EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000022388 (Gene tree)
Gene ID: 106935350
Gene Symbol: clp1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3139 bases
Position: chrLMXD01026438.1:15076-18214
Accession: 106935350
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000017856	Clp1	PF06807.14	2.3e-30	1	1
ENSPLAP00000030885	Clp1	PF06807.14	2.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000027197	-	1308	-	ENSPLAP00000017856	435 (aa)	-	-
ENSPLAT00000031624	-	1671	XM_015015781	ENSPLAP00000030885	441 (aa)	XP_014871267	UPI000443DC0B

Gene Model

Click here to download ENSPLAG00000022388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000022388's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000022388	clp1	99	75.406	ENSG00000172409	CLP1	99	75.406	Homo_sapiens
ENSPLAG00000022388	clp1	100	94.558	ENSAPOG00000008242	clp1	100	94.558	Acanthochromis_polyacanthus
ENSPLAG00000022388	clp1	99	74.942	ENSAMEG00000014551	CLP1	99	74.713	Ailuropoda_melanoleuca
ENSPLAG00000022388	clp1	100	94.104	ENSACIG00000006310	clp1	99	94.104	Amphilophus_citrinellus
ENSPLAG00000022388	clp1	100	94.785	ENSAOCG00000010681	clp1	100	94.785	Amphiprion_ocellaris
ENSPLAG00000022388	clp1	100	94.785	ENSAPEG00000012165	clp1	100	94.785	Amphiprion_percula
ENSPLAG00000022388	clp1	100	94.558	ENSATEG00000012374	clp1	100	94.558	Anabas_testudineus
ENSPLAG00000022388	clp1	99	75.638	ENSACAG00000007139	CLP1	99	75.638	Anolis_carolinensis
ENSPLAG00000022388	clp1	99	75.406	ENSANAG00000034935	CLP1	99	75.406	Aotus_nancymaae
ENSPLAG00000022388	clp1	100	94.331	ENSACLG00000013573	clp1	100	94.331	Astatotilapia_calliptera
ENSPLAG00000022388	clp1	97	87.707	ENSAMXG00000014194	clp1	97	87.707	Astyanax_mexicanus
ENSPLAG00000022388	clp1	99	74.942	ENSBTAG00000006493	CLP1	99	74.942	Bos_taurus
ENSPLAG00000022388	clp1	96	47.059	WBGene00010304	clpf-1	97	47.059	Caenorhabditis_elegans
ENSPLAG00000022388	clp1	99	75.406	ENSCJAG00000008748	CLP1	99	75.406	Callithrix_jacchus
ENSPLAG00000022388	clp1	99	74.942	ENSCAFG00000007815	CLP1	99	74.942	Canis_familiaris
ENSPLAG00000022388	clp1	99	74.942	ENSCAFG00020000903	CLP1	99	74.942	Canis_lupus_dingo
ENSPLAG00000022388	clp1	99	75.638	ENSCHIG00000023497	CLP1	99	75.638	Capra_hircus
ENSPLAG00000022388	clp1	99	75.174	ENSTSYG00000006824	CLP1	99	74.943	Carlito_syrichta
ENSPLAG00000022388	clp1	99	74.537	ENSCAPG00000009703	CLP1	100	74.537	Cavia_aperea
ENSPLAG00000022388	clp1	97	75.943	ENSCPOG00000012554	CLP1	99	75.943	Cavia_porcellus
ENSPLAG00000022388	clp1	99	74.942	ENSCCAG00000031957	CLP1	99	74.942	Cebus_capucinus
ENSPLAG00000022388	clp1	99	75.406	ENSCATG00000044628	CLP1	99	75.406	Cercocebus_atys
