65.934	ENSXETG00000011622	raver1	79	66.964	Xenopus_tropicalis
ENSPLAG00000020793	raver1	99	92.407	ENSXCOG00000016368	raver1	95	92.407	Xiphophorus_couchianus
ENSPLAG00000020793	raver1	99	92.120	ENSXMAG00000000217	raver1	95	92.120	Xiphophorus_maculatus