EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000022320 (Gene tree)
Gene ID: 106947922
Gene Symbol: tsr1
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 10640 bases
Position: chrKQ545316.1:115513-126152
Accession: 106947922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000017797	AARP2CN	PF08142.12	1e-20	1	1
ENSPLAP00000017784	AARP2CN	PF08142.12	1.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000027109	-	2376	-	ENSPLAP00000017784	791 (aa)	-	-
ENSPLAT00000027125	-	2702	XM_015033289	ENSPLAP00000017797	839 (aa)	XP_014888775	UPI00072EE9BB

Gene Model

Click here to download ENSPLAG00000022320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000022320's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000022320	tsr1	99	54.779	ENSG00000167721	TSR1	99	54.534	Homo_sapiens
ENSPLAG00000022320	tsr1	99	85.203	ENSAPOG00000020891	tsr1	100	84.606	Acanthochromis_polyacanthus
ENSPLAG00000022320	tsr1	99	54.426	ENSAMEG00000007599	TSR1	99	53.163	Ailuropoda_melanoleuca
ENSPLAG00000022320	tsr1	100	81.740	ENSACIG00000007090	tsr1	100	81.250	Amphilophus_citrinellus
ENSPLAG00000022320	tsr1	99	84.330	ENSAOCG00000023284	tsr1	100	84.091	Amphiprion_ocellaris
ENSPLAG00000022320	tsr1	93	83.697	ENSAPEG00000008452	tsr1	100	83.569	Amphiprion_percula
ENSPLAG00000022320	tsr1	99	83.234	ENSATEG00000021961	tsr1	100	82.878	Anabas_testudineus
ENSPLAG00000022320	tsr1	90	57.748	ENSAPLG00000013422	TSR1	98	57.748	Anas_platyrhynchos
ENSPLAG00000022320	tsr1	71	50.413	ENSACAG00000000859	TSR1	92	48.350	Anolis_carolinensis
ENSPLAG00000022320	tsr1	99	54.982	ENSANAG00000031071	TSR1	99	54.680	Aotus_nancymaae
ENSPLAG00000022320	tsr1	100	84.625	ENSACLG00000007595	tsr1	100	82.956	Astatotilapia_calliptera
ENSPLAG00000022320	tsr1	53	72.792	ENSAMXG00000008470	tsr1	99	67.941	Astyanax_mexicanus
ENSPLAG00000022320	tsr1	99	55.706	ENSBTAG00000004225	TSR1	99	55.351	Bos_taurus
ENSPLAG00000022320	tsr1	97	40.994	WBGene00006497	tag-151	97	40.554	Caenorhabditis_elegans
ENSPLAG00000022320	tsr1	69	30.544	WBGene00022021	Y61A9LA.10	51	30.769	Caenorhabditis_elegans
ENSPLAG00000022320	tsr1	99	53.998	ENSCJAG00000012456	TSR1	99	53.695	Callithrix_jacchus
ENSPLAG00000022320	tsr1	89	52.925	ENSCAFG00000019273	-	100	55.572	Canis_familiaris
ENSPLAG00000022320	tsr1	99	54.982	ENSCAFG00000002106	-	99	54.244	Canis_familiaris
ENSPLAG00000022320	tsr1	99	54.982	ENSCAFG00020009728	TSR1	99	54.244	Canis_lupus_dingo
ENSPLAG00000022320	tsr1	99	56.303	ENSCHIG00000023935	TSR1	99	55.897	Capra_hircus
ENSPLAG00000022320	tsr1	99	55.474	ENSTSYG00000005468	TSR1	99	55.296	Carlito_syrichta