ENSPLAG00000022388	clp1	99	75.174	ENSCLAG00000004094	CLP1	99	75.174	Chinchilla_lanigera
ENSPLAG00000022388	clp1	99	75.406	ENSCSAG00000005994	CLP1	99	75.406	Chlorocebus_sabaeus
ENSPLAG00000022388	clp1	99	75.174	ENSCPBG00000016843	CLP1	99	75.174	Chrysemys_picta_bellii
ENSPLAG00000022388	clp1	97	61.229	ENSCING00000003779	-	97	61.229	Ciona_intestinalis
ENSPLAG00000022388	clp1	98	60.557	ENSCSAVG00000003437	-	99	60.557	Ciona_savignyi
ENSPLAG00000022388	clp1	99	75.406	ENSCANG00000034335	CLP1	99	75.406	Colobus_angolensis_palliatus
ENSPLAG00000022388	clp1	99	74.478	ENSCGRG00001002227	CLP1	99	74.537	Cricetulus_griseus_chok1gshd
ENSPLAG00000022388	clp1	99	74.478	ENSCGRG00000004328	CLP1	99	74.537	Cricetulus_griseus_crigri
ENSPLAG00000022388	clp1	100	90.930	ENSCSEG00000008614	clp1	100	90.930	Cynoglossus_semilaevis
ENSPLAG00000022388	clp1	100	97.052	ENSCVAG00000020101	clp1	100	97.052	Cyprinodon_variegatus
ENSPLAG00000022388	clp1	97	88.124	ENSDARG00000063663	clp1	100	84.978	Danio_rerio
ENSPLAG00000022388	clp1	99	74.884	ENSDNOG00000042415	CLP1	90	74.596	Dasypus_novemcinctus
ENSPLAG00000022388	clp1	99	74.710	ENSDORG00000014685	Clp1	99	74.710	Dipodomys_ordii
ENSPLAG00000022388	clp1	96	53.810	FBgn0033842	cbc	98	53.810	Drosophila_melanogaster
ENSPLAG00000022388	clp1	99	75.174	ENSETEG00000003009	CLP1	99	75.174	Echinops_telfairi
ENSPLAG00000022388	clp1	99	64.434	ENSEBUG00000011648	clp1	100	64.434	Eptatretus_burgeri
ENSPLAG00000022388	clp1	99	75.638	ENSEASG00005002093	CLP1	99	75.638	Equus_asinus_asinus
ENSPLAG00000022388	clp1	99	75.638	ENSECAG00000011597	CLP1	99	75.638	Equus_caballus
ENSPLAG00000022388	clp1	99	74.478	ENSEEUG00000012771	CLP1	99	74.478	Erinaceus_europaeus
ENSPLAG00000022388	clp1	100	86.099	ENSELUG00000024048	clp1	100	86.099	Esox_lucius
ENSPLAG00000022388	clp1	99	75.174	ENSFCAG00000006633	CLP1	99	75.174	Felis_catus
ENSPLAG00000022388	clp1	99	75.638	ENSFALG00000011145	CLP1	99	75.638	Ficedula_albicollis
ENSPLAG00000022388	clp1	99	75.174	ENSFDAG00000000234	CLP1	99	75.174	Fukomys_damarensis
ENSPLAG00000022388	clp1	100	97.959	ENSFHEG00000014760	CLP1	100	97.959	Fundulus_heteroclitus
ENSPLAG00000022388	clp1	100	87.982	ENSGMOG00000019340	clp1	100	87.982	Gadus_morhua
ENSPLAG00000022388	clp1	99	75.870	ENSGALG00000007370	CLP1	99	75.870	Gallus_gallus
ENSPLAG00000022388	clp1	100	99.093	ENSGAFG00000003020	clp1	100	99.093	Gambusia_affinis
ENSPLAG00000022388	clp1	100	93.651	ENSGACG00000017832	clp1	100	93.651	Gasterosteus_aculeatus
ENSPLAG00000022388	clp1	99	75.174	ENSGAGG00000013279	CLP1	99	75.174	Gopherus_agassizii
ENSPLAG00000022388	clp1	99	75.406	ENSGGOG00000023006	CLP1	99	75.406	Gorilla_gorilla
