EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000021304 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 6870 bases
Position: chrKQ549328.1:22410-29279
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000030335	RVT_1	PF00078.27	2.4e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000026115	-	1263	-	ENSPLAP00000030335	420 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000021304's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000021304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000021304	-	94	76.396	ENSPLAG00000015080	-	94	76.396

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000021304	-	63	37.218	ENSACLG00000006900	-	74	37.218	Astatotilapia_calliptera
ENSPLAG00000021304	-	92	32.412	ENSDARG00000086849	si:dkey-187k19.2	68	32.412	Danio_rerio
ENSPLAG00000021304	-	63	39.098	ENSEBUG00000005774	-	84	39.098	Eptatretus_burgeri
ENSPLAG00000021304	-	84	39.205	ENSHBUG00000020868	-	85	39.205	Haplochromis_burtoni
ENSPLAG00000021304	-	66	38.628	ENSKMAG00000007124	-	56	38.628	Kryptolebias_marmoratus
ENSPLAG00000021304	-	69	38.908	ENSLBEG00000018239	-	98	38.908	Labrus_bergylta
ENSPLAG00000021304	-	55	31.915	ENSLOCG00000000597	-	52	31.915	Lepisosteus_oculatus
ENSPLAG00000021304	-	72	42.532	ENSLOCG00000018030	-	86	42.532	Lepisosteus_oculatus
ENSPLAG00000021304	-	60	35.547	ENSLOCG00000017441	-	75	35.547	Lepisosteus_oculatus
ENSPLAG00000021304	-	57	34.025	ENSONIG00000020426	-	67	34.025	Oreochromis_niloticus
ENSPLAG00000021304	-	56	32.922	ENSORLG00000029764	-	90	32.922	Oryzias_latipes
ENSPLAG00000021304	-	86	36.785	ENSORLG00000029559	-	91	36.785	Oryzias_latipes
ENSPLAG00000021304	-	94	35.338	ENSORLG00020008765	-	50	35.338	Oryzias_latipes_hni
ENSPLAG00000021304	-	92	35.787	ENSORLG00015017584	-	55	35.787	Oryzias_latipes_hsok
ENSPLAG00000021304	-	51	32.273	ENSPFOG00000022364	-	74	32.273	Poecilia_formosa
ENSPLAG00000021304	-	92	31.633	ENSPFOG00000023623	-	57	31.633	Poecilia_formosa
ENSPLAG00000021304	-	88	72.507	ENSPMEG00000005418	-	93	72.507	Poecilia_mexicana
ENSPLAG00000021304	-	95	99.749	ENSPMEG00000021732	-	97	99.749	Poecilia_mexicana
ENSPLAG00000021304	-	74	34.069	ENSSFOG00015015726	-	100	34.069	Scleropages_formosus
ENSPLAG00000021304	-	64	39.925	ENSSLDG00000000237	-	93	38.832	Seriola_lalandi_dorsalis
ENSPLAG00000021304	-	83	61.494	ENSXCOG00000012075	-	84	61.494	Xiphophorus_couchianus
ENSPLAG00000021304	-	88	72.162	ENSXMAG00000028317	-	83	72.162	Xiphophorus_maculatus
ENSPLAG00000021304	-	88	72.432	ENSXMAG00000020872	-	83	72.432	Xiphophorus_maculatus