EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000022088 (Gene tree)
Gene ID: 106962104
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 34-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 4743 bases
Position: chrKQ546686.1:189288-194030
Accession: 106962104
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000030736	zf-C2H2	PF00096.26	7.1e-18	1	3
ENSPLAP00000030736	zf-C2H2	PF00096.26	7.1e-18	2	3
ENSPLAP00000030736	zf-C2H2	PF00096.26	7.1e-18	3	3
ENSPLAP00000030736	zf-met	PF12874.7	0.00025	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000026937	-	2424	XM_015056283	ENSPLAP00000030736	671 (aa)	XP_014911769	UPI00072D985A

Gene Model

Click here to download ENSPLAG00000022088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000022088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000022088	-	61	34.066	ENSPLAG00000009568	-	93	35.165
ENSPLAG00000022088	-	90	38.073	ENSPLAG00000022076	-	98	38.073
ENSPLAG00000022088	-	57	33.696	ENSPLAG00000004443	-	71	33.696
ENSPLAG00000022088	-	93	37.113	ENSPLAG00000001279	-	94	37.113
ENSPLAG00000022088	-	57	36.239	ENSPLAG00000006864	-	70	41.096
ENSPLAG00000022088	-	92	37.443	ENSPLAG00000000470	-	98	37.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000022088	-	94	95.701	ENSGAFG00000016139	-	100	95.701	Gambusia_affinis
ENSPLAG00000022088	-	51	62.281	ENSMALG00000014761	-	99	62.281	Monopterus_albus
ENSPLAG00000022088	-	93	62.041	ENSORLG00000014311	-	99	62.041	Oryzias_latipes
ENSPLAG00000022088	-	93	62.360	ENSORLG00020016116	-	99	62.360	Oryzias_latipes_hni
ENSPLAG00000022088	-	93	60.925	ENSORLG00015014797	-	99	60.925	Oryzias_latipes_hsok
ENSPLAG00000022088	-	94	97.017	ENSPFOG00000004204	-	100	97.017	Poecilia_formosa
ENSPLAG00000022088	-	100	99.255	ENSPMEG00000001411	-	100	99.255	Poecilia_mexicana
ENSPLAG00000022088	-	94	97.611	ENSPREG00000004161	-	100	97.611	Poecilia_reticulata
ENSPLAG00000022088	-	90	65.728	ENSPNYG00000020534	-	100	65.282	Pundamilia_nyererei
ENSPLAG00000022088	-	94	96.656	ENSXMAG00000011035	-	100	96.656	Xiphophorus_maculatus