EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000021432 (Gene tree)
Gene ID: 106962113
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 34812 bases
Position: chrKQ546688.1:82478-117289
Accession: 106962113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000017111	RRM_1	PF00076.22	6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000026258	SCAF8-201	5703	XM_015056300	ENSPLAP00000017111	1382 (aa)	XP_014911786	UPI00072DC000

Gene Model

Click here to download ENSPLAG00000021432's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000021432's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000021432	SCAF8	77	68.557	ENSG00000213079	SCAF8	85	69.051	Homo_sapiens
ENSPLAG00000021432	SCAF8	100	81.670	ENSAPOG00000015527	SCAF8	100	81.670	Acanthochromis_polyacanthus
ENSPLAG00000021432	SCAF8	77	67.067	ENSAMEG00000007583	SCAF8	83	67.668	Ailuropoda_melanoleuca
ENSPLAG00000021432	SCAF8	100	80.986	ENSAOCG00000002421	SCAF8	100	81.087	Amphiprion_ocellaris
ENSPLAG00000021432	SCAF8	98	72.073	ENSAPEG00000020115	SCAF8	68	66.062	Amphiprion_percula
ENSPLAG00000021432	SCAF8	77	82.597	ENSATEG00000006959	SCAF8	95	82.456	Anabas_testudineus
ENSPLAG00000021432	SCAF8	77	76.590	ENSAPLG00000005765	SCAF8	87	67.145	Anas_platyrhynchos
ENSPLAG00000021432	SCAF8	77	68.557	ENSANAG00000036184	SCAF8	85	69.051	Aotus_nancymaae
ENSPLAG00000021432	SCAF8	100	77.888	ENSACLG00000018828	SCAF8	100	77.305	Astatotilapia_calliptera
ENSPLAG00000021432	SCAF8	77	68.673	ENSBTAG00000031917	SCAF8	86	69.287	Bos_taurus
ENSPLAG00000021432	SCAF8	77	68.642	ENSCJAG00000012631	SCAF8	83	67.389	Callithrix_jacchus
ENSPLAG00000021432	SCAF8	77	68.664	ENSCAFG00000000570	SCAF8	85	69.288	Canis_familiaris
ENSPLAG00000021432	SCAF8	77	68.664	ENSCAFG00020015048	SCAF8	84	69.288	Canis_lupus_dingo
ENSPLAG00000021432	SCAF8	77	68.673	ENSCHIG00000025041	SCAF8	86	69.287	Capra_hircus
ENSPLAG00000021432	SCAF8	77	67.397	ENSTSYG00000010991	SCAF8	85	67.067	Carlito_syrichta
ENSPLAG00000021432	SCAF8	58	70.667	ENSCAPG00000003300	SCAF8	71	69.231	Cavia_aperea
ENSPLAG00000021432	SCAF8	77	59.803	ENSCPOG00000030311	-	54	54.830	Cavia_porcellus
ENSPLAG00000021432	SCAF8	77	56.824	ENSCPOG00000022216	-	86	57.940	Cavia_porcellus
ENSPLAG00000021432	SCAF8	77	68.434	ENSCCAG00000024952	SCAF8	85	69.051	Cebus_capucinus
ENSPLAG00000021432	SCAF8	77	68.681	ENSCATG00000035361	SCAF8	85	69.174	Cercocebus_atys
ENSPLAG00000021432	SCAF8	77	67.621	ENSCLAG00000004910	SCAF8	86	68.120	Chinchilla_lanigera
ENSPLAG00000021432	SCAF8	77	66.947	ENSCSAG00000013430	SCAF8	86	67.428	Chlorocebus_sabaeus
ENSPLAG00000021432	SCAF8	75	72.751	ENSCPBG00000016330	SCAF8	78	72.881	Chrysemys_picta_bellii
ENSPLAG00000021432	SCAF8	77	68.681	ENSCANG00000039499	SCAF8	85	69.039	Colobus_angolensis_palliatus
ENSPLAG00000021432	SCAF8	77	66.055	ENSCGRG00001020167	Scaf8	89	66.284	Cricetulus_griseus_chok1gshd
