EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000021043 (Gene tree)
Gene ID: 106958715
Gene Symbol: si:dkey-16l2.16
Alias: -
Full Name: ras-related protein Rab-35-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 9675 bases
Position: chrKQ546324.1:169489-179163
Accession: 106958715
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000016779	MMR_HSR1	PF01926.23	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000025836	-	2178	XM_015050763	ENSPLAP00000016779	209 (aa)	XP_014906249	UPI00072EB536

Gene Model

Click here to download ENSPLAG00000021043's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000021043's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000021043	si:dkey-16l2.16	74	44.379	ENSPLAG00000021278	rab33ba	70	44.379
ENSPLAG00000021043	si:dkey-16l2.16	83	43.103	ENSPLAG00000003558	rab25a	80	43.103
ENSPLAG00000021043	si:dkey-16l2.16	99	68.599	ENSPLAG00000020989	rab35b	99	68.599
ENSPLAG00000021043	si:dkey-16l2.16	83	31.250	ENSPLAG00000015650	rhebl1	93	31.250
ENSPLAG00000021043	si:dkey-16l2.16	79	31.492	ENSPLAG00000004043	rasl11a	69	31.492
ENSPLAG00000021043	si:dkey-16l2.16	78	35.503	ENSPLAG00000001529	rheb	89	35.503
ENSPLAG00000021043	si:dkey-16l2.16	81	36.571	ENSPLAG00000011866	rab9b	78	36.571
ENSPLAG00000021043	si:dkey-16l2.16	77	41.212	ENSPLAG00000022260	rab6ba	79	41.212
ENSPLAG00000021043	si:dkey-16l2.16	77	61.111	ENSPLAG00000018655	rab1ba	81	61.111
ENSPLAG00000021043	si:dkey-16l2.16	73	34.868	ENSPLAG00000015685	rabl2	68	34.868
ENSPLAG00000021043	si:dkey-16l2.16	74	34.416	ENSPLAG00000011697	rab23	78	35.000
ENSPLAG00000021043	si:dkey-16l2.16	77	40.854	ENSPLAG00000019570	rab6a	79	40.854
ENSPLAG00000021043	si:dkey-16l2.16	98	40.865	ENSPLAG00000011175	rab11a	96	40.865
ENSPLAG00000021043	si:dkey-16l2.16	79	44.643	ENSPLAG00000018322	-	79	44.643
ENSPLAG00000021043	si:dkey-16l2.16	77	41.818	ENSPLAG00000019707	rab6bb	79	41.818
ENSPLAG00000021043	si:dkey-16l2.16	98	37.981	ENSPLAG00000007986	rab11al	96	37.981
ENSPLAG00000021043	si:dkey-16l2.16	76	41.509	ENSPLAG00000016333	-	88	37.313
ENSPLAG00000021043	si:dkey-16l2.16	96	36.364	ENSPLAG00000007015	rab9a	92	36.364
ENSPLAG00000021043	si:dkey-16l2.16	73	42.208	ENSPLAG00000000376	rab41	73	42.208
ENSPLAG00000021043	si:dkey-16l2.16	98	39.713	ENSPLAG00000014207	-	96	39.713
ENSPLAG00000021043	si:dkey-16l2.16	76	45.732	ENSPLAG00000020627	zgc:101559	70	45.732
ENSPLAG00000021043	si:dkey-16l2.16	55	31.034	ENSPLAG00000001962	arl3	62	31.034
ENSPLAG00000021043	si:dkey-16l2.16	81	50.000	ENSPLAG00000005832	RAB13	91	50.000
ENSPLAG00000021043	si:dkey-16l2.16	98	39.713	ENSPLAG00000001598	rab11bb	96	39.713
ENSPLAG00000021043	si:dkey-16l2.16	95	30.198	ENSPLAG00000009163	rras	95	30.198
