EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000021992 (Gene tree)
Gene ID: 106953367
Gene Symbol: srrt
Alias: -
Full Name: serrate%2C RNA effector molecule
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 8447 bases
Position: chrKQ545891.1:244196-252642
Accession: 106953367
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000017464	ARS2	PF04959.13	2.3e-88	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000026701	-	2652	XM_015042077	ENSPLAP00000017464	883 (aa)	XP_014897563	-

Gene Model

Click here to download ENSPLAG00000021992's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000021992's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000021992	srrt	51	75.328	ENSG00000087087	SRRT	98	85.484	Homo_sapiens
ENSPLAG00000021992	srrt	95	87.647	ENSAPOG00000002304	srrt	95	87.412	Acanthochromis_polyacanthus
ENSPLAG00000021992	srrt	96	63.073	ENSAMEG00000014506	SRRT	95	63.109	Ailuropoda_melanoleuca
ENSPLAG00000021992	srrt	83	90.789	ENSACIG00000015795	srrt	95	89.749	Amphilophus_citrinellus
ENSPLAG00000021992	srrt	93	55.858	ENSAOCG00000009189	-	94	57.429	Amphiprion_ocellaris
ENSPLAG00000021992	srrt	95	87.500	ENSAOCG00000009693	srrt	95	87.264	Amphiprion_ocellaris
ENSPLAG00000021992	srrt	93	55.858	ENSAPEG00000020016	-	94	57.429	Amphiprion_percula
ENSPLAG00000021992	srrt	95	87.028	ENSAPEG00000003646	srrt	92	91.102	Amphiprion_percula
ENSPLAG00000021992	srrt	95	85.124	ENSATEG00000014425	srrt	95	85.714	Anabas_testudineus
ENSPLAG00000021992	srrt	52	64.092	ENSATEG00000003652	-	85	66.810	Anabas_testudineus
ENSPLAG00000021992	srrt	52	75.000	ENSACAG00000001014	SRRT	95	64.353	Anolis_carolinensis
ENSPLAG00000021992	srrt	51	74.194	ENSANAG00000031718	SRRT	95	63.584	Aotus_nancymaae
ENSPLAG00000021992	srrt	95	84.434	ENSACLG00000013156	srrt	92	84.906	Astatotilapia_calliptera
ENSPLAG00000021992	srrt	51	65.665	ENSACLG00000009423	-	94	57.143	Astatotilapia_calliptera
ENSPLAG00000021992	srrt	96	61.301	ENSBTAG00000001134	SRRT	95	63.079	Bos_taurus
ENSPLAG00000021992	srrt	61	45.833	WBGene00017085	E01A2.2	85	42.437	Caenorhabditis_elegans
ENSPLAG00000021992	srrt	51	73.548	ENSCJAG00000014917	SRRT	95	63.584	Callithrix_jacchus
ENSPLAG00000021992	srrt	96	62.671	ENSCAFG00000023538	SRRT	53	73.763	Canis_familiaris
ENSPLAG00000021992	srrt	98	62.444	ENSCAFG00020013358	SRRT	99	60.870	Canis_lupus_dingo
ENSPLAG00000021992	srrt	87	74.082	ENSCHIG00000010495	SRRT	95	63.341	Capra_hircus
ENSPLAG00000021992	srrt	51	74.242	ENSTSYG00000036426	SRRT	99	62.065	Carlito_syrichta
ENSPLAG00000021992	srrt	51	75.385	ENSCAPG00000013586	SRRT	99	63.446	Cavia_aperea
ENSPLAG00000021992	srrt	96	64.220	ENSCPOG00000001739	SRRT	95	63.741	Cavia_porcellus
ENSPLAG00000021992	srrt	51	74.194	ENSCCAG00000015877	SRRT	95	63.584	Cebus_capucinus
ENSPLAG00000021992	srrt	51	74.242	ENSCATG00000036306	SRRT	97	62.772	Cercocebus_atys
