EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000021311 (Gene tree)
Gene ID: 106939763
Gene Symbol: mtrex
Alias: -
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 23490 bases
Position: chrKQ548255.1:25552-49041
Accession: 106939763
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000016808	rRNA_proc-arch	PF13234.6	2.3e-88	1	1
ENSPLAP00000016840	rRNA_proc-arch	PF13234.6	2.3e-88	1	1
ENSPLAP00000016857	rRNA_proc-arch	PF13234.6	2.3e-88	1	1
ENSPLAP00000030226	rRNA_proc-arch	PF13234.6	2.3e-88	1	1
ENSPLAP00000030233	rRNA_proc-arch	PF13234.6	2.3e-88	1	1
ENSPLAP00000016796	rRNA_proc-arch	PF13234.6	6.1e-88	1	1
ENSPLAP00000016808	DEAD	PF00270.29	1e-16	1	1
ENSPLAP00000016840	DEAD	PF00270.29	1e-16	1	1
ENSPLAP00000016857	DEAD	PF00270.29	1e-16	1	1
ENSPLAP00000030226	DEAD	PF00270.29	1e-16	1	1
ENSPLAP00000030233	DEAD	PF00270.29	1e-16	1	1
ENSPLAP00000016796	DEAD	PF00270.29	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000025877	-	4761	-	ENSPLAP00000016808	1036 (aa)	-	UPI00072EB53D
ENSPLAT00000025888	-	4761	XM_015022302	ENSPLAP00000030226	1036 (aa)	XP_014877788	UPI00072EB53D
ENSPLAT00000025922	-	4761	-	ENSPLAP00000016840	1036 (aa)	-	UPI00072EB53D
ENSPLAT00000025913	-	4761	-	ENSPLAP00000016857	1036 (aa)	-	UPI00072EB53D
ENSPLAT00000025938	-	4761	-	ENSPLAP00000030233	1036 (aa)	-	UPI00072EB53D
ENSPLAT00000025853	-	3012	-	ENSPLAP00000016796	1003 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000021311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000021311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000021311	mtrex	92	34.711	ENSPLAG00000018304	skiv2l	76	36.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000021311	mtrex	100	83.413	ENSG00000039123	MTREX	100	83.317	Homo_sapiens
ENSPLAG00000021311	mtrex	100	93.828	ENSAPOG00000007814	mtrex	100	93.828	Acanthochromis_polyacanthus
ENSPLAG00000021311	mtrex	100	83.429	ENSAMEG00000013856	MTREX	100	83.333	Ailuropoda_melanoleuca
ENSPLAG00000021311	mtrex	100	90.364	ENSACIG00000015117	mtrex	100	90.265	Amphilophus_citrinellus
ENSPLAG00000021311	mtrex	100	94.021	ENSAOCG00000011884	mtrex	100	94.021	Amphiprion_ocellaris
ENSPLAG00000021311	mtrex	100	94.021	ENSAPEG00000019384	mtrex	100	94.021	Amphiprion_percula
ENSPLAG00000021311	mtrex	100	93.539	ENSATEG00000015117	mtrex	100	93.539	Anabas_testudineus
ENSPLAG00000021311	mtrex	97	85.204	ENSAPLG00000009694	MTREX	100	85.119	Anas_platyrhynchos
ENSPLAG00000021311	mtrex	100	84.483	ENSACAG00000015200	MTREX	96	84.402	Anolis_carolinensis
ENSPLAG00000021311	mtrex	100	83.954	ENSANAG00000023095	MTREX	100	83.794	Aotus_nancymaae
ENSPLAG00000021311	mtrex	100	93.443	ENSACLG00000001921	mtrex	100	93.443	Astatotilapia_calliptera
ENSPLAG00000021311	mtrex	95	86.235	ENSAMXG00000018751	mtrex	99	86.134	Astyanax_mexicanus
ENSPLAG00000021311	mtrex	100	84.115	ENSBTAG00000010518	MTREX	100	83.794	Bos_taurus
ENSPLAG00000021311	mtrex	91	53.879	WBGene00012342	mtr-4	91	53.879	Caenorhabditis_elegans
ENSPLAG00000021311	mtrex	100	83.033	ENSCJAG00000001773	MTREX	100	83.318	Callithrix_jacchus
ENSPLAG00000021311	mtrex	100	83.603	ENSCAFG00000006818	MTREX	100	83.508	Canis_familiaris
ENSPLAG00000021311	mtrex	100	83.603	ENSCAFG00020024352	MTREX	100	83.508	Canis_lupus_dingo
ENSPLAG00000021311	mtrex	100	83.603	ENSCHIG00000024413	MTREX	100	83.413	Capra_hircus
ENSPLAG00000021311	mtrex	93	85.278	ENSTSYG00000007389	MTREX	100	85.278	Carlito_syrichta
ENSPLAG00000021311	mtrex	86	76.484	ENSCAPG00000008696	MTREX	91	76.606	Cavia_aperea
ENSPLAG00000021311	mtrex	100	83.889	ENSCPOG00000009797	MTREX	100	83.889	Cavia_porcellus
ENSPLAG00000021311	mtrex	100	83.619	ENSCCAG00000014177	MTREX	100	83.794	Cebus_capucinus
ENSPLAG00000021311	mtrex	100	83.603	ENSCATG00000042153	MTREX	100	83.668	Cercocebus_atys
ENSPLAG00000021311	mtrex	100	83.889	ENSCLAG00000006622	MTREX	100	83.954	Chinchilla_lanigera
ENSPLAG00000021311	mtrex	100	79.753	ENSCSAG00000016445	MTREX	100	79.658	Chlorocebus_sabaeus
ENSPLAG00000021311	mtrex	69	95.833	ENSCHOG00000010936	-	70	95.833	Choloepus_hoffmanni
ENSPLAG00000021311	mtrex	100	84.630	ENSCPBG00000026551	MTREX	94	84.423	Chrysemys_picta_bellii
ENSPLAG00000021311	mtrex	99	65.275	ENSCING00000003239	-	99	65.425	Ciona_intestinalis
ENSPLAG00000021311	mtrex	99	64.813	ENSCSAVG00000009304	-	100	69.346	Ciona_savignyi
ENSPLAG00000021311	mtrex	100	83.508	ENSCANG00000035770	MTREX	100	83.413	Colobus_angolensis_palliatus
ENSPLAG00000021311	mtrex	100	83.668	ENSCGRG00001024680	Mtrex	100	83.859	Cricetulus_griseus_chok1gshd
ENSPLAG00000021311	mtrex	100	83.668	ENSCGRG00000000307	Mtrex	100	83.859	Cricetulus_griseus_crigri
ENSPLAG00000021311	mtrex	100	91.418	ENSCSEG00000018621	mtrex	98	91.418	Cynoglossus_semilaevis
ENSPLAG00000021311	mtrex	100	96.236	ENSCVAG00000004556	mtrex	100	96.236	Cyprinodon_variegatus
ENSPLAG00000021311	mtrex	100	86.210	ENSDARG00000013457	mtrex	100	86.114	Danio_rerio
ENSPLAG00000021311	mtrex	100	83.635	ENSDNOG00000015375	MTREX	100	83.555	Dasypus_novemcinctus
ENSPLAG00000021311	mtrex	100	83.954	ENSDORG00000006782	Mtrex	100	83.889	Dipodomys_ordii
ENSPLAG00000021311	mtrex	98	62.829	FBgn0001986	Mtr4	97	62.633	Drosophila_melanogaster
ENSPLAG00000021311	mtrex	90	68.450	ENSETEG00000000727	MTREX	90	68.450	Echinops_telfairi
ENSPLAG00000021311	mtrex	99	73.185	ENSEBUG00000012869	mtrex	99	73.114	Eptatretus_burgeri
ENSPLAG00000021311	mtrex	100	83.492	ENSEASG00005013270	MTREX	100	83.699	Equus_asinus_asinus
ENSPLAG00000021311	mtrex	100	83.588	ENSECAG00000023723	MTREX	100	88.889	Equus_caballus
ENSPLAG00000021311	mtrex	98	76.117	ENSEEUG00000000527	MTREX	100	76.066	Erinaceus_europaeus
ENSPLAG00000021311	mtrex	98	87.390	ENSELUG00000004898	mtrex	100	91.605	Esox_lucius
ENSPLAG00000021311	mtrex	100	83.699	ENSFCAG00000010575	MTREX	100	83.603	Felis_catus
ENSPLAG00000021311	mtrex	100	83.077	ENSFALG00000010850	MTREX	100	83.189	Ficedula_albicollis
ENSPLAG00000021311	mtrex	100	83.413	ENSFDAG00000011199	MTREX	100	83.317	Fukomys_damarensis
ENSPLAG00000021311	mtrex	100	95.946	ENSFHEG00000023014	mtrex	100	93.177	Fundulus_heteroclitus
ENSPLAG00000021311	mtrex	100	85.535	ENSGMOG00000014702	mtrex	100	86.017	Gadus_morhua
ENSPLAG00000021311	mtrex	100	84.008	ENSGALG00000014709	MTREX	86	84.008	Gallus_gallus
ENSPLAG00000021311	mtrex	100	97.876	ENSGAFG00000012425	mtrex	100	97.876	Gambusia_affinis
ENSPLAG00000021311	mtrex	100	87.464	ENSGACG00000016260	mtrex	96	91.848	Gasterosteus_aculeatus
ENSPLAG00000021311	mtrex	100	84.231	ENSGAGG00000020036	MTREX	100	84.150	Gopherus_agassizii
ENSPLAG00000021311	mtrex	100	83.508	ENSGGOG00000001867	MTREX	100	83.413	Gorilla_gorilla
ENSPLAG00000021311	mtrex	100	93.443	ENSHBUG00000006229	mtrex	100	93.443	Haplochromis_burtoni
ENSPLAG00000021311	mtrex	100	83.828	ENSHGLG00000019445	SKIV2L2	100	83.732	Heterocephalus_glaber_female
ENSPLAG00000021311	mtrex	100	83.828	ENSHGLG00100011833	SKIV2L2	100	83.732	Heterocephalus_glaber_male
ENSPLAG00000021311	mtrex	92	90.010	ENSHCOG00000019995	mtrex	100	90.010	Hippocampus_comes
ENSPLAG00000021311	mtrex	100	85.948	ENSIPUG00000024348	skiv2l2	100	86.044	Ictalurus_punctatus
ENSPLAG00000021311	mtrex	100	83.859	ENSSTOG00000010802	MTREX	100	83.603	Ictidomys_tridecemlineatus
ENSPLAG00000021311	mtrex	100	79.059	ENSJJAG00000020975	Mtrex	100	78.963	Jaculus_jaculus
ENSPLAG00000021311	mtrex	100	94.305	ENSKMAG00000012642	mtrex	100	94.305	Kryptolebias_marmoratus
ENSPLAG00000021311	mtrex	100	92.478	ENSLBEG00000019367	mtrex	100	92.478	Labrus_bergylta
ENSPLAG00000021311	mtrex	100	84.712	ENSLACG00000009075	MTREX	100	84.630	Latimeria_chalumnae
ENSPLAG00000021311	mtrex	100	86.263	ENSLOCG00000010186	mtrex	100	86.263	Lepisosteus_oculatus
ENSPLAG00000021311	mtrex	99	81.393	ENSLAFG00000010497	MTREX	100	81.584	Loxodonta_africana
ENSPLAG00000021311	mtrex	100	83.603	ENSMFAG00000031610	MTREX	100	83.668	Macaca_fascicularis
ENSPLAG00000021311	mtrex	100	83.270	ENSMMUG00000010379	MTREX	100	83.699	Macaca_mulatta
ENSPLAG00000021311	mtrex	100	83.603	ENSMNEG00000032746	MTREX	100	83.668	Macaca_nemestrina
ENSPLAG00000021311	mtrex	100	83.603	ENSMLEG00000041051	MTREX	100	83.668	Mandrillus_leucophaeus
ENSPLAG00000021311	mtrex	96	94.472	ENSMAMG00000016753	mtrex	98	94.472	Mastacembelus_armatus
ENSPLAG00000021311	mtrex	100	93.443	ENSMZEG00005000414	mtrex	100	93.443	Maylandia_zebra
ENSPLAG00000021311	mtrex	95	62.601	ENSMGAG00000003980	MTREX	99	62.500	Meleagris_gallopavo
ENSPLAG00000021311	mtrex	100	83.588	ENSMAUG00000010727	Mtrex	100	83.508	Mesocricetus_auratus
ENSPLAG00000021311	mtrex	100	83.985	ENSMICG00000012779	MTREX	100	83.985	Microcebus_murinus
ENSPLAG00000021311	mtrex	100	83.779	ENSMOCG00000019886	Mtrex	100	83.683	Microtus_ochrogaster
ENSPLAG00000021311	mtrex	100	89.595	ENSMMOG00000002476	mtrex	100	89.595	Mola_mola
ENSPLAG00000021311	mtrex	100	84.038	ENSMODG00000019494	MTREX	100	84.438	Monodelphis_domestica
ENSPLAG00000021311	mtrex	100	84.155	ENSMALG00000002917	mtrex	99	89.308	Monopterus_albus
ENSPLAG00000021311	mtrex	100	83.923	MGP_CAROLIEiJ_G0018896	Mtrex	100	83.556	Mus_caroli
ENSPLAG00000021311	mtrex	100	83.828	ENSMUSG00000016018	Mtrex	100	83.461	Mus_musculus
ENSPLAG00000021311	mtrex	100	83.636	MGP_PahariEiJ_G0015967	Mtrex	100	83.270	Mus_pahari
ENSPLAG00000021311	mtrex	100	83.828	MGP_SPRETEiJ_G0019775	Mtrex	100	83.461	Mus_spretus
ENSPLAG00000021311	mtrex	100	83.699	ENSMPUG00000007619	MTREX	100	83.603	Mustela_putorius_furo
ENSPLAG00000021311	mtrex	100	83.143	ENSMLUG00000001152	MTREX	100	83.143	Myotis_lucifugus
ENSPLAG00000021311	mtrex	100	83.588	ENSNGAG00000011938	Mtrex	100	83.699	Nannospalax_galili
ENSPLAG00000021311	mtrex	100	93.250	ENSNBRG00000011293	mtrex	100	93.250	Neolamprologus_brichardi
ENSPLAG00000021311	mtrex	100	79.734	ENSNLEG00000001494	MTREX	100	79.790	Nomascus_leucogenys
ENSPLAG00000021311	mtrex	83	94.118	ENSMEUG00000006496	-	83	94.118	Notamacropus_eugenii
ENSPLAG00000021311	mtrex	100	71.073	ENSOPRG00000008009	MTREX	100	71.169	Ochotona_princeps
ENSPLAG00000021311	mtrex	100	83.317	ENSODEG00000017234	MTREX	100	83.127	Octodon_degus
ENSPLAG00000021311	mtrex	100	93.153	ENSONIG00000007587	mtrex	100	93.153	Oreochromis_niloticus
ENSPLAG00000021311	mtrex	51	84.302	ENSOANG00000004885	-	99	84.139	Ornithorhynchus_anatinus
ENSPLAG00000021311	mtrex	100	84.211	ENSOCUG00000004463	MTREX	100	83.889	Oryctolagus_cuniculus
ENSPLAG00000021311	mtrex	100	93.057	ENSORLG00000005443	mtrex	100	93.057	Oryzias_latipes
ENSPLAG00000021311	mtrex	100	92.960	ENSORLG00020006329	mtrex	100	92.960	Oryzias_latipes_hni
ENSPLAG00000021311	mtrex	100	93.057	ENSORLG00015012924	mtrex	100	93.057	Oryzias_latipes_hsok
ENSPLAG00000021311	mtrex	100	92.878	ENSOMEG00000008825	mtrex	100	92.878	Oryzias_melastigma
ENSPLAG00000021311	mtrex	100	83.779	ENSOGAG00000002886	MTREX	100	83.889	Otolemur_garnettii
ENSPLAG00000021311	mtrex	100	83.365	ENSOARG00000007764	MTREX	100	83.175	Ovis_aries
ENSPLAG00000021311	mtrex	100	83.508	ENSPPAG00000039291	MTREX	100	83.572	Pan_paniscus
ENSPLAG00000021311	mtrex	100	83.699	ENSPPRG00000019701	MTREX	100	83.603	Panthera_pardus
ENSPLAG00000021311	mtrex	100	82.269	ENSPTIG00000009313	MTREX	100	82.173	Panthera_tigris_altaica
ENSPLAG00000021311	mtrex	100	83.508	ENSPTRG00000016878	MTREX	100	83.572	Pan_troglodytes
ENSPLAG00000021311	mtrex	100	83.508	ENSPANG00000009697	MTREX	100	83.572	Papio_anubis
ENSPLAG00000021311	mtrex	100	85.591	ENSPKIG00000020833	mtrex	100	85.399	Paramormyrops_kingsleyae
ENSPLAG00000021311	mtrex	100	84.504	ENSPSIG00000012150	MTREX	100	84.165	Pelodiscus_sinensis
ENSPLAG00000021311	mtrex	100	89.017	ENSPMGG00000002582	mtrex	100	89.017	Periophthalmus_magnuspinnatus
ENSPLAG00000021311	mtrex	95	65.420	ENSPMAG00000009668	mtrex	100	64.970	Petromyzon_marinus
ENSPLAG00000021311	mtrex	92	88.445	ENSPCIG00000024730	MTREX	100	88.340	Phascolarctos_cinereus
ENSPLAG00000021311	mtrex	76	99.746	ENSPFOG00000003141	mtrex	100	99.746	Poecilia_formosa
ENSPLAG00000021311	mtrex	95	96.462	ENSPMEG00000010597	mtrex	99	97.701	Poecilia_mexicana
ENSPLAG00000021311	mtrex	100	99.228	ENSPREG00000003089	mtrex	100	99.228	Poecilia_reticulata
ENSPLAG00000021311	mtrex	98	83.236	ENSPPYG00000015469	MTREX	98	83.301	Pongo_abelii
ENSPLAG00000021311	mtrex	94	73.488	ENSPCAG00000013120	MTREX	94	73.488	Procavia_capensis
ENSPLAG00000021311	mtrex	99	78.616	ENSPCOG00000018092	MTREX	100	78.288	Propithecus_coquereli
ENSPLAG00000021311	mtrex	100	83.603	ENSPVAG00000002445	MTREX	100	83.603	Pteropus_vampyrus
ENSPLAG00000021311	mtrex	100	93.346	ENSPNYG00000006164	mtrex	100	93.346	Pundamilia_nyererei
ENSPLAG00000021311	mtrex	100	87.199	ENSPNAG00000008794	mtrex	100	87.295	Pygocentrus_nattereri
ENSPLAG00000021311	mtrex	99	82.899	ENSRNOG00000010125	Mtrex	97	82.802	Rattus_norvegicus
ENSPLAG00000021311	mtrex	100	81.792	ENSRBIG00000034930	MTREX	100	81.697	Rhinopithecus_bieti
ENSPLAG00000021311	mtrex	100	83.508	ENSRROG00000039895	MTREX	100	83.413	Rhinopithecus_roxellana
ENSPLAG00000021311	mtrex	94	53.737	YJL050W	MTR4	95	52.585	Saccharomyces_cerevisiae
ENSPLAG00000021311	mtrex	100	83.603	ENSSBOG00000026693	MTREX	100	83.794	Saimiri_boliviensis_boliviensis
ENSPLAG00000021311	mtrex	95	86.802	ENSSHAG00000004600	MTREX	98	86.714	Sarcophilus_harrisii
ENSPLAG00000021311	mtrex	100	86.622	ENSSFOG00015014355	skiv2l2	100	86.429	Scleropages_formosus
ENSPLAG00000021311	mtrex	100	92.189	ENSSMAG00000007572	mtrex	100	92.189	Scophthalmus_maximus
ENSPLAG00000021311	mtrex	100	93.828	ENSSDUG00000023789	mtrex	100	93.828	Seriola_dumerili
ENSPLAG00000021311	mtrex	100	93.925	ENSSLDG00000006301	mtrex	100	93.925	Seriola_lalandi_dorsalis
ENSPLAG00000021311	mtrex	100	81.983	ENSSARG00000008387	MTREX	100	82.078	Sorex_araneus
ENSPLAG00000021311	mtrex	89	86.235	ENSSPUG00000007071	MTREX	96	86.235	Sphenodon_punctatus
ENSPLAG00000021311	mtrex	100	89.672	ENSSPAG00000011319	mtrex	100	89.210	Stegastes_partitus
ENSPLAG00000021311	mtrex	100	83.508	ENSSSCG00000016911	MTREX	100	83.603	Sus_scrofa
ENSPLAG00000021311	mtrex	100	82.404	ENSTGUG00000002480	MTREX	100	82.308	Taeniopygia_guttata
ENSPLAG00000021311	mtrex	100	90.743	ENSTRUG00000014571	mtrex	100	90.743	Takifugu_rubripes
ENSPLAG00000021311	mtrex	100	69.179	ENSTBEG00000007769	MTREX	100	69.209	Tupaia_belangeri
ENSPLAG00000021311	mtrex	100	84.019	ENSTTRG00000008678	MTREX	100	83.603	Tursiops_truncatus
ENSPLAG00000021311	mtrex	100	83.413	ENSUAMG00000023061	MTREX	100	83.413	Ursus_americanus
ENSPLAG00000021311	mtrex	100	83.542	ENSUMAG00000009373	MTREX	99	88.571	Ursus_maritimus
ENSPLAG00000021311	mtrex	100	74.547	ENSVPAG00000011174	MTREX	100	74.452	Vicugna_pacos
ENSPLAG00000021311	mtrex	100	83.699	ENSVVUG00000021337	MTREX	100	83.699	Vulpes_vulpes
ENSPLAG00000021311	mtrex	100	85.274	ENSXETG00000032798	MTREX	100	85.192	Xenopus_tropicalis
ENSPLAG00000021311	mtrex	100	97.973	ENSXMAG00000004799	mtrex	100	97.973	Xiphophorus_maculatus