ENSPLAG00000022388	clp1	100	94.558	ENSHBUG00000010436	clp1	100	94.558	Haplochromis_burtoni
ENSPLAG00000022388	clp1	99	75.174	ENSHGLG00000009914	CLP1	99	75.174	Heterocephalus_glaber_female
ENSPLAG00000022388	clp1	99	75.174	ENSHGLG00100006105	CLP1	99	75.174	Heterocephalus_glaber_male
ENSPLAG00000022388	clp1	100	93.651	ENSHCOG00000010072	clp1	100	93.651	Hippocampus_comes
ENSPLAG00000022388	clp1	97	87.943	ENSIPUG00000016238	clp1	99	84.410	Ictalurus_punctatus
ENSPLAG00000022388	clp1	99	75.174	ENSSTOG00000029257	CLP1	99	75.174	Ictidomys_tridecemlineatus
ENSPLAG00000022388	clp1	99	74.710	ENSJJAG00000023691	Clp1	99	74.710	Jaculus_jaculus
ENSPLAG00000022388	clp1	100	95.918	ENSKMAG00000011990	clp1	100	95.918	Kryptolebias_marmoratus
ENSPLAG00000022388	clp1	100	94.558	ENSLBEG00000010201	clp1	100	94.558	Labrus_bergylta
ENSPLAG00000022388	clp1	99	74.537	ENSLACG00000003160	CLP1	100	74.537	Latimeria_chalumnae
ENSPLAG00000022388	clp1	72	86.335	ENSLOCG00000008074	clp1	100	86.335	Lepisosteus_oculatus
ENSPLAG00000022388	clp1	99	74.942	ENSLAFG00000014907	CLP1	99	74.942	Loxodonta_africana
ENSPLAG00000022388	clp1	99	75.406	ENSMFAG00000046074	CLP1	99	75.406	Macaca_fascicularis
ENSPLAG00000022388	clp1	99	75.406	ENSMMUG00000038007	CLP1	99	74.943	Macaca_mulatta
ENSPLAG00000022388	clp1	99	75.406	ENSMNEG00000000259	CLP1	99	75.406	Macaca_nemestrina
ENSPLAG00000022388	clp1	99	75.406	ENSMLEG00000043556	CLP1	99	75.406	Mandrillus_leucophaeus
ENSPLAG00000022388	clp1	100	95.918	ENSMAMG00000002149	clp1	100	95.918	Mastacembelus_armatus
ENSPLAG00000022388	clp1	100	94.331	ENSMZEG00005002850	clp1	100	94.331	Maylandia_zebra
ENSPLAG00000022388	clp1	99	75.870	ENSMGAG00000009643	CLP1	99	75.870	Meleagris_gallopavo
ENSPLAG00000022388	clp1	99	74.246	ENSMAUG00000016261	Clp1	99	74.306	Mesocricetus_auratus
ENSPLAG00000022388	clp1	99	74.942	ENSMICG00000004895	CLP1	99	74.942	Microcebus_murinus
ENSPLAG00000022388	clp1	99	74.710	ENSMOCG00000005498	Clp1	99	74.769	Microtus_ochrogaster
ENSPLAG00000022388	clp1	100	93.197	ENSMMOG00000003229	clp1	100	93.197	Mola_mola
ENSPLAG00000022388	clp1	99	75.174	ENSMODG00000020107	-	99	75.174	Monodelphis_domestica
ENSPLAG00000022388	clp1	99	75.174	ENSMODG00000024148	-	99	75.174	Monodelphis_domestica
ENSPLAG00000022388	clp1	100	95.465	ENSMALG00000014239	clp1	100	95.465	Monopterus_albus
ENSPLAG00000022388	clp1	99	74.478	MGP_CAROLIEiJ_G0023726	Clp1	99	74.537	Mus_caroli
ENSPLAG00000022388	clp1	99	74.478	ENSMUSG00000027079	Clp1	99	74.537	Mus_musculus
ENSPLAG00000022388	clp1	99	74.246	MGP_PahariEiJ_G0025177	Clp1	99	74.306	Mus_pahari
ENSPLAG00000022388	clp1	99	74.478	MGP_SPRETEiJ_G0024646	Clp1	99	74.537	Mus_spretus
ENSPLAG00000022388	clp1	99	74.942	ENSMPUG00000000268	CLP1	99	74.942	Mustela_putorius_furo
ENSPLAG00000022388	clp1	99	75.174	ENSMLUG00000007904	CLP1	99	75.174	Myotis_lucifugus
ENSPLAG00000022388	clp1	99	74.710	ENSNGAG00000006165	Clp1	99	74.710	Nannospalax_galili
ENSPLAG00000022388	clp1	100	94.558	ENSNBRG00000005225	clp1	100	94.558	Neolamprologus_brichardi
ENSPLAG00000022388	clp1	81	69.141	ENSNLEG00000012809	-	99	69.141	Nomascus_leucogenys
ENSPLAG00000022388	clp1	99	74.942	ENSMEUG00000010949	CLP1	100	74.654	Notamacropus_eugenii
ENSPLAG00000022388	clp1	70	76.898	ENSOPRG00000007329	CLP1	100	76.898	Ochotona_princeps
ENSPLAG00000022388	clp1	99	75.174	ENSODEG00000011410	CLP1	99	75.174	Octodon_degus
ENSPLAG00000022388	clp1	100	94.785	ENSONIG00000005089	clp1	100	94.785	Oreochromis_niloticus
ENSPLAG00000022388	clp1	99	74.942	ENSOCUG00000007045	CLP1	99	74.942	Oryctolagus_cuniculus
ENSPLAG00000022388	clp1	100	94.104	ENSORLG00000003647	clp1	100	94.104	Oryzias_latipes
ENSPLAG00000022388	clp1	100	93.878	ENSORLG00020016676	clp1	100	93.878	Oryzias_latipes_hni
ENSPLAG00000022388	clp1	100	94.104	ENSORLG00015019484	clp1	100	94.104	Oryzias_latipes_hsok
ENSPLAG00000022388	clp1	100	94.104	ENSOMEG00000021303	clp1	100	94.104	Oryzias_melastigma
ENSPLAG00000022388	clp1	99	75.174	ENSOGAG00000004508	CLP1	99	75.174	Otolemur_garnettii
ENSPLAG00000022388	clp1	99	74.478	ENSOARG00000010145	CLP1	99	74.194	Ovis_aries
ENSPLAG00000022388	clp1	99	75.406	ENSPPAG00000041519	CLP1	99	75.406	Pan_paniscus
ENSPLAG00000022388	clp1	99	75.174	ENSPPRG00000006135	CLP1	99	75.174	Panthera_pardus
ENSPLAG00000022388	clp1	99	75.174	ENSPTIG00000015866	CLP1	99	75.174	Panthera_tigris_altaica
ENSPLAG00000022388	clp1	99	75.406	ENSPTRG00000047318	CLP1	99	75.406	Pan_troglodytes
ENSPLAG00000022388	clp1	99	75.406	ENSPANG00000017078	CLP1	98	74.943	Papio_anubis
ENSPLAG00000022388	clp1	97	88.571	ENSPKIG00000007697	clp1	100	85.618	Paramormyrops_kingsleyae
ENSPLAG00000022388	clp1	94	72.549	ENSPSIG00000005468	CLP1	99	72.549	Pelodiscus_sinensis
ENSPLAG00000022388	clp1	100	92.290	ENSPMGG00000012171	clp1	100	92.290	Periophthalmus_magnuspinnatus
ENSPLAG00000022388	clp1	99	74.710	ENSPEMG00000011213	-	99	74.769	Peromyscus_maniculatus_bairdii
ENSPLAG00000022388	clp1	97	67.773	ENSPMAG00000006707	clp1	98	67.773	Petromyzon_marinus
ENSPLAG00000022388	clp1	99	75.638	ENSPCIG00000011899	CLP1	99	75.638	Phascolarctos_cinereus
ENSPLAG00000022388	clp1	100	100.000	ENSPFOG00000008169	clp1	100	100.000	Poecilia_formosa
ENSPLAG00000022388	clp1	100	100.000	ENSPMEG00000021088	clp1	100	100.000	Poecilia_mexicana
ENSPLAG00000022388	clp1	100	99.093	ENSPREG00000017802	clp1	100	99.093	Poecilia_reticulata
ENSPLAG00000022388	clp1	53	73.799	ENSPPYG00000003266	-	100	73.799	Pongo_abelii
ENSPLAG00000022388	clp1	99	74.942	ENSPCOG00000000360	CLP1	99	74.713	Propithecus_coquereli
ENSPLAG00000022388	clp1	99	74.942	ENSPVAG00000016270	CLP1	99	74.942	Pteropus_vampyrus
ENSPLAG00000022388	clp1	100	94.558	ENSPNYG00000017274	clp1	99	94.558	Pundamilia_nyererei
ENSPLAG00000022388	clp1	97	88.652	ENSPNAG00000026460	clp1	100	85.268	Pygocentrus_nattereri
ENSPLAG00000022388	clp1	99	74.478	ENSRNOG00000007416	Clp1	99	74.537	Rattus_norvegicus
ENSPLAG00000022388	clp1	99	75.406	ENSRBIG00000018191	CLP1	99	75.406	Rhinopithecus_bieti
ENSPLAG00000022388	clp1	99	75.406	ENSRROG00000039265	CLP1	99	75.406	Rhinopithecus_roxellana
ENSPLAG00000022388	clp1	95	62.802	ENSSBOG00000010558	-	93	62.802	Saimiri_boliviensis_boliviensis
ENSPLAG00000022388	clp1	99	75.406	ENSSBOG00000032517	-	99	75.406	Saimiri_boliviensis_boliviensis
ENSPLAG00000022388	clp1	99	75.174	ENSSHAG00000015695	CLP1	99	75.174	Sarcophilus_harrisii
ENSPLAG00000022388	clp1	100	83.444	ENSSFOG00015000628	clp1	100	83.444	Scleropages_formosus
ENSPLAG00000022388	clp1	100	94.558	ENSSMAG00000019423	clp1	99	94.558	Scophthalmus_maximus
ENSPLAG00000022388	clp1	100	94.785	ENSSDUG00000014495	clp1	100	94.785	Seriola_dumerili
ENSPLAG00000022388	clp1	100	94.558	ENSSLDG00000000937	clp1	100	94.558	Seriola_lalandi_dorsalis
ENSPLAG00000022388	clp1	52	73.684	ENSSARG00000002459	CLP1	100	73.684	Sorex_araneus
ENSPLAG00000022388	clp1	99	74.942	ENSSPUG00000016811	CLP1	99	74.942	Sphenodon_punctatus
ENSPLAG00000022388	clp1	100	94.558	ENSSPAG00000016052	clp1	100	94.558	Stegastes_partitus
ENSPLAG00000022388	clp1	99	74.942	ENSSSCG00000031442	CLP1	99	74.942	Sus_scrofa
ENSPLAG00000022388	clp1	99	75.406	ENSTGUG00000007002	CLP1	99	75.406	Taeniopygia_guttata
ENSPLAG00000022388	clp1	100	90.476	ENSTRUG00000012602	clp1	100	90.476	Takifugu_rubripes
ENSPLAG00000022388	clp1	100	90.476	ENSTNIG00000013125	clp1	100	90.476	Tetraodon_nigroviridis
ENSPLAG00000022388	clp1	99	74.710	ENSTBEG00000009975	CLP1	99	74.710	Tupaia_belangeri
ENSPLAG00000022388	clp1	99	74.942	ENSTTRG00000002096	CLP1	99	74.942	Tursiops_truncatus
ENSPLAG00000022388	clp1	99	74.942	ENSUAMG00000011388	CLP1	99	74.942	Ursus_americanus
ENSPLAG00000022388	clp1	99	74.942	ENSUMAG00000018317	CLP1	99	74.942	Ursus_maritimus
ENSPLAG00000022388	clp1	99	74.942	ENSVVUG00000017138	CLP1	99	73.923	Vulpes_vulpes
ENSPLAG00000022388	clp1	99	72.558	ENSXETG00000007088	clp1	97	72.791	Xenopus_tropicalis
ENSPLAG00000022388	clp1	100	99.320	ENSXCOG00000002287	clp1	100	99.320	Xiphophorus_couchianus
ENSPLAG00000022388	clp1	100	99.320	ENSXMAG00000009783	clp1	100	99.320	Xiphophorus_maculatus