EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000021170 (Gene tree)
Gene ID: 106944760
Gene Symbol: fubp1
Alias: -
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 10622 bases
Position: chrKQ545427.1:46196-56817
Accession: 106944760
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000030171	KH_1	PF00013.29	3.3e-68	1	4
ENSPLAP00000030171	KH_1	PF00013.29	3.3e-68	2	4
ENSPLAP00000030171	KH_1	PF00013.29	3.3e-68	3	4
ENSPLAP00000030171	KH_1	PF00013.29	3.3e-68	4	4
ENSPLAP00000030204	KH_1	PF00013.29	7.1e-57	1	4
ENSPLAP00000030204	KH_1	PF00013.29	7.1e-57	2	4
ENSPLAP00000030204	KH_1	PF00013.29	7.1e-57	3	4
ENSPLAP00000030204	KH_1	PF00013.29	7.1e-57	4	4
ENSPLAP00000030171	KH_2	PF07650.17	1.2e-20	1	1
ENSPLAP00000030204	KH_2	PF07650.17	2.6e-14	1	1
ENSPLAP00000030204	DUF1897	PF09005.10	1.1e-13	1	1
ENSPLAP00000030171	DUF1897	PF09005.10	3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000025873	-	1926	XM_015028000	ENSPLAP00000030204	641 (aa)	XP_014883486	-
ENSPLAT00000025927	-	1836	XM_015028003	ENSPLAP00000030171	611 (aa)	XP_014883489	-

Gene Model

Click here to download ENSPLAG00000021170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000021170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000021170	fubp1	62	41.667	ENSPLAG00000017518	PCBP2	67	43.939
ENSPLAG00000021170	fubp1	55	32.121	ENSPLAG00000007777	igf2bp3	66	31.892
ENSPLAG00000021170	fubp1	62	41.667	ENSPLAG00000003153	pcbp2	90	41.667
ENSPLAG00000021170	fubp1	97	50.685	ENSPLAG00000010763	khsrp	97	51.662
ENSPLAG00000021170	fubp1	95	50.000	ENSPLAG00000008443	-	89	58.508
ENSPLAG00000021170	fubp1	54	35.065	ENSPLAG00000004074	-	62	35.065
ENSPLAG00000021170	fubp1	90	48.829	ENSPLAG00000016612	fubp3	91	46.667
ENSPLAG00000021170	fubp1	58	33.577	ENSPLAG00000015205	igf2bp1	62	30.435

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000021170	fubp1	72	78.587	ENSG00000162613	FUBP1	100	68.049	Homo_sapiens
ENSPLAG00000021170	fubp1	96	93.086	ENSAPOG00000014845	fubp1	98	87.859	Acanthochromis_polyacanthus
ENSPLAG00000021170	fubp1	72	74.636	ENSAMEG00000007372	FUBP1	100	65.875	Ailuropoda_melanoleuca
ENSPLAG00000021170	fubp1	100	85.604	ENSACIG00000020024	fubp1	100	85.827	Amphilophus_citrinellus
ENSPLAG00000021170	fubp1	100	93.496	ENSAPEG00000012232	fubp1	100	93.053	Amphiprion_percula
ENSPLAG00000021170	fubp1	100	92.966	ENSATEG00000018619	fubp1	100	93.005	Anabas_testudineus
ENSPLAG00000021170	fubp1	67	80.630	ENSAPLG00000005965	FUBP1	100	70.033	Anas_platyrhynchos
ENSPLAG00000021170	fubp1	99	60.515	ENSACAG00000006310	FUBP1	96	63.343	Anolis_carolinensis
ENSPLAG00000021170	fubp1	100	94.108	ENSACLG00000006708	fubp1	100	94.108	Astatotilapia_calliptera
ENSPLAG00000021170	fubp1	86	82.674	ENSAMXG00000005525	fubp1	99	84.557	Astyanax_mexicanus
ENSPLAG00000021170	fubp1	72	78.808	ENSCJAG00000007062	FUBP1	100	68.421	Callithrix_jacchus
ENSPLAG00000021170	fubp1	72	78.384	ENSCAFG00000020361	FUBP1	100	68.203	Canis_familiaris
ENSPLAG00000021170	fubp1	67	79.904	ENSTSYG00000000148	FUBP1	100	68.412	Carlito_syrichta
ENSPLAG00000021170	fubp1	57	84.677	ENSCAPG00000011052	-	65	84.677	Cavia_aperea
ENSPLAG00000021170	fubp1	72	78.384	ENSCPOG00000002757	FUBP1	98	70.946	Cavia_porcellus
ENSPLAG00000021170	fubp1	72	64.000	ENSCCAG00000036537	FUBP1	100	64.571	Cebus_capucinus
ENSPLAG00000021170	fubp1	72	78.166	ENSCATG00000042126	FUBP1	100	68.049	Cercocebus_atys
ENSPLAG00000021170	fubp1	72	78.384	ENSCLAG00000005621	FUBP1	100	72.152	Chinchilla_lanigera
ENSPLAG00000021170	fubp1	72	78.166	ENSCSAG00000001402	FUBP1	100	68.049	Chlorocebus_sabaeus
ENSPLAG00000021170	fubp1	72	78.166	ENSCHOG00000008177	FUBP1	98	68.154	Choloepus_hoffmanni
ENSPLAG00000021170	fubp1	72	80.134	ENSCGRG00001007103	Fubp1	100	69.029	Cricetulus_griseus_chok1gshd
ENSPLAG00000021170	fubp1	67	80.144	ENSCGRG00000003372	Fubp1	100	68.730	Cricetulus_griseus_crigri
ENSPLAG00000021170	fubp1	100	91.214	ENSCSEG00000021412	fubp1	98	91.214	Cynoglossus_semilaevis
ENSPLAG00000021170	fubp1	99	96.166	ENSCVAG00000014487	fubp1	99	96.166	Cyprinodon_variegatus
ENSPLAG00000021170	fubp1	100	78.571	ENSDARG00000029248	fubp1	100	81.832	Danio_rerio
ENSPLAG00000021170	fubp1	78	55.882	ENSDNOG00000034565	-	69	49.545	Dasypus_novemcinctus
ENSPLAG00000021170	fubp1	72	78.384	ENSDORG00000016534	Fubp1	98	68.000	Dipodomys_ordii
ENSPLAG00000021170	fubp1	78	78.655	ENSETEG00000000948	-	53	78.947	Echinops_telfairi
ENSPLAG00000021170	fubp1	68	73.529	ENSEBUG00000016143	fubp1	63	68.966	Eptatretus_burgeri
ENSPLAG00000021170	fubp1	71	83.784	ENSEEUG00000001287	FUBP1	87	70.492	Erinaceus_europaeus
ENSPLAG00000021170	fubp1	100	82.316	ENSELUG00000007990	fubp1	100	84.194	Esox_lucius
ENSPLAG00000021170	fubp1	72	79.379	ENSFALG00000005768	FUBP1	97	70.093	Ficedula_albicollis
ENSPLAG00000021170	fubp1	72	78.166	ENSFDAG00000014210	FUBP1	100	70.270	Fukomys_damarensis
ENSPLAG00000021170	fubp1	100	96.942	ENSFHEG00000005230	fubp1	100	96.942	Fundulus_heteroclitus
ENSPLAG00000021170	fubp1	100	82.780	ENSGMOG00000003370	fubp1	100	83.228	Gadus_morhua
ENSPLAG00000021170	fubp1	86	77.017	ENSGALG00000008939	FUBP1	100	71.473	Gallus_gallus
ENSPLAG00000021170	fubp1	100	95.639	ENSGAFG00000020972	fubp1	100	95.639	Gambusia_affinis
ENSPLAG00000021170	fubp1	100	87.656	ENSGACG00000016563	fubp1	100	88.263	Gasterosteus_aculeatus
ENSPLAG00000021170	fubp1	100	92.649	ENSHBUG00000009835	fubp1	100	91.577	Haplochromis_burtoni
ENSPLAG00000021170	fubp1	72	78.384	ENSHGLG00000008415	-	100	72.152	Heterocephalus_glaber_female
ENSPLAG00000021170	fubp1	74	73.856	ENSHGLG00000002808	-	72	71.366	Heterocephalus_glaber_female
ENSPLAG00000021170	fubp1	74	74.510	ENSHGLG00100001414	-	72	72.247	Heterocephalus_glaber_male
ENSPLAG00000021170	fubp1	72	78.384	ENSHGLG00100003417	-	100	68.043	Heterocephalus_glaber_male
ENSPLAG00000021170	fubp1	100	88.060	ENSHCOG00000000910	fubp1	100	88.217	Hippocampus_comes
ENSPLAG00000021170	fubp1	100	81.171	ENSIPUG00000009896	fubp1	100	83.386	Ictalurus_punctatus
ENSPLAG00000021170	fubp1	72	78.971	ENSSTOG00000014312	FUBP1	100	68.203	Ictidomys_tridecemlineatus
ENSPLAG00000021170	fubp1	72	79.018	ENSJJAG00000020069	Fubp1	100	70.270	Jaculus_jaculus
ENSPLAG00000021170	fubp1	100	94.521	ENSKMAG00000018897	fubp1	100	94.521	Kryptolebias_marmoratus
ENSPLAG00000021170	fubp1	99	89.701	ENSLBEG00000012700	fubp1	97	88.657	Labrus_bergylta
ENSPLAG00000021170	fubp1	97	78.431	ENSLOCG00000003745	fubp1	99	74.112	Lepisosteus_oculatus
ENSPLAG00000021170	fubp1	72	75.262	ENSLAFG00000003273	FUBP1	99	70.036	Loxodonta_africana
ENSPLAG00000021170	fubp1	72	78.587	ENSMFAG00000031825	FUBP1	100	68.266	Macaca_fascicularis
ENSPLAG00000021170	fubp1	72	78.747	ENSMMUG00000002899	FUBP1	100	68.049	Macaca_mulatta
ENSPLAG00000021170	fubp1	72	78.166	ENSMNEG00000045212	FUBP1	100	68.049	Macaca_nemestrina
ENSPLAG00000021170	fubp1	99	90.634	ENSMAMG00000007489	fubp1	99	85.477	Mastacembelus_armatus
ENSPLAG00000021170	fubp1	100	92.663	ENSMZEG00005024298	fubp1	100	92.504	Maylandia_zebra
ENSPLAG00000021170	fubp1	67	80.676	ENSMGAG00000009424	FUBP1	100	71.005	Meleagris_gallopavo
ENSPLAG00000021170	fubp1	72	78.603	ENSMAUG00000016428	Fubp1	98	70.946	Mesocricetus_auratus
ENSPLAG00000021170	fubp1	72	79.075	ENSMOCG00000014751	Fubp1	100	68.594	Microtus_ochrogaster
ENSPLAG00000021170	fubp1	86	89.051	ENSMMOG00000019463	fubp1	99	89.397	Mola_mola
ENSPLAG00000021170	fubp1	69	72.870	ENSMODG00000020804	FUBP1	100	63.893	Monodelphis_domestica
ENSPLAG00000021170	fubp1	100	92.802	ENSMALG00000015173	fubp1	100	92.516	Monopterus_albus
ENSPLAG00000021170	fubp1	72	79.510	MGP_CAROLIEiJ_G0025740	Fubp1	99	76.145	Mus_caroli
ENSPLAG00000021170	fubp1	72	79.287	ENSMUSG00000028034	Fubp1	99	75.954	Mus_musculus
ENSPLAG00000021170	fubp1	72	79.333	MGP_PahariEiJ_G0027191	Fubp1	99	76.000	Mus_pahari
ENSPLAG00000021170	fubp1	72	79.510	MGP_SPRETEiJ_G0026693	Fubp1	99	76.145	Mus_spretus
ENSPLAG00000021170	fubp1	72	74.481	ENSMLUG00000014802	FUBP1	100	66.765	Myotis_lucifugus
ENSPLAG00000021170	fubp1	72	75.717	ENSNGAG00000014302	Fubp1	98	70.270	Nannospalax_galili
ENSPLAG00000021170	fubp1	100	94.272	ENSNBRG00000015099	fubp1	100	94.272	Neolamprologus_brichardi
ENSPLAG00000021170	fubp1	72	74.123	ENSNLEG00000009772	FUBP1	100	67.488	Nomascus_leucogenys
ENSPLAG00000021170	fubp1	57	83.824	ENSMEUG00000007917	-	64	69.231	Notamacropus_eugenii
ENSPLAG00000021170	fubp1	89	68.300	ENSOPRG00000001175	FUBP1	98	58.094	Ochotona_princeps
ENSPLAG00000021170	fubp1	99	52.866	ENSODEG00000003657	-	99	51.278	Octodon_degus
ENSPLAG00000021170	fubp1	72	78.384	ENSODEG00000002600	-	100	70.270	Octodon_degus
ENSPLAG00000021170	fubp1	99	92.627	ENSONIG00000018381	fubp1	99	91.905	Oreochromis_niloticus
ENSPLAG00000021170	fubp1	62	80.928	ENSOANG00000009777	FUBP1	99	65.359	Ornithorhynchus_anatinus
ENSPLAG00000021170	fubp1	99	91.475	ENSORLG00000003540	fubp1	99	91.475	Oryzias_latipes
ENSPLAG00000021170	fubp1	100	91.337	ENSORLG00020005908	fubp1	99	89.902	Oryzias_latipes_hni
ENSPLAG00000021170	fubp1	100	90.895	ENSORLG00015008779	fubp1	100	90.379	Oryzias_latipes_hsok
ENSPLAG00000021170	fubp1	100	91.172	ENSOMEG00000021943	fubp1	100	88.057	Oryzias_melastigma
ENSPLAG00000021170	fubp1	72	74.327	ENSOGAG00000014233	FUBP1	100	65.782	Otolemur_garnettii
ENSPLAG00000021170	fubp1	72	78.808	ENSOARG00000013259	FUBP1	100	66.066	Ovis_aries
ENSPLAG00000021170	fubp1	72	78.384	ENSPPRG00000000413	FUBP1	100	68.203	Panthera_pardus
ENSPLAG00000021170	fubp1	72	78.384	ENSPTIG00000019450	FUBP1	100	68.203	Panthera_tigris_altaica
ENSPLAG00000021170	fubp1	68	79.524	ENSPSIG00000012965	FUBP1	100	69.444	Pelodiscus_sinensis
ENSPLAG00000021170	fubp1	99	83.651	ENSPMGG00000009060	fubp1	99	82.381	Periophthalmus_magnuspinnatus
ENSPLAG00000021170	fubp1	72	79.470	ENSPEMG00000021802	Fubp1	100	70.270	Peromyscus_maniculatus_bairdii
ENSPLAG00000021170	fubp1	59	59.825	ENSPMAG00000001644	-	93	59.389	Petromyzon_marinus
ENSPLAG00000021170	fubp1	100	97.859	ENSPFOG00000000238	fubp1	100	97.859	Poecilia_formosa
ENSPLAG00000021170	fubp1	96	96.259	ENSPMEG00000004747	fubp1	99	97.822	Poecilia_mexicana
ENSPLAG00000021170	fubp1	100	97.706	ENSPREG00000017911	fubp1	100	97.706	Poecilia_reticulata
ENSPLAG00000021170	fubp1	74	78.017	ENSPPYG00000001219	-	68	79.157	Pongo_abelii
ENSPLAG00000021170	fubp1	72	78.337	ENSPCAG00000012617	FUBP1	98	68.105	Procavia_capensis
ENSPLAG00000021170	fubp1	72	78.714	ENSPCOG00000024974	FUBP1	100	68.203	Propithecus_coquereli
ENSPLAG00000021170	fubp1	92	70.614	ENSPVAG00000014637	FUBP1	98	65.231	Pteropus_vampyrus
ENSPLAG00000021170	fubp1	100	92.663	ENSPNYG00000004552	fubp1	100	92.504	Pundamilia_nyererei
ENSPLAG00000021170	fubp1	100	82.753	ENSPNAG00000016207	fubp1	98	80.880	Pygocentrus_nattereri
ENSPLAG00000021170	fubp1	72	79.510	ENSRNOG00000043370	Fubp1	100	68.992	Rattus_norvegicus
ENSPLAG00000021170	fubp1	72	78.166	ENSRBIG00000042950	FUBP1	100	68.049	Rhinopithecus_bieti
ENSPLAG00000021170	fubp1	72	78.166	ENSRROG00000043534	FUBP1	100	68.049	Rhinopithecus_roxellana
ENSPLAG00000021170	fubp1	72	78.384	ENSSBOG00000027299	FUBP1	100	68.203	Saimiri_boliviensis_boliviensis
ENSPLAG00000021170	fubp1	67	78.910	ENSSHAG00000005367	FUBP1	99	69.780	Sarcophilus_harrisii
ENSPLAG00000021170	fubp1	99	81.106	ENSSFOG00015010213	fubp1	98	82.051	Scleropages_formosus
ENSPLAG00000021170	fubp1	100	86.161	ENSSMAG00000012029	fubp1	98	81.548	Scophthalmus_maximus
ENSPLAG00000021170	fubp1	100	92.180	ENSSDUG00000007383	fubp1	95	92.163	Seriola_dumerili
ENSPLAG00000021170	fubp1	100	92.188	ENSSLDG00000022863	fubp1	100	91.993	Seriola_lalandi_dorsalis
ENSPLAG00000021170	fubp1	72	87.356	ENSSARG00000011730	FUBP1	56	87.209	Sorex_araneus
ENSPLAG00000021170	fubp1	99	66.172	ENSSPUG00000008389	FUBP1	100	63.066	Sphenodon_punctatus
ENSPLAG00000021170	fubp1	100	93.109	ENSSPAG00000010161	fubp1	99	90.909	Stegastes_partitus
ENSPLAG00000021170	fubp1	67	79.714	ENSTGUG00000006841	FUBP1	100	69.508	Taeniopygia_guttata
ENSPLAG00000021170	fubp1	96	89.456	ENSTRUG00000004615	fubp1	85	88.095	Takifugu_rubripes
ENSPLAG00000021170	fubp1	77	82.738	ENSTBEG00000017333	FUBP1	62	87.500	Tupaia_belangeri
ENSPLAG00000021170	fubp1	72	78.384	ENSTTRG00000000096	FUBP1	98	68.000	Tursiops_truncatus
ENSPLAG00000021170	fubp1	72	78.384	ENSVPAG00000004709	FUBP1	99	68.000	Vicugna_pacos
ENSPLAG00000021170	fubp1	100	86.603	ENSXCOG00000019354	fubp1	100	81.747	Xiphophorus_couchianus
ENSPLAG00000021170	fubp1	96	95.918	ENSXMAG00000007168	fubp1	99	97.655	Xiphophorus_maculatus