ENSPLAG00000021043	si:dkey-16l2.16	78	43.558	ENSPLAG00000022515	-	76	43.558
ENSPLAG00000021043	si:dkey-16l2.16	81	45.349	ENSPLAG00000005628	rab42a	79	45.349
ENSPLAG00000021043	si:dkey-16l2.16	69	45.395	ENSPLAG00000016172	-	63	45.395
ENSPLAG00000021043	si:dkey-16l2.16	87	47.802	ENSPLAG00000003181	-	91	47.802
ENSPLAG00000021043	si:dkey-16l2.16	75	46.012	ENSPLAG00000005189	rab33a	72	46.012
ENSPLAG00000021043	si:dkey-16l2.16	98	39.614	ENSPLAG00000008004	rab25b	95	39.614
ENSPLAG00000021043	si:dkey-16l2.16	77	34.568	ENSPLAG00000009352	KRAS	94	32.584
ENSPLAG00000021043	si:dkey-16l2.16	78	46.341	ENSPLAG00000010104	rab18a	80	46.341
ENSPLAG00000021043	si:dkey-16l2.16	99	32.093	ENSPLAG00000005074	rab34b	83	32.093
ENSPLAG00000021043	si:dkey-16l2.16	54	33.333	ENSPLAG00000019120	-	58	33.333
ENSPLAG00000021043	si:dkey-16l2.16	84	44.633	ENSPLAG00000023128	RAB15	84	44.633
ENSPLAG00000021043	si:dkey-16l2.16	77	38.509	ENSPLAG00000018718	rab22a	83	38.509
ENSPLAG00000021043	si:dkey-16l2.16	55	30.172	ENSPLAG00000008384	arl3l2	59	30.172
ENSPLAG00000021043	si:dkey-16l2.16	80	38.728	ENSPLAG00000001065	-	83	38.728
ENSPLAG00000021043	si:dkey-16l2.16	84	48.588	ENSPLAG00000006354	rab15	83	48.588
ENSPLAG00000021043	si:dkey-16l2.16	84	58.791	ENSPLAG00000015592	-	90	58.791
ENSPLAG00000021043	si:dkey-16l2.16	98	39.713	ENSPLAG00000014243	rab11ba	96	39.713
ENSPLAG00000021043	si:dkey-16l2.16	80	41.860	ENSPLAG00000007773	si:dkey-34d22.5	77	41.860
ENSPLAG00000021043	si:dkey-16l2.16	82	30.168	ENSPLAG00000002398	rasl11b	72	30.168
ENSPLAG00000021043	si:dkey-16l2.16	95	34.615	ENSPLAG00000022991	rab34a	73	34.615
ENSPLAG00000021043	si:dkey-16l2.16	96	35.821	ENSPLAG00000004790	rab5c	89	37.313
ENSPLAG00000021043	si:dkey-16l2.16	85	46.067	ENSPLAG00000015383	rab30	88	46.067
ENSPLAG00000021043	si:dkey-16l2.16	78	42.331	ENSPLAG00000004551	-	76	42.331
ENSPLAG00000021043	si:dkey-16l2.16	74	32.298	ENSPLAG00000008845	dnajc27	59	32.298
ENSPLAG00000021043	si:dkey-16l2.16	78	39.024	ENSPLAG00000017232	rab22a	90	39.024
ENSPLAG00000021043	si:dkey-16l2.16	96	36.364	ENSPLAG00000022926	rab9a	97	36.364
ENSPLAG00000021043	si:dkey-16l2.16	79	44.048	ENSPLAG00000007237	RAB39B	79	44.048
ENSPLAG00000021043	si:dkey-16l2.16	80	40.828	ENSPLAG00000014563	rab4a	79	40.828
ENSPLAG00000021043	si:dkey-16l2.16	82	40.462	ENSPLAG00000013594	rab12	71	40.462
ENSPLAG00000021043	si:dkey-16l2.16	78	35.542	ENSPLAG00000003379	hrasb	87	35.542
ENSPLAG00000021043	si:dkey-16l2.16	77	63.580	ENSPLAG00000005869	zgc:171927	76	63.580
ENSPLAG00000021043	si:dkey-16l2.16	78	46.951	ENSPLAG00000019136	rab18b	80	46.951
ENSPLAG00000021043	si:dkey-16l2.16	78	36.095	ENSPLAG00000002600	RAB29	77	36.095
ENSPLAG00000021043	si:dkey-16l2.16	77	63.580	ENSPLAG00000006520	rab1ab	80	63.580