ENSPLAG00000022320	tsr1	92	54.907	ENSCPOG00000014833	TSR1	99	54.642	Cavia_porcellus
ENSPLAG00000022320	tsr1	92	54.040	ENSCCAG00000028962	TSR1	98	53.581	Cebus_capucinus
ENSPLAG00000022320	tsr1	97	54.963	ENSCATG00000044262	TSR1	98	54.467	Cercocebus_atys
ENSPLAG00000022320	tsr1	99	55.665	ENSCLAG00000005567	TSR1	99	55.542	Chinchilla_lanigera
ENSPLAG00000022320	tsr1	97	55.087	ENSCSAG00000013788	TSR1	98	54.591	Chlorocebus_sabaeus
ENSPLAG00000022320	tsr1	98	54.691	ENSCPBG00000020363	TSR1	98	53.673	Chrysemys_picta_bellii
ENSPLAG00000022320	tsr1	96	45.990	ENSCING00000020658	-	99	45.990	Ciona_intestinalis
ENSPLAG00000022320	tsr1	96	44.625	ENSCSAVG00000001875	-	100	45.374	Ciona_savignyi
ENSPLAG00000022320	tsr1	97	54.557	ENSCANG00000033056	TSR1	98	54.300	Colobus_angolensis_palliatus
ENSPLAG00000022320	tsr1	99	54.367	ENSCGRG00001023942	Tsr1	99	54.121	Cricetulus_griseus_chok1gshd
ENSPLAG00000022320	tsr1	99	54.071	ENSCGRG00000013015	Tsr1	99	53.553	Cricetulus_griseus_crigri
ENSPLAG00000022320	tsr1	99	76.675	ENSCSEG00000013009	tsr1	100	77.033	Cynoglossus_semilaevis
ENSPLAG00000022320	tsr1	99	88.158	ENSCVAG00000000506	tsr1	100	87.679	Cyprinodon_variegatus
ENSPLAG00000022320	tsr1	97	83.095	ENSDARG00000007744	tsr1	99	74.466	Danio_rerio
ENSPLAG00000022320	tsr1	99	56.281	ENSDNOG00000004715	TSR1	99	56.831	Dasypus_novemcinctus
ENSPLAG00000022320	tsr1	99	54.367	ENSDORG00000016371	-	99	53.875	Dipodomys_ordii
ENSPLAG00000022320	tsr1	96	49.545	ENSDORG00000023234	-	99	49.275	Dipodomys_ordii
ENSPLAG00000022320	tsr1	96	45.018	FBgn0037073	Tsr1	96	44.458	Drosophila_melanogaster
ENSPLAG00000022320	tsr1	91	67.869	ENSETEG00000017534	TSR1	88	67.213	Echinops_telfairi
ENSPLAG00000022320	tsr1	94	51.407	ENSEBUG00000013731	TSR1	97	50.639	Eptatretus_burgeri
ENSPLAG00000022320	tsr1	99	55.889	ENSEASG00005009302	TSR1	97	55.351	Equus_asinus_asinus
ENSPLAG00000022320	tsr1	99	55.836	ENSECAG00000009114	TSR1	99	55.296	Equus_caballus
ENSPLAG00000022320	tsr1	100	74.614	ENSELUG00000020984	tsr1	96	73.990	Esox_lucius
ENSPLAG00000022320	tsr1	99	54.994	ENSFCAG00000006313	TSR1	99	54.624	Felis_catus
ENSPLAG00000022320	tsr1	100	57.801	ENSFALG00000006532	TSR1	100	56.974	Ficedula_albicollis
ENSPLAG00000022320	tsr1	99	55.487	ENSFDAG00000006038	TSR1	99	54.691	Fukomys_damarensis
ENSPLAG00000022320	tsr1	100	89.061	ENSFHEG00000003626	tsr1	100	88.466	Fundulus_heteroclitus
ENSPLAG00000022320	tsr1	100	72.616	ENSGMOG00000010336	tsr1	100	72.127	Gadus_morhua
ENSPLAG00000022320	tsr1	100	96.663	ENSGAFG00000012993	tsr1	100	96.663	Gambusia_affinis
ENSPLAG00000022320	tsr1	100	79.197	ENSGACG00000010843	tsr1	100	79.572	Gasterosteus_aculeatus