ENSPLAG00000021992	srrt	51	74.194	ENSCLAG00000007568	SRRT	89	70.664	Chinchilla_lanigera
ENSPLAG00000021992	srrt	51	74.194	ENSCSAG00000017996	SRRT	95	63.468	Chlorocebus_sabaeus
ENSPLAG00000021992	srrt	50	74.074	ENSCHOG00000007815	SRRT	62	73.529	Choloepus_hoffmanni
ENSPLAG00000021992	srrt	72	67.925	ENSCPBG00000011553	SRRT	84	63.345	Chrysemys_picta_bellii
ENSPLAG00000021992	srrt	100	40.753	ENSCING00000003506	-	54	50.208	Ciona_intestinalis
ENSPLAG00000021992	srrt	100	43.045	ENSCSAVG00000008394	-	81	56.734	Ciona_savignyi
ENSPLAG00000021992	srrt	51	74.459	ENSCANG00000034556	SRRT	95	63.573	Colobus_angolensis_palliatus
ENSPLAG00000021992	srrt	96	64.212	ENSCGRG00001001594	Srrt	95	63.657	Cricetulus_griseus_chok1gshd
ENSPLAG00000021992	srrt	96	59.816	ENSCGRG00000007292	Srrt	89	70.878	Cricetulus_griseus_crigri
ENSPLAG00000021992	srrt	73	64.668	ENSCSEG00000005233	-	78	65.284	Cynoglossus_semilaevis
ENSPLAG00000021992	srrt	98	75.854	ENSCSEG00000017878	srrt	95	76.079	Cynoglossus_semilaevis
ENSPLAG00000021992	srrt	90	55.791	ENSCVAG00000017344	-	94	56.127	Cyprinodon_variegatus
ENSPLAG00000021992	srrt	95	89.387	ENSCVAG00000019848	srrt	95	90.212	Cyprinodon_variegatus
ENSPLAG00000021992	srrt	96	78.037	ENSDARG00000017762	srrt	95	77.986	Danio_rerio
ENSPLAG00000021992	srrt	51	74.194	ENSDNOG00000003851	SRRT	95	63.542	Dasypus_novemcinctus
ENSPLAG00000021992	srrt	51	74.620	ENSDORG00000005584	Srrt	89	71.490	Dipodomys_ordii
ENSPLAG00000021992	srrt	100	40.140	FBgn0033062	Ars2	79	53.433	Drosophila_melanogaster
ENSPLAG00000021992	srrt	60	62.609	ENSEBUG00000008517	-	76	62.609	Eptatretus_burgeri
ENSPLAG00000021992	srrt	51	74.194	ENSEASG00005016956	SRRT	95	63.773	Equus_asinus_asinus
ENSPLAG00000021992	srrt	51	74.194	ENSECAG00000012292	SRRT	95	63.773	Equus_caballus
ENSPLAG00000021992	srrt	81	77.083	ENSEEUG00000009117	SRRT	81	77.174	Erinaceus_europaeus
ENSPLAG00000021992	srrt	96	73.072	ENSELUG00000006651	srrt	95	73.227	Esox_lucius
ENSPLAG00000021992	srrt	93	58.824	ENSELUG00000021216	-	94	58.121	Esox_lucius
ENSPLAG00000021992	srrt	96	61.416	ENSFCAG00000006855	SRRT	95	63.657	Felis_catus
ENSPLAG00000021992	srrt	51	72.383	ENSFDAG00000021347	SRRT	95	63.133	Fukomys_damarensis
ENSPLAG00000021992	srrt	52	57.143	ENSFHEG00000004105	-	93	57.113	Fundulus_heteroclitus
ENSPLAG00000021992	srrt	75	96.032	ENSFHEG00000002756	srrt	90	96.032	Fundulus_heteroclitus
ENSPLAG00000021992	srrt	65	66.140	ENSGMOG00000018694	-	78	65.914	Gadus_morhua
ENSPLAG00000021992	srrt	96	73.498	ENSGMOG00000018619	srrt	93	72.662	Gadus_morhua
ENSPLAG00000021992	srrt	74	63.696	ENSGAFG00000020383	-	94	54.888	Gambusia_affinis
ENSPLAG00000021992	srrt	100	95.941	ENSGAFG00000005423	srrt	100	95.941	Gambusia_affinis
ENSPLAG00000021992	srrt	96	83.743	ENSGACG00000020387	srrt	95	83.451	Gasterosteus_aculeatus
ENSPLAG00000021992	srrt	93	54.893	ENSGACG00000001100	-	94	55.542	Gasterosteus_aculeatus
ENSPLAG00000021992	srrt	51	74.459	ENSGGOG00000001508	SRRT	96	63.805	Gorilla_gorilla
ENSPLAG00000021992	srrt	95	83.608	ENSHBUG00000002942	srrt	92	85.024	Haplochromis_burtoni
ENSPLAG00000021992	srrt	96	63.490	ENSHGLG00000008344	Srrt	89	70.450	Heterocephalus_glaber_female
ENSPLAG00000021992	srrt	96	63.741	ENSHGLG00100018857	Srrt	89	71.212	Heterocephalus_glaber_male
ENSPLAG00000021992	srrt	93	54.172	ENSHCOG00000008904	-	90	63.355	Hippocampus_comes
ENSPLAG00000021992	srrt	98	80.530	ENSHCOG00000005403	srrt	95	80.024	Hippocampus_comes
ENSPLAG00000021992	srrt	93	73.798	ENSIPUG00000021150	srrt	95	74.035	Ictalurus_punctatus
ENSPLAG00000021992	srrt	96	63.720	ENSSTOG00000013776	SRRT	95	63.805	Ictidomys_tridecemlineatus
ENSPLAG00000021992	srrt	96	63.879	ENSJJAG00000010446	Srrt	89	71.429	Jaculus_jaculus
ENSPLAG00000021992	srrt	51	63.941	ENSKMAG00000008468	-	94	54.918	Kryptolebias_marmoratus
ENSPLAG00000021992	srrt	95	84.434	ENSKMAG00000013599	srrt	95	85.731	Kryptolebias_marmoratus
ENSPLAG00000021992	srrt	98	79.200	ENSLBEG00000016308	srrt	86	90.441	Labrus_bergylta
ENSPLAG00000021992	srrt	95	55.309	ENSLACG00000001089	SRRT	95	55.828	Latimeria_chalumnae
ENSPLAG00000021992	srrt	91	56.159	ENSLOCG00000013658	srrt	78	81.308	Lepisosteus_oculatus
ENSPLAG00000021992	srrt	51	74.409	ENSLAFG00000007725	SRRT	95	63.889	Loxodonta_africana
ENSPLAG00000021992	srrt	51	74.459	ENSMFAG00000033745	SRRT	99	62.772	Macaca_fascicularis
ENSPLAG00000021992	srrt	96	62.896	ENSMMUG00000021255	SRRT	95	63.468	Macaca_mulatta
ENSPLAG00000021992	srrt	51	74.194	ENSMNEG00000041864	SRRT	97	62.772	Macaca_nemestrina
ENSPLAG00000021992	srrt	51	74.459	ENSMLEG00000029479	SRRT	98	62.772	Mandrillus_leucophaeus
ENSPLAG00000021992	srrt	87	55.371	ENSMAMG00000010681	-	94	57.801	Mastacembelus_armatus
ENSPLAG00000021992	srrt	95	85.714	ENSMAMG00000014311	srrt	95	86.187	Mastacembelus_armatus
ENSPLAG00000021992	srrt	95	83.608	ENSMZEG00005016135	srrt	92	85.024	Maylandia_zebra
ENSPLAG00000021992	srrt	51	65.880	ENSMZEG00005028002	-	94	57.260	Maylandia_zebra
ENSPLAG00000021992	srrt	51	73.763	ENSMAUG00000011386	Srrt	89	70.426	Mesocricetus_auratus
ENSPLAG00000021992	srrt	51	74.194	ENSMICG00000009471	SRRT	97	62.486	Microcebus_murinus
ENSPLAG00000021992	srrt	51	74.194	ENSMOCG00000001971	Srrt	89	70.042	Microtus_ochrogaster
ENSPLAG00000021992	srrt	83	55.762	ENSMMOG00000011137	-	55	67.245	Mola_mola
ENSPLAG00000021992	srrt	51	70.940	ENSMODG00000004862	SRRT	89	71.154	Monodelphis_domestica
ENSPLAG00000021992	srrt	90	79.602	ENSMALG00000018604	srrt	99	77.143	Monopterus_albus
ENSPLAG00000021992	srrt	56	51.210	ENSMALG00000005567	-	84	55.111	Monopterus_albus
ENSPLAG00000021992	srrt	96	64.726	MGP_CAROLIEiJ_G0027870	Srrt	99	71.910	Mus_caroli