ENSPLAG00000021043	si:dkey-16l2.16	98	36.667	ENSPLAG00000023374	rab2a	99	36.667
ENSPLAG00000021043	si:dkey-16l2.16	79	36.471	ENSPLAG00000019688	si:dkey-13a21.4	83	36.471
ENSPLAG00000021043	si:dkey-16l2.16	76	44.025	ENSPLAG00000017838	rab5aa	74	44.025
ENSPLAG00000021043	si:dkey-16l2.16	96	34.783	ENSPLAG00000006777	-	88	34.783
ENSPLAG00000021043	si:dkey-16l2.16	80	38.728	ENSPLAG00000002799	RAB7A	83	38.728
ENSPLAG00000021043	si:dkey-16l2.16	72	30.061	ENSPLAG00000012898	arl1	83	30.061
ENSPLAG00000021043	si:dkey-16l2.16	58	30.657	ENSPLAG00000022207	arfrp1	66	30.657

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000021043	si:dkey-16l2.16	100	86.603	ENSAPOG00000008263	si:dkey-16l2.16	100	86.603	Acanthochromis_polyacanthus
ENSPLAG00000021043	si:dkey-16l2.16	100	88.038	ENSAOCG00000016825	si:dkey-16l2.16	100	88.038	Amphiprion_ocellaris
ENSPLAG00000021043	si:dkey-16l2.16	100	88.038	ENSAPEG00000006500	si:dkey-16l2.16	100	88.038	Amphiprion_percula
ENSPLAG00000021043	si:dkey-16l2.16	100	88.038	ENSATEG00000019238	si:dkey-16l2.16	100	88.038	Anabas_testudineus
ENSPLAG00000021043	si:dkey-16l2.16	100	88.517	ENSACLG00000018721	si:dkey-16l2.16	100	88.517	Astatotilapia_calliptera
ENSPLAG00000021043	si:dkey-16l2.16	100	87.081	ENSAMXG00000038243	si:dkey-16l2.16	94	96.610	Astyanax_mexicanus
ENSPLAG00000021043	si:dkey-16l2.16	56	96.610	ENSCSEG00000009988	si:dkey-16l2.16	90	96.610	Cynoglossus_semilaevis
ENSPLAG00000021043	si:dkey-16l2.16	100	91.866	ENSCVAG00000003537	si:dkey-16l2.16	100	91.866	Cyprinodon_variegatus
ENSPLAG00000021043	si:dkey-16l2.16	100	86.124	ENSDARG00000037967	si:dkey-16l2.16	99	95.763	Danio_rerio
ENSPLAG00000021043	si:dkey-16l2.16	99	81.731	ENSELUG00000023247	si:dkey-16l2.16	99	81.731	Esox_lucius
ENSPLAG00000021043	si:dkey-16l2.16	58	94.215	ENSFHEG00000000767	si:dkey-16l2.16	78	94.215	Fundulus_heteroclitus
ENSPLAG00000021043	si:dkey-16l2.16	77	83.851	ENSGMOG00000015174	si:dkey-16l2.16	98	83.851	Gadus_morhua
ENSPLAG00000021043	si:dkey-16l2.16	100	99.522	ENSGAFG00000005388	si:dkey-16l2.16	100	99.522	Gambusia_affinis
ENSPLAG00000021043	si:dkey-16l2.16	100	86.603	ENSGACG00000014915	si:dkey-16l2.16	98	86.603	Gasterosteus_aculeatus
ENSPLAG00000021043	si:dkey-16l2.16	100	88.995	ENSHBUG00000019261	si:dkey-16l2.16	100	88.995	Haplochromis_burtoni
ENSPLAG00000021043	si:dkey-16l2.16	100	87.081	ENSHCOG00000006538	si:dkey-16l2.16	100	87.081	Hippocampus_comes
ENSPLAG00000021043	si:dkey-16l2.16	100	86.603	ENSKMAG00000003494	si:dkey-16l2.16	100	86.603	Kryptolebias_marmoratus
ENSPLAG00000021043	si:dkey-16l2.16	100	88.517	ENSLBEG00000007681	si:dkey-16l2.16	100	88.517	Labrus_bergylta
ENSPLAG00000021043	si:dkey-16l2.16	100	88.517	ENSMAMG00000019230	si:dkey-16l2.16	100	88.517	Mastacembelus_armatus