ENSPLAG00000022320	tsr1	98	55.087	ENSGAGG00000025619	-	99	54.490	Gopherus_agassizii
ENSPLAG00000022320	tsr1	99	54.902	ENSGGOG00000001704	TSR1	99	54.534	Gorilla_gorilla
ENSPLAG00000022320	tsr1	100	84.744	ENSHBUG00000017904	tsr1	100	83.433	Haplochromis_burtoni
ENSPLAG00000022320	tsr1	99	55.283	ENSHGLG00000012806	-	99	54.736	Heterocephalus_glaber_female
ENSPLAG00000022320	tsr1	96	49.040	ENSHGLG00000015688	-	98	48.399	Heterocephalus_glaber_female
ENSPLAG00000022320	tsr1	99	55.283	ENSHGLG00100015392	TSR1	99	54.736	Heterocephalus_glaber_male
ENSPLAG00000022320	tsr1	100	79.302	ENSHCOG00000001432	tsr1	100	78.928	Hippocampus_comes
ENSPLAG00000022320	tsr1	99	73.484	ENSIPUG00000004618	tsr1	100	73.484	Ictalurus_punctatus
ENSPLAG00000022320	tsr1	99	55.889	ENSSTOG00000011819	TSR1	99	55.283	Ictidomys_tridecemlineatus
ENSPLAG00000022320	tsr1	90	54.094	ENSJJAG00000019505	Tsr1	95	53.495	Jaculus_jaculus
ENSPLAG00000022320	tsr1	100	83.313	ENSKMAG00000005763	tsr1	100	83.075	Kryptolebias_marmoratus
ENSPLAG00000022320	tsr1	100	82.837	ENSLBEG00000021823	tsr1	100	83.075	Labrus_bergylta
ENSPLAG00000022320	tsr1	99	57.160	ENSLACG00000002197	TSR1	100	56.023	Latimeria_chalumnae
ENSPLAG00000022320	tsr1	90	75.000	ENSLOCG00000006491	TSR1	99	75.000	Lepisosteus_oculatus
ENSPLAG00000022320	tsr1	97	55.211	ENSMFAG00000021330	TSR1	98	54.715	Macaca_fascicularis
ENSPLAG00000022320	tsr1	97	55.087	ENSMMUG00000017519	TSR1	98	54.591	Macaca_mulatta
ENSPLAG00000022320	tsr1	97	55.211	ENSMNEG00000031382	TSR1	98	54.715	Macaca_nemestrina
ENSPLAG00000022320	tsr1	97	54.963	ENSMLEG00000036733	TSR1	98	54.467	Mandrillus_leucophaeus
ENSPLAG00000022320	tsr1	100	82.485	ENSMAMG00000017918	tsr1	100	82.346	Mastacembelus_armatus
ENSPLAG00000022320	tsr1	99	83.751	ENSMZEG00005007477	tsr1	100	83.154	Maylandia_zebra
ENSPLAG00000022320	tsr1	99	57.314	ENSMGAG00000005576	TSR1	99	56.818	Meleagris_gallopavo
ENSPLAG00000022320	tsr1	99	55.966	ENSMICG00000012943	TSR1	99	55.665	Microcebus_murinus
ENSPLAG00000022320	tsr1	99	54.862	ENSMOCG00000022764	Tsr1	99	53.941	Microtus_ochrogaster
ENSPLAG00000022320	tsr1	99	82.416	ENSMMOG00000014280	tsr1	100	81.818	Mola_mola
ENSPLAG00000022320	tsr1	98	56.948	ENSMODG00000010658	TSR1	99	56.328	Monodelphis_domestica
ENSPLAG00000022320	tsr1	99	83.493	ENSMALG00000011681	tsr1	100	83.134	Monopterus_albus
ENSPLAG00000022320	tsr1	99	54.803	MGP_CAROLIEiJ_G0016727	Tsr1	99	54.310	Mus_caroli
ENSPLAG00000022320	tsr1	99	55.419	ENSMUSG00000038335	Tsr1	99	54.926	Mus_musculus
ENSPLAG00000022320	tsr1	99	55.788	MGP_PahariEiJ_G0017864	Tsr1	99	55.296	Mus_pahari
ENSPLAG00000022320	tsr1	99	55.542	MGP_SPRETEiJ_G0017570	Tsr1	99	55.049	Mus_spretus
ENSPLAG00000022320	tsr1	81	57.101	ENSMPUG00000013000	TSR1	100	56.410	Mustela_putorius_furo
ENSPLAG00000022320	tsr1	98	56.333	ENSMLUG00000003505	TSR1	99	55.802	Myotis_lucifugus
ENSPLAG00000022320	tsr1	100	84.863	ENSNBRG00000020728	tsr1	100	83.433	Neolamprologus_brichardi
ENSPLAG00000022320	tsr1	99	54.315	ENSNLEG00000017184	TSR1	97	65.330	Nomascus_leucogenys
ENSPLAG00000022320	tsr1	99	52.619	ENSMEUG00000015828	TSR1	99	52.073	Notamacropus_eugenii
ENSPLAG00000022320	tsr1	99	83.214	ENSONIG00000013131	tsr1	100	82.270	Oreochromis_niloticus
ENSPLAG00000022320	tsr1	95	56.110	ENSOANG00000008637	TSR1	100	54.805	Ornithorhynchus_anatinus
ENSPLAG00000022320	tsr1	98	56.024	ENSOCUG00000014256	TSR1	99	55.610	Oryctolagus_cuniculus
ENSPLAG00000022320	tsr1	100	81.883	ENSORLG00000004926	tsr1	100	81.764	Oryzias_latipes
ENSPLAG00000022320	tsr1	100	82.241	ENSORLG00020008792	tsr1	100	81.764	Oryzias_latipes_hni
ENSPLAG00000022320	tsr1	100	82.360	ENSORLG00015013838	tsr1	100	82.241	Oryzias_latipes_hsok
ENSPLAG00000022320	tsr1	100	83.194	ENSOMEG00000004830	tsr1	100	82.598	Oryzias_melastigma
ENSPLAG00000022320	tsr1	99	54.756	ENSOGAG00000004492	TSR1	99	54.756	Otolemur_garnettii
ENSPLAG00000022320	tsr1	99	56.303	ENSOARG00000015437	TSR1	97	55.897	Ovis_aries
ENSPLAG00000022320	tsr1	99	54.779	ENSPPAG00000036355	TSR1	99	54.534	Pan_paniscus
ENSPLAG00000022320	tsr1	99	54.871	ENSPPRG00000015519	-	99	54.624	Panthera_pardus
ENSPLAG00000022320	tsr1	99	54.871	ENSPTIG00000010608	TSR1	99	54.624	Panthera_tigris_altaica
ENSPLAG00000022320	tsr1	99	54.779	ENSPTRG00000008547	TSR1	99	54.534	Pan_troglodytes
ENSPLAG00000022320	tsr1	97	52.298	ENSPANG00000024463	TSR1	98	52.547	Papio_anubis
ENSPLAG00000022320	tsr1	100	71.658	ENSPKIG00000013972	tsr1	100	71.287	Paramormyrops_kingsleyae
ENSPLAG00000022320	tsr1	87	55.130	ENSPSIG00000018258	TSR1	99	54.533	Pelodiscus_sinensis
ENSPLAG00000022320	tsr1	99	78.563	ENSPMGG00000011577	tsr1	99	77.098	Periophthalmus_magnuspinnatus
ENSPLAG00000022320	tsr1	99	54.187	ENSPEMG00000018033	Tsr1	99	53.941	Peromyscus_maniculatus_bairdii
ENSPLAG00000022320	tsr1	99	56.258	ENSPCIG00000009357	TSR1	97	55.839	Phascolarctos_cinereus
ENSPLAG00000022320	tsr1	99	98.445	ENSPFOG00000004483	TSR1	100	98.445	Poecilia_formosa
ENSPLAG00000022320	tsr1	100	98.927	ENSPMEG00000004577	tsr1	100	98.927	Poecilia_mexicana
ENSPLAG00000022320	tsr1	97	97.433	ENSPREG00000010354	tsr1	99	96.976	Poecilia_reticulata
ENSPLAG00000022320	tsr1	99	50.183	ENSPPYG00000007792	TSR1	99	49.696	Pongo_abelii
ENSPLAG00000022320	tsr1	54	62.791	ENSPCAG00000012973	-	70	69.444	Procavia_capensis
ENSPLAG00000022320	tsr1	99	55.679	ENSPCOG00000017928	TSR1	99	55.185	Propithecus_coquereli
ENSPLAG00000022320	tsr1	99	55.351	ENSPVAG00000002162	TSR1	99	55.296	Pteropus_vampyrus
ENSPLAG00000022320	tsr1	100	84.863	ENSPNYG00000016163	tsr1	100	83.194	Pundamilia_nyererei
ENSPLAG00000022320	tsr1	99	73.690	ENSPNAG00000008659	tsr1	99	73.571	Pygocentrus_nattereri
ENSPLAG00000022320	tsr1	99	54.367	ENSRNOG00000002980	Tsr1	99	53.752	Rattus_norvegicus
ENSPLAG00000022320	tsr1	99	54.835	ENSRBIG00000040016	TSR1	99	54.957	Rhinopithecus_bieti
ENSPLAG00000022320	tsr1	99	54.712	ENSRROG00000030361	TSR1	99	54.835	Rhinopithecus_roxellana
ENSPLAG00000022320	tsr1	95	31.328	YDL060W	-	98	30.326	Saccharomyces_cerevisiae
ENSPLAG00000022320	tsr1	99	54.601	ENSSBOG00000020785	TSR1	99	54.356	Saimiri_boliviensis_boliviensis
ENSPLAG00000022320	tsr1	99	56.196	ENSSHAG00000011394	TSR1	99	56.319	Sarcophilus_harrisii
ENSPLAG00000022320	tsr1	100	71.065	ENSSFOG00015005455	tsr1	100	71.770	Scleropages_formosus
ENSPLAG00000022320	tsr1	99	81.579	ENSSMAG00000009504	tsr1	100	81.340	Scophthalmus_maximus
ENSPLAG00000022320	tsr1	100	83.829	ENSSDUG00000012074	tsr1	100	83.472	Seriola_dumerili
ENSPLAG00000022320	tsr1	100	83.929	ENSSLDG00000002031	tsr1	100	84.167	Seriola_lalandi_dorsalis
ENSPLAG00000022320	tsr1	92	57.200	ENSSARG00000000759	TSR1	93	57.200	Sorex_araneus
ENSPLAG00000022320	tsr1	99	56.355	ENSSPUG00000007042	TSR1	99	55.742	Sphenodon_punctatus
ENSPLAG00000022320	tsr1	99	84.845	ENSSPAG00000021951	tsr1	100	85.084	Stegastes_partitus
ENSPLAG00000022320	tsr1	99	55.651	ENSSSCG00000038534	TSR1	99	55.168	Sus_scrofa
ENSPLAG00000022320	tsr1	90	59.577	ENSTGUG00000005883	TSR1	100	58.681	Taeniopygia_guttata
ENSPLAG00000022320	tsr1	99	80.742	ENSTRUG00000004665	tsr1	100	80.024	Takifugu_rubripes
ENSPLAG00000022320	tsr1	99	82.090	ENSTNIG00000016196	tsr1	100	81.592	Tetraodon_nigroviridis
ENSPLAG00000022320	tsr1	66	70.000	ENSTBEG00000015275	-	66	70.000	Tupaia_belangeri
ENSPLAG00000022320	tsr1	99	56.595	ENSTTRG00000001177	TSR1	99	55.597	Tursiops_truncatus
ENSPLAG00000022320	tsr1	99	54.676	ENSUAMG00000025160	TSR1	99	54.074	Ursus_americanus
ENSPLAG00000022320	tsr1	95	53.665	ENSUMAG00000009294	TSR1	98	53.954	Ursus_maritimus
ENSPLAG00000022320	tsr1	82	52.266	ENSVPAG00000000228	TSR1	99	51.511	Vicugna_pacos
ENSPLAG00000022320	tsr1	99	54.982	ENSVVUG00000021767	TSR1	99	54.244	Vulpes_vulpes
ENSPLAG00000022320	tsr1	100	52.216	ENSXETG00000023797	tsr1	100	52.179	Xenopus_tropicalis
ENSPLAG00000022320	tsr1	99	93.301	ENSXCOG00000009635	tsr1	100	91.647	Xiphophorus_couchianus
ENSPLAG00000022320	tsr1	100	94.756	ENSXMAG00000001397	tsr1	97	93.325	Xiphophorus_maculatus