EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000020977 (Gene tree)
Gene ID: 106947477
Gene Symbol: grsf1
Alias: -
Full Name: G-rich sequence factor 1-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 6714 bases
Position: chrKQ545558.1:79501-86214
Accession: 106947477
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000030150	RRM_1	PF00076.22	3.3e-23	1	2
ENSPLAP00000030150	RRM_1	PF00076.22	3.3e-23	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000025783	-	1411	XM_015032498	ENSPLAP00000030150	401 (aa)	XP_014887984	UPI00072E0B25

Gene Model

Click here to download ENSPLAG00000020977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000020977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000020977	grsf1	77	55.696	ENSPLAG00000008895	-	68	55.696
ENSPLAG00000020977	grsf1	77	40.798	ENSPLAG00000011771	hnrnph1	80	40.244

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000020977	grsf1	99	63.235	ENSAPOG00000012487	grsf1	99	62.990	Acanthochromis_polyacanthus
ENSPLAG00000020977	grsf1	99	62.469	ENSACIG00000005871	grsf1	99	62.469	Amphilophus_citrinellus
ENSPLAG00000020977	grsf1	99	64.268	ENSAOCG00000017462	-	99	64.764	Amphiprion_ocellaris
ENSPLAG00000020977	grsf1	99	64.461	ENSAPEG00000007240	-	99	64.951	Amphiprion_percula
ENSPLAG00000020977	grsf1	99	62.871	ENSATEG00000007185	grsf1	99	61.614	Anabas_testudineus
ENSPLAG00000020977	grsf1	99	63.235	ENSACLG00000003685	-	99	63.235	Astatotilapia_calliptera
ENSPLAG00000020977	grsf1	86	45.794	ENSAMXG00000012270	grsf1	98	45.794	Astyanax_mexicanus
ENSPLAG00000020977	grsf1	99	54.942	ENSCSEG00000019209	-	99	56.364	Cynoglossus_semilaevis
ENSPLAG00000020977	grsf1	99	72.139	ENSCVAG00000004476	grsf1	99	71.642	Cyprinodon_variegatus
ENSPLAG00000020977	grsf1	98	44.776	ENSDARG00000053021	grsf1	93	44.279	Danio_rerio
ENSPLAG00000020977	grsf1	99	59.804	ENSFHEG00000013358	-	99	60.049	Fundulus_heteroclitus
ENSPLAG00000020977	grsf1	75	52.632	ENSGMOG00000014047	grsf1	99	52.632	Gadus_morhua
ENSPLAG00000020977	grsf1	100	91.521	ENSGAFG00000004496	grsf1	100	91.272	Gambusia_affinis
ENSPLAG00000020977	grsf1	76	59.517	ENSGACG00000014447	grsf1	96	59.517	Gasterosteus_aculeatus
ENSPLAG00000020977	grsf1	99	62.654	ENSHBUG00000006284	grsf1	99	61.765	Haplochromis_burtoni
ENSPLAG00000020977	grsf1	99	55.746	ENSHCOG00000007715	-	99	56.328	Hippocampus_comes
ENSPLAG00000020977	grsf1	80	50.621	ENSIPUG00000010533	grsf1	80	50.621	Ictalurus_punctatus
ENSPLAG00000020977	grsf1	99	58.451	ENSKMAG00000004528	grsf1	99	58.451	Kryptolebias_marmoratus
ENSPLAG00000020977	grsf1	78	51.592	ENSLBEG00000018100	grsf1	98	51.592	Labrus_bergylta
ENSPLAG00000020977	grsf1	99	63.861	ENSMAMG00000002627	grsf1	99	63.366	Mastacembelus_armatus
ENSPLAG00000020977	grsf1	99	63.235	ENSMZEG00005020633	-	99	63.235	Maylandia_zebra
ENSPLAG00000020977	grsf1	95	61.436	ENSMMOG00000014231	grsf1	99	60.825	Mola_mola
ENSPLAG00000020977	grsf1	99	60.741	ENSMALG00000000251	grsf1	99	60.298	Monopterus_albus
ENSPLAG00000020977	grsf1	99	61.728	ENSNBRG00000017774	grsf1	96	61.728	Neolamprologus_brichardi
ENSPLAG00000020977	grsf1	99	63.480	ENSONIG00000014119	grsf1	99	62.990	Oreochromis_niloticus
ENSPLAG00000020977	grsf1	99	57.644	ENSORLG00000030211	grsf1	98	57.895	Oryzias_latipes
ENSPLAG00000020977	grsf1	87	62.931	ENSORLG00020014383	grsf1	87	62.931	Oryzias_latipes_hni
ENSPLAG00000020977	grsf1	87	61.782	ENSORLG00015006520	grsf1	88	62.356	Oryzias_latipes_hsok
ENSPLAG00000020977	grsf1	87	63.610	ENSOMEG00000009181	grsf1	99	60.705	Oryzias_melastigma
ENSPLAG00000020977	grsf1	83	52.410	ENSPKIG00000019432	grsf1	95	47.264	Paramormyrops_kingsleyae
ENSPLAG00000020977	grsf1	83	60.997	ENSPMGG00000013654	grsf1	93	60.997	Periophthalmus_magnuspinnatus
ENSPLAG00000020977	grsf1	100	98.765	ENSPFOG00000006122	grsf1	100	98.765	Poecilia_formosa
ENSPLAG00000020977	grsf1	100	97.531	ENSPMEG00000012485	grsf1	100	97.531	Poecilia_mexicana
ENSPLAG00000020977	grsf1	100	96.782	ENSPREG00000013383	grsf1	100	96.782	Poecilia_reticulata
ENSPLAG00000020977	grsf1	99	62.990	ENSPNYG00000005379	grsf1	99	63.480	Pundamilia_nyererei
ENSPLAG00000020977	grsf1	89	49.307	ENSPNAG00000014912	grsf1	86	49.307	Pygocentrus_nattereri
ENSPLAG00000020977	grsf1	82	44.144	ENSSFOG00015014620	grsf1	83	44.144	Scleropages_formosus
ENSPLAG00000020977	grsf1	81	61.728	ENSSMAG00000014181	grsf1	70	61.420	Scophthalmus_maximus
ENSPLAG00000020977	grsf1	99	61.000	ENSSDUG00000009397	-	98	63.551	Seriola_dumerili
ENSPLAG00000020977	grsf1	99	60.349	ENSSLDG00000025494	grsf1	99	60.349	Seriola_lalandi_dorsalis
ENSPLAG00000020977	grsf1	99	63.725	ENSSPAG00000023296	grsf1	99	63.145	Stegastes_partitus
ENSPLAG00000020977	grsf1	97	57.360	ENSTRUG00000015354	grsf1	99	57.389	Takifugu_rubripes
ENSPLAG00000020977	grsf1	82	57.812	ENSTNIG00000015350	-	99	57.812	Tetraodon_nigroviridis
ENSPLAG00000020977	grsf1	99	89.750	ENSXMAG00000029710	grsf1	99	89.500	Xiphophorus_maculatus