EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000022539 (Gene tree)
Gene ID: 106944707
Gene Symbol: sall1a
Alias: -
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 55310 bases
Position: chrKQ545424.1:250940-306249
Accession: 106944707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000017992	zf-C2H2	PF00096.26	4.7e-35	1	7
ENSPLAP00000017992	zf-C2H2	PF00096.26	4.7e-35	2	7
ENSPLAP00000017992	zf-C2H2	PF00096.26	4.7e-35	3	7
ENSPLAP00000017992	zf-C2H2	PF00096.26	4.7e-35	4	7
ENSPLAP00000017992	zf-C2H2	PF00096.26	4.7e-35	5	7
ENSPLAP00000017992	zf-C2H2	PF00096.26	4.7e-35	6	7
ENSPLAP00000017992	zf-C2H2	PF00096.26	4.7e-35	7	7
ENSPLAP00000030973	zf-C2H2	PF00096.26	5.8e-35	1	7
ENSPLAP00000030973	zf-C2H2	PF00096.26	5.8e-35	2	7
ENSPLAP00000030973	zf-C2H2	PF00096.26	5.8e-35	3	7
ENSPLAP00000030973	zf-C2H2	PF00096.26	5.8e-35	4	7
ENSPLAP00000030973	zf-C2H2	PF00096.26	5.8e-35	5	7
ENSPLAP00000030973	zf-C2H2	PF00096.26	5.8e-35	6	7
ENSPLAP00000030973	zf-C2H2	PF00096.26	5.8e-35	7	7
ENSPLAP00000017992	zf-met	PF12874.7	9.6e-24	1	5
ENSPLAP00000017992	zf-met	PF12874.7	9.6e-24	2	5
ENSPLAP00000017992	zf-met	PF12874.7	9.6e-24	3	5
ENSPLAP00000017992	zf-met	PF12874.7	9.6e-24	4	5
ENSPLAP00000017992	zf-met	PF12874.7	9.6e-24	5	5
ENSPLAP00000030973	zf-met	PF12874.7	1.3e-23	1	5
ENSPLAP00000030973	zf-met	PF12874.7	1.3e-23	2	5
ENSPLAP00000030973	zf-met	PF12874.7	1.3e-23	3	5
ENSPLAP00000030973	zf-met	PF12874.7	1.3e-23	4	5
ENSPLAP00000030973	zf-met	PF12874.7	1.3e-23	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000031680	-	5974	XM_015027913	ENSPLAP00000017992	1309 (aa)	XP_014883399	UPI00072E6D18
ENSPLAT00000027385	-	5320	XM_015027912	ENSPLAP00000030973	1340 (aa)	XP_014883398	UPI00072EDA7E

Gene Model

Click here to download ENSPLAG00000022539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000022539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000022539	sall1a	86	63.462	ENSPLAG00000013919	sall3b	100	63.462
ENSPLAG00000022539	sall1a	58	53.191	ENSPLAG00000021634	-	93	50.980
ENSPLAG00000022539	sall1a	79	65.385	ENSPLAG00000008760	sall4	75	65.385
ENSPLAG00000022539	sall1a	55	36.782	ENSPLAG00000002838	-	86	46.939
ENSPLAG00000022539	sall1a	57	49.020	ENSPLAG00000009346	znf236	71	49.020
ENSPLAG00000022539	sall1a	79	63.415	ENSPLAG00000018123	sall3a	97	63.265
ENSPLAG00000022539	sall1a	57	45.614	ENSPLAG00000021050	-	87	45.614
ENSPLAG00000022539	sall1a	57	45.614	ENSPLAG00000011798	-	87	45.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000022539	sall1a	99	67.511	ENSG00000103449	SALL1	100	67.463	Homo_sapiens
ENSPLAG00000022539	sall1a	100	92.972	ENSAPOG00000022764	sall1a	100	92.972	Acanthochromis_polyacanthus
ENSPLAG00000022539	sall1a	99	66.642	ENSAMEG00000006817	SALL1	100	66.791	Ailuropoda_melanoleuca
ENSPLAG00000022539	sall1a	100	91.520	ENSACIG00000004231	sall1a	100	91.520	Amphilophus_citrinellus
ENSPLAG00000022539	sall1a	100	93.430	ENSAOCG00000002800	sall1a	100	93.430	Amphiprion_ocellaris
ENSPLAG00000022539	sall1a	100	93.201	ENSAPEG00000010179	sall1a	100	93.201	Amphiprion_percula
ENSPLAG00000022539	sall1a	99	91.361	ENSATEG00000003006	sall1a	99	91.361	Anabas_testudineus
ENSPLAG00000022539	sall1a	100	69.225	ENSAPLG00000003356	SALL1	100	69.403	Anas_platyrhynchos
ENSPLAG00000022539	sall1a	99	67.396	ENSACAG00000014399	SALL1	97	67.372	Anolis_carolinensis
ENSPLAG00000022539	sall1a	99	67.687	ENSANAG00000027238	SALL1	100	67.807	Aotus_nancymaae
ENSPLAG00000022539	sall1a	100	91.902	ENSACLG00000017148	sall1a	100	91.902	Astatotilapia_calliptera
ENSPLAG00000022539	sall1a	100	79.711	ENSAMXG00000018599	sall1a	100	80.167	Astyanax_mexicanus
ENSPLAG00000022539	sall1a	99	52.561	ENSAMXG00000017702	sall1b	99	52.833	Astyanax_mexicanus
ENSPLAG00000022539	sall1a	100	67.040	ENSBTAG00000008544	SALL1	100	67.265	Bos_taurus
ENSPLAG00000022539	sall1a	99	67.934	ENSCJAG00000001740	SALL1	100	68.084	Callithrix_jacchus
ENSPLAG00000022539	sall1a	99	66.841	ENSCAFG00000009755	SALL1	100	67.313	Canis_familiaris
ENSPLAG00000022539	sall1a	99	66.841	ENSCAFG00020002842	SALL1	100	67.313	Canis_lupus_dingo
ENSPLAG00000022539	sall1a	100	67.065	ENSCHIG00000026074	SALL1	100	67.216	Capra_hircus
ENSPLAG00000022539	sall1a	99	68.280	ENSTSYG00000029464	SALL1	100	68.158	Carlito_syrichta
ENSPLAG00000022539	sall1a	98	68.061	ENSCPOG00000006564	SALL1	99	67.912	Cavia_porcellus
ENSPLAG00000022539	sall1a	99	66.045	ENSCCAG00000001639	SALL1	100	66.045	Cebus_capucinus
ENSPLAG00000022539	sall1a	99	67.836	ENSCATG00000004982	SALL1	100	67.961	Cercocebus_atys
ENSPLAG00000022539	sall1a	99	67.537	ENSCLAG00000006380	SALL1	100	67.737	Chinchilla_lanigera
ENSPLAG00000022539	sall1a	99	67.015	ENSCSAG00000005319	SALL1	100	67.138	Chlorocebus_sabaeus
ENSPLAG00000022539	sall1a	66	65.891	ENSCHOG00000000800	-	69	65.600	Choloepus_hoffmanni
ENSPLAG00000022539	sall1a	100	68.955	ENSCPBG00000015924	SALL1	100	69.328	Chrysemys_picta_bellii
ENSPLAG00000022539	sall1a	99	68.063	ENSCANG00000036664	SALL1	100	68.090	Colobus_angolensis_palliatus
ENSPLAG00000022539	sