EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000021401 (Gene tree)
Gene ID: 106940581
Gene Symbol: ptcd3
Alias: -
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 8454 bases
Position: chrKQ548550.1:1306-9759
Accession: 106940581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000017086	PPR	PF01535.20	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000031333	-	2207	XM_015023362	ENSPLAP00000017086	625 (aa)	XP_014878848	-

Gene Model

Click here to download ENSPLAG00000021401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000021401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000021401	ptcd3	92	70.358	ENSACIG00000022263	ptcd3	91	70.358	Amphilophus_citrinellus
ENSPLAG00000021401	ptcd3	100	70.080	ENSAOCG00000017186	ptcd3	88	69.760	Amphiprion_ocellaris
ENSPLAG00000021401	ptcd3	100	70.400	ENSAPEG00000016069	ptcd3	88	70.080	Amphiprion_percula
ENSPLAG00000021401	ptcd3	88	46.512	ENSAPLG00000005086	PTCD3	87	45.796	Anas_platyrhynchos
ENSPLAG00000021401	ptcd3	100	75.040	ENSACLG00000020653	ptcd3	90	75.040	Astatotilapia_calliptera
ENSPLAG00000021401	ptcd3	99	56.000	ENSAMXG00000011570	ptcd3	90	56.000	Astyanax_mexicanus
ENSPLAG00000021401	ptcd3	100	76.960	ENSCVAG00000020820	ptcd3	90	76.960	Cyprinodon_variegatus
ENSPLAG00000021401	ptcd3	87	78.285	ENSGAFG00000015291	ptcd3	85	77.920	Gambusia_affinis
ENSPLAG00000021401	ptcd3	100	75.360	ENSHBUG00000020056	ptcd3	90	75.360	Haplochromis_burtoni
ENSPLAG00000021401	ptcd3	100	67.834	ENSLBEG00000015349	ptcd3	90	67.834	Labrus_bergylta
ENSPLAG00000021401	ptcd3	100	75.200	ENSMZEG00005004980	ptcd3	90	75.200	Maylandia_zebra
ENSPLAG00000021401	ptcd3	92	44.178	ENSMGAG00000013124	PTCD3	88	44.178	Meleagris_gallopavo
ENSPLAG00000021401	ptcd3	100	70.064	ENSMALG00000013282	ptcd3	90	70.064	Monopterus_albus
ENSPLAG00000021401	ptcd3	91	69.877	ENSNBRG00000000447	ptcd3	90	69.877	Neolamprologus_brichardi
ENSPLAG00000021401	ptcd3	100	75.040	ENSONIG00000015886	ptcd3	90	75.040	Oreochromis_niloticus
ENSPLAG00000021401	ptcd3	100	73.120	ENSORLG00000008776	ptcd3	92	73.120	Oryzias_latipes
ENSPLAG00000021401	ptcd3	100	72.480	ENSORLG00020020676	ptcd3	89	72.480	Oryzias_latipes_hni
ENSPLAG00000021401	ptcd3	86	60.998	ENSORLG00015015978	ptcd3	87	60.998	Oryzias_latipes_hsok
ENSPLAG00000021401	ptcd3	100	91.040	ENSPFOG00000004442	ptcd3	92	91.040	Poecilia_formosa
ENSPLAG00000021401	ptcd3	89	85.331	ENSPMEG00000007153	ptcd3	94	84.221	Poecilia_mexicana
ENSPLAG00000021401	ptcd3	100	51.014	ENSSFOG00015019643	ptcd3	90	51.014	Scleropages_formosus
ENSPLAG00000021401	ptcd3	90	47.979	ENSTGUG00000010760	PTCD3	100	47.979	Taeniopygia_guttata
ENSPLAG00000021401	ptcd3	99	61.783	ENSTRUG00000003939	ptcd3	90	61.306	Takifugu_rubripes