ENSPLAG00000021992	srrt	96	64.726	ENSMUSG00000037364	Srrt	99	71.910	Mus_musculus
ENSPLAG00000021992	srrt	96	65.146	MGP_PahariEiJ_G0024456	Srrt	99	71.910	Mus_pahari
ENSPLAG00000021992	srrt	96	64.726	MGP_SPRETEiJ_G0028875	Srrt	99	71.910	Mus_spretus
ENSPLAG00000021992	srrt	96	63.014	ENSMPUG00000015839	SRRT	95	63.542	Mustela_putorius_furo
ENSPLAG00000021992	srrt	51	73.978	ENSMLUG00000009975	SRRT	95	63.468	Myotis_lucifugus
ENSPLAG00000021992	srrt	96	64.393	ENSNGAG00000023715	Srrt	100	61.780	Nannospalax_galili
ENSPLAG00000021992	srrt	81	64.537	ENSNLEG00000011987	SRRT	99	56.374	Nomascus_leucogenys
ENSPLAG00000021992	srrt	96	53.882	ENSMEUG00000011941	SRRT	94	53.546	Notamacropus_eugenii
ENSPLAG00000021992	srrt	60	73.485	ENSOPRG00000002502	-	67	75.000	Ochotona_princeps
ENSPLAG00000021992	srrt	51	75.604	ENSODEG00000016856	SRRT	89	71.429	Octodon_degus
ENSPLAG00000021992	srrt	95	82.921	ENSONIG00000004242	srrt	95	82.319	Oreochromis_niloticus
ENSPLAG00000021992	srrt	93	56.789	ENSONIG00000016080	-	94	57.491	Oreochromis_niloticus
ENSPLAG00000021992	srrt	98	83.525	ENSORLG00000008120	srrt	95	82.999	Oryzias_latipes
ENSPLAG00000021992	srrt	98	83.180	ENSORLG00020003058	srrt	95	82.763	Oryzias_latipes_hni
ENSPLAG00000021992	srrt	98	83.410	ENSORLG00015008062	srrt	95	82.645	Oryzias_latipes_hsok
ENSPLAG00000021992	srrt	98	83.295	ENSOMEG00000003155	srrt	90	89.278	Oryzias_melastigma
ENSPLAG00000021992	srrt	93	57.863	ENSOMEG00000006963	-	94	57.583	Oryzias_melastigma
ENSPLAG00000021992	srrt	51	74.194	ENSOGAG00000017242	SRRT	95	63.699	Otolemur_garnettii
ENSPLAG00000021992	srrt	51	74.026	ENSOARG00000015645	SRRT	95	63.298	Ovis_aries
ENSPLAG00000021992	srrt	51	74.459	ENSPPAG00000041090	SRRT	97	62.014	Pan_paniscus
ENSPLAG00000021992	srrt	96	61.397	ENSPPRG00000009557	SRRT	95	63.647	Panthera_pardus
ENSPLAG00000021992	srrt	96	62.857	ENSPTIG00000014355	SRRT	95	63.773	Panthera_tigris_altaica
ENSPLAG00000021992	srrt	51	74.459	ENSPTRG00000019511	SRRT	99	61.369	Pan_troglodytes
ENSPLAG00000021992	srrt	51	72.727	ENSPANG00000020763	SRRT	96	62.772	Papio_anubis
ENSPLAG00000021992	srrt	98	74.292	ENSPKIG00000005434	srrt	95	73.979	Paramormyrops_kingsleyae
ENSPLAG00000021992	srrt	94	69.441	ENSPKIG00000022212	-	95	69.637	Paramormyrops_kingsleyae
ENSPLAG00000021992	srrt	51	75.717	ENSPSIG00000016311	SRRT	95	65.135	Pelodiscus_sinensis
ENSPLAG00000021992	srrt	98	77.765	ENSPMGG00000002841	srrt	56	86.452	Periophthalmus_magnuspinnatus
ENSPLAG00000021992	srrt	96	64.610	ENSPEMG00000010834	Srrt	89	71.212	Peromyscus_maniculatus_bairdii
ENSPLAG00000021992	srrt	96	53.952	ENSPMAG00000009614	-	55	63.002	Petromyzon_marinus
ENSPLAG00000021992	srrt	96	63.091	ENSPCIG00000000816	SRRT	95	62.688	Phascolarctos_cinereus
ENSPLAG00000021992	srrt	100	97.858	ENSPFOG00000005704	srrt	100	97.858	Poecilia_formosa
ENSPLAG00000021992	srrt	100	97.407	ENSPMEG00000001182	srrt	98	99.603	Poecilia_mexicana
ENSPLAG00000021992	srrt	100	96.956	ENSPREG00000022308	srrt	100	96.956	Poecilia_reticulata
ENSPLAG00000021992	srrt	51	57.143	ENSPPYG00000017432	SRRT	95	54.167	Pongo_abelii
ENSPLAG00000021992	srrt	51	72.304	ENSPCAG00000001621	SRRT	53	72.304	Procavia_capensis
ENSPLAG00000021992	srrt	51	74.459	ENSPCOG00000025751	SRRT	95	63.182	Propithecus_coquereli
ENSPLAG00000021992	srrt	67	66.022	ENSPVAG00000000834	SRRT	100	55.134	Pteropus_vampyrus
ENSPLAG00000021992	srrt	95	83.491	ENSPNYG00000018710	srrt	95	84.906	Pundamilia_nyererei
ENSPLAG00000021992	srrt	96	59.001	ENSPNAG00000010629	srrt	94	61.182	Pygocentrus_nattereri
ENSPLAG00000021992	srrt	51	64.629	ENSRNOG00000048277	AABR07035787.1	92	64.629	Rattus_norvegicus
ENSPLAG00000021992	srrt	51	74.194	ENSRBIG00000035718	SRRT	97	62.772	Rhinopithecus_bieti
ENSPLAG00000021992	srrt	51	74.194	ENSRROG00000030622	SRRT	98	62.772	Rhinopithecus_roxellana
ENSPLAG00000021992	srrt	51	74.459	ENSSBOG00000033570	SRRT	96	63.689	Saimiri_boliviensis_boliviensis
ENSPLAG00000021992	srrt	72	58.904	ENSSHAG00000007349	-	99	59.209	Sarcophilus_harrisii
ENSPLAG00000021992	srrt	94	76.100	ENSSFOG00015017293	srrt	95	76.202	Scleropages_formosus
ENSPLAG00000021992	srrt	95	86.305	ENSSMAG00000015342	srrt	95	85.832	Scophthalmus_maximus
ENSPLAG00000021992	srrt	51	64.579	ENSSMAG00000018195	-	94	53.710	Scophthalmus_maximus
ENSPLAG00000021992	srrt	95	88.312	ENSSDUG00000012049	srrt	95	85.006	Seriola_dumerili
ENSPLAG00000021992	srrt	51	55.202	ENSSDUG00000002051	-	93	56.438	Seriola_dumerili
ENSPLAG00000021992	srrt	82	91.912	ENSSLDG00000017477	srrt	87	91.912	Seriola_lalandi_dorsalis
ENSPLAG00000021992	srrt	95	85.546	ENSSPAG00000005665	srrt	94	86.369	Stegastes_partitus
ENSPLAG00000021992	srrt	51	59.737	ENSSPAG00000018943	-	93	59.170	Stegastes_partitus
ENSPLAG00000021992	srrt	98	80.229	ENSTRUG00000016075	srrt	95	80.679	Takifugu_rubripes
ENSPLAG00000021992	srrt	74	75.407	ENSTNIG00000011779	srrt	100	70.963	Tetraodon_nigroviridis
ENSPLAG00000021992	srrt	54	62.963	ENSTNIG00000003111	-	53	63.974	Tetraodon_nigroviridis
ENSPLAG00000021992	srrt	58	77.401	ENSTBEG00000005212	SRRT	57	77.401	Tupaia_belangeri
ENSPLAG00000021992	srrt	51	73.978	ENSTTRG00000011104	SRRT	95	63.426	Tursiops_truncatus
ENSPLAG00000021992	srrt	96	61.397	ENSUAMG00000027997	SRRT	98	63.657	Ursus_americanus
ENSPLAG00000021992	srrt	96	61.530	ENSUMAG00000011295	SRRT	95	63.657	Ursus_maritimus
ENSPLAG00000021992	srrt	96	62.671	ENSVVUG00000023572	SRRT	53	73.763	Vulpes_vulpes
ENSPLAG00000021992	srrt	71	76.404	ENSXETG00000025124	srrt	72	76.433	Xenopus_tropicalis
ENSPLAG00000021992	srrt	53	52.542	ENSXCOG00000013105	-	91	53.664	Xiphophorus_couchianus
ENSPLAG00000021992	srrt	100	96.167	ENSXMAG00000007627	srrt	100	96.167	Xiphophorus_maculatus