ENSPLAG00000021432	SCAF8	77	65.817	ENSCGRG00000004120	Scaf8	89	66.049	Cricetulus_griseus_crigri
ENSPLAG00000021432	SCAF8	100	74.752	ENSCSEG00000000043	-	100	73.885	Cynoglossus_semilaevis
ENSPLAG00000021432	SCAF8	96	85.063	ENSCVAG00000000925	SCAF8	99	84.839	Cyprinodon_variegatus
ENSPLAG00000021432	SCAF8	74	65.385	ENSDNOG00000025271	SCAF8	87	65.385	Dasypus_novemcinctus
ENSPLAG00000021432	SCAF8	77	69.030	ENSDORG00000006391	Scaf8	86	69.279	Dipodomys_ordii
ENSPLAG00000021432	SCAF8	77	68.719	ENSEASG00005018879	SCAF8	86	69.335	Equus_asinus_asinus
ENSPLAG00000021432	SCAF8	77	68.927	ENSECAG00000005540	SCAF8	86	69.544	Equus_caballus
ENSPLAG00000021432	SCAF8	76	71.416	ENSELUG00000002779	SCAF8	100	62.057	Esox_lucius
ENSPLAG00000021432	SCAF8	77	70.200	ENSFCAG00000023424	SCAF8	85	70.324	Felis_catus
ENSPLAG00000021432	SCAF8	71	76.411	ENSFALG00000012433	SCAF8	85	68.519	Ficedula_albicollis
ENSPLAG00000021432	SCAF8	77	68.000	ENSFDAG00000010335	SCAF8	91	68.025	Fukomys_damarensis
ENSPLAG00000021432	SCAF8	100	89.105	ENSFHEG00000008284	SCAF8	100	89.538	Fundulus_heteroclitus
ENSPLAG00000021432	SCAF8	64	78.219	ENSGMOG00000018812	SCAF8	83	77.790	Gadus_morhua
ENSPLAG00000021432	SCAF8	75	72.229	ENSGALG00000013635	SCAF8	81	71.838	Gallus_gallus
ENSPLAG00000021432	SCAF8	100	95.235	ENSGAFG00000018033	SCAF8	100	95.740	Gambusia_affinis
ENSPLAG00000021432	SCAF8	77	78.654	ENSGACG00000006909	SCAF8	99	78.400	Gasterosteus_aculeatus
ENSPLAG00000021432	SCAF8	77	68.557	ENSGGOG00000008645	SCAF8	85	69.051	Gorilla_gorilla
ENSPLAG00000021432	SCAF8	100	77.888	ENSHBUG00000019537	SCAF8	100	77.163	Haplochromis_burtoni
ENSPLAG00000021432	SCAF8	77	67.901	ENSHGLG00000003619	SCAF8	86	68.395	Heterocephalus_glaber_female
ENSPLAG00000021432	SCAF8	77	67.750	ENSHGLG00100004708	SCAF8	91	68.250	Heterocephalus_glaber_male
ENSPLAG00000021432	SCAF8	77	68.625	ENSSTOG00000026043	SCAF8	85	69.125	Ictidomys_tridecemlineatus
ENSPLAG00000021432	SCAF8	77	68.244	ENSJJAG00000020480	Scaf8	85	68.867	Jaculus_jaculus
ENSPLAG00000021432	SCAF8	100	82.727	ENSKMAG00000012767	SCAF8	100	82.512	Kryptolebias_marmoratus
ENSPLAG00000021432	SCAF8	83	95.522	ENSLBEG00000012484	-	92	92.617	Labrus_bergylta
ENSPLAG00000021432	SCAF8	78	64.192	ENSLOCG00000016856	SCAF8	92	64.721	Lepisosteus_oculatus
ENSPLAG00000021432	SCAF8	75	71.503	ENSLAFG00000000022	SCAF8	86	68.842	Loxodonta_africana
ENSPLAG00000021432	SCAF8	77	68.681	ENSMFAG00000032738	SCAF8	85	69.174	Macaca_fascicularis
ENSPLAG00000021432	SCAF8	77	68.681	ENSMMUG00000015163	SCAF8	85	69.174	Macaca_mulatta
ENSPLAG00000021432	SCAF8	77	68.681	ENSMNEG00000043466	SCAF8	85	69.174	Macaca_nemestrina
ENSPLAG00000021432	SCAF8	77	68.664	ENSMLEG00000034845	SCAF8	85	69.164	Mandrillus_leucophaeus
ENSPLAG00000021432	SCAF8	97	75.492	ENSMAMG00000009457	SCAF8	100	75.492	Mastacembelus_armatus
ENSPLAG00000021432	SCAF8	100	77.817	ENSMZEG00005005698	SCAF8	100	77.234	Maylandia_zebra
ENSPLAG00000021432	SCAF8	75	71.484	ENSMGAG00000012762	SCAF8	93	68.850	Meleagris_gallopavo
ENSPLAG00000021432	SCAF8	77	66.125	ENSMAUG00000009513	Scaf8	89	66.357	Mesocricetus_auratus
ENSPLAG00000021432	SCAF8	77	65.596	ENSMICG00000028965	SCAF8	89	65.940	Microcebus_murinus
ENSPLAG00000021432	SCAF8	77	65.826	ENSMOCG00000014950	Scaf8	89	66.055	Microtus_ochrogaster
ENSPLAG00000021432	SCAF8	98	73.570	ENSMMOG00000002216	SCAF8	99	72.991	Mola_mola
ENSPLAG00000021432	SCAF8	77	69.625	ENSMODG00000008301	SCAF8	85	69.875	Monodelphis_domestica
ENSPLAG00000021432	SCAF8	100	78.258	ENSMALG00000011584	SCAF8	100	78.014	Monopterus_albus
ENSPLAG00000021432	SCAF8	77	65.367	MGP_CAROLIEiJ_G0021016	Scaf8	92	68.758	Mus_caroli
ENSPLAG00000021432	SCAF8	77	65.367	ENSMUSG00000046201	Scaf8	90	65.826	Mus_musculus
ENSPLAG00000021432	SCAF8	77	65.826	MGP_PahariEiJ_G0023334	Scaf8	93	66.284	Mus_pahari
ENSPLAG00000021432	SCAF8	77	66.707	ENSMPUG00000001974	SCAF8	86	67.308	Mustela_putorius_furo
ENSPLAG00000021432	SCAF8	77	64.679	ENSMLUG00000029190	SCAF8	90	68.519	Myotis_lucifugus
ENSPLAG00000021432	SCAF8	77	68.512	ENSNGAG00000012332	Scaf8	86	69.004	Nannospalax_galili
ENSPLAG00000021432	SCAF8	82	80.018	ENSNBRG00000009067	SCAF8	99	80.018	Neolamprologus_brichardi
ENSPLAG00000021432	SCAF8	77	66.708	ENSNLEG00000015509	SCAF8	85	67.040	Nomascus_leucogenys
ENSPLAG00000021432	SCAF8	52	74.227	ENSOPRG00000018413	-	66	74.227	Ochotona_princeps
ENSPLAG00000021432	SCAF8	77	68.187	ENSODEG00000007296	SCAF8	91	68.681	Octodon_degus
ENSPLAG00000021432	SCAF8	82	84.296	ENSONIG00000008119	SCAF8	98	82.127	Oreochromis_niloticus
ENSPLAG00000021432	SCAF8	77	68.750	ENSOCUG00000026063	SCAF8	85	69.250	Oryctolagus_cuniculus
ENSPLAG00000021432	SCAF8	100	76.754	ENSORLG00000017358	SCAF8	100	75.904	Oryzias_latipes
ENSPLAG00000021432	SCAF8	100	76.541	ENSORLG00020002214	SCAF8	100	75.691	Oryzias_latipes_hni
ENSPLAG00000021432	SCAF8	100	76.754	ENSORLG00015015779	SCAF8	100	76.471	Oryzias_latipes_hsok
ENSPLAG00000021432	SCAF8	100	78.196	ENSOMEG00000015471	SCAF8	100	78.094	Oryzias_melastigma
ENSPLAG00000021432	SCAF8	77	63.728	ENSOGAG00000034223	SCAF8	86	64.094	Otolemur_garnettii
ENSPLAG00000021432	SCAF8	77	68.571	ENSOARG00000004159	SCAF8	86	69.193	Ovis_aries
ENSPLAG00000021432	SCAF8	77	68.557	ENSPPAG00000039826	SCAF8	85	69.051	Pan_paniscus
ENSPLAG00000021432	SCAF8	77	69.297	ENSPPRG00000023175	SCAF8	85	69.914	Panthera_pardus
ENSPLAG00000021432	SCAF8	77	69.164	ENSPTIG00000014836	SCAF8	85	69.788	Panthera_tigris_altaica
ENSPLAG00000021432	SCAF8	77	68.681	ENSPTRG00000018727	SCAF8	85	69.174	Pan_troglodytes
ENSPLAG00000021432	SCAF8	77	68.681	ENSPANG00000017489	SCAF8	85	66.338	Papio_anubis
ENSPLAG00000021432	SCAF8	78	69.830	ENSPKIG00000021212	SCAF8	93	70.287	Paramormyrops_kingsleyae
ENSPLAG00000021432	SCAF8	65	68.218	ENSPSIG00000008614	SCAF8	70	65.564	Pelodiscus_sinensis
ENSPLAG00000021432	SCAF8	77	65.313	ENSPEMG00000010531	Scaf8	89	65.545	Peromyscus_maniculatus_bairdii
ENSPLAG00000021432	SCAF8	77	70.123	ENSPCIG00000001141	SCAF8	85	70.370	Phascolarctos_cinereus
ENSPLAG00000021432	SCAF8	100	99.566	ENSPFOG00000004176	SCAF8	100	99.566	Poecilia_formosa
ENSPLAG00000021432	SCAF8	100	98.842	ENSPMEG00000007591	SCAF8	100	98.842	Poecilia_mexicana
ENSPLAG00000021432	SCAF8	100	98.046	ENSPREG00000000652	SCAF8	100	98.046	Poecilia_reticulata
ENSPLAG00000021432	SCAF8	77	67.405	ENSPPYG00000017121	SCAF8	85	67.528	Pongo_abelii
ENSPLAG00000021432	SCAF8	64	79.933	ENSPCAG00000013044	SCAF8	80	80.100	Procavia_capensis
ENSPLAG00000021432	SCAF8	77	65.711	ENSPCOG00000002067	SCAF8	88	66.009	Propithecus_coquereli
ENSPLAG00000021432	SCAF8	77	68.781	ENSPVAG00000005582	SCAF8	87	69.317	Pteropus_vampyrus
ENSPLAG00000021432	SCAF8	100	77.888	ENSPNYG00000007277	SCAF8	100	77.305	Pundamilia_nyererei
ENSPLAG00000021432	SCAF8	81	71.599	ENSPNAG00000024740	SCAF8	86	72.743	Pygocentrus_nattereri
ENSPLAG00000021432	SCAF8	77	65.596	ENSRNOG00000016919	Scaf8	93	66.170	Rattus_norvegicus
ENSPLAG00000021432	SCAF8	77	68.681	ENSRBIG00000035769	SCAF8	85	69.174	Rhinopithecus_bieti
ENSPLAG00000021432	SCAF8	77	68.681	ENSRROG00000013580	SCAF8	85	69.174	Rhinopithecus_roxellana
ENSPLAG00000021432	SCAF8	77	68.557	ENSSBOG00000027023	SCAF8	92	69.051	Saimiri_boliviensis_boliviensis
ENSPLAG00000021432	SCAF8	77	69.136	ENSSHAG00000009915	SCAF8	86	69.506	Sarcophilus_harrisii
ENSPLAG00000021432	SCAF8	77	64.211	ENSSFOG00015009481	SCAF8	56	54.959	Scleropages_formosus
ENSPLAG00000021432	SCAF8	77	84.995	ENSSMAG00000008275	SCAF8	100	75.970	Scophthalmus_maximus
ENSPLAG00000021432	SCAF8	75	72.906	ENSSPUG00000015219	SCAF8	82	69.851	Sphenodon_punctatus
ENSPLAG00000021432	SCAF8	77	66.510	ENSSSCG00000004070	SCAF8	86	69.420	Sus_scrofa
ENSPLAG00000021432	SCAF8	77	69.260	ENSTGUG00000011151	SCAF8	93	69.636	Taeniopygia_guttata
ENSPLAG00000021432	SCAF8	100	72.933	ENSTRUG00000009243	SCAF8	100	71.884	Takifugu_rubripes
ENSPLAG00000021432	SCAF8	77	78.818	ENSTNIG00000016885	SCAF8	99	78.611	Tetraodon_nigroviridis
ENSPLAG00000021432	SCAF8	77	66.916	ENSTTRG00000014538	SCAF8	86	68.040	Tursiops_truncatus
ENSPLAG00000021432	SCAF8	77	68.966	ENSUAMG00000024736	SCAF8	85	69.451	Ursus_americanus
ENSPLAG00000021432	SCAF8	76	68.615	ENSUMAG00000013404	SCAF8	85	69.250	Ursus_maritimus
ENSPLAG00000021432	SCAF8	56	60.000	ENSVPAG00000012465	SCAF8	84	86.036	Vicugna_pacos
ENSPLAG00000021432	SCAF8	77	68.664	ENSVVUG00000007532	SCAF8	86	69.084	Vulpes_vulpes
ENSPLAG00000021432	SCAF8	71	69.364	ENSXETG00000013132	scaf8	80	66.758	Xenopus_tropicalis
ENSPLAG00000021432	SCAF8	100	96.816	ENSXMAG00000019192	SCAF8	100	96.816	Xiphophorus_maculatus