ENSPLAG00000021043	si:dkey-16l2.16	100	88.517	ENSMZEG00005002081	si:dkey-16l2.16	100	88.517	Maylandia_zebra
ENSPLAG00000021043	si:dkey-16l2.16	99	87.864	ENSMMOG00000020140	si:dkey-16l2.16	97	87.864	Mola_mola
ENSPLAG00000021043	si:dkey-16l2.16	100	87.560	ENSMALG00000014727	si:dkey-16l2.16	99	87.560	Monopterus_albus
ENSPLAG00000021043	si:dkey-16l2.16	100	88.038	ENSNBRG00000008930	si:dkey-16l2.16	100	88.038	Neolamprologus_brichardi
ENSPLAG00000021043	si:dkey-16l2.16	100	88.517	ENSONIG00000009443	si:dkey-16l2.16	100	88.517	Oreochromis_niloticus
ENSPLAG00000021043	si:dkey-16l2.16	100	84.689	ENSORLG00000001098	si:dkey-16l2.16	99	84.689	Oryzias_latipes
ENSPLAG00000021043	si:dkey-16l2.16	100	84.689	ENSORLG00020000867	si:dkey-16l2.16	99	84.689	Oryzias_latipes_hni
ENSPLAG00000021043	si:dkey-16l2.16	100	85.167	ENSOMEG00000015474	si:dkey-16l2.16	100	86.124	Oryzias_melastigma
ENSPLAG00000021043	si:dkey-16l2.16	100	85.167	ENSPKIG00000005686	-	100	85.167	Paramormyrops_kingsleyae
ENSPLAG00000021043	si:dkey-16l2.16	100	76.077	ENSPKIG00000018888	si:dkey-16l2.16	100	76.077	Paramormyrops_kingsleyae
ENSPLAG00000021043	si:dkey-16l2.16	100	87.560	ENSPMGG00000000751	si:dkey-16l2.16	100	87.560	Periophthalmus_magnuspinnatus
ENSPLAG00000021043	si:dkey-16l2.16	100	99.522	ENSPFOG00000004746	si:dkey-16l2.16	100	99.522	Poecilia_formosa
ENSPLAG00000021043	si:dkey-16l2.16	100	99.522	ENSPMEG00000007165	si:dkey-16l2.16	100	99.522	Poecilia_mexicana
ENSPLAG00000021043	si:dkey-16l2.16	100	99.522	ENSPREG00000005323	si:dkey-16l2.16	100	99.522	Poecilia_reticulata
ENSPLAG00000021043	si:dkey-16l2.16	100	88.995	ENSPNYG00000009490	si:dkey-16l2.16	100	88.995	Pundamilia_nyererei
ENSPLAG00000021043	si:dkey-16l2.16	100	87.560	ENSPNAG00000018986	si:dkey-16l2.16	100	87.560	Pygocentrus_nattereri
ENSPLAG00000021043	si:dkey-16l2.16	99	76.923	ENSSFOG00015006414	-	99	76.923	Scleropages_formosus
ENSPLAG00000021043	si:dkey-16l2.16	100	86.124	ENSSFOG00015021448	-	100	86.124	Scleropages_formosus
ENSPLAG00000021043	si:dkey-16l2.16	100	84.689	ENSSMAG00000011769	si:dkey-16l2.16	94	84.689	Scophthalmus_maximus
ENSPLAG00000021043	si:dkey-16l2.16	100	89.952	ENSSDUG00000005719	si:dkey-16l2.16	100	89.952	Seriola_dumerili
ENSPLAG00000021043	si:dkey-16l2.16	100	89.952	ENSSLDG00000003631	si:dkey-16l2.16	100	89.952	Seriola_lalandi_dorsalis
ENSPLAG00000021043	si:dkey-16l2.16	100	88.995	ENSSPAG00000006302	si:dkey-16l2.16	100	88.995	Stegastes_partitus
ENSPLAG00000021043	si:dkey-16l2.16	100	88.038	ENSTRUG00000025076	si:dkey-16l2.16	94	96.639	Takifugu_rubripes
ENSPLAG00000021043	si:dkey-16l2.16	100	88.995	ENSTNIG00000011300	si:dkey-16l2.16	100	88.995	Tetraodon_nigroviridis
ENSPLAG00000021043	si:dkey-16l2.16	100	99.043	ENSXMAG00000021767	si:dkey-16l2.16	100	99.043	Xiphophorus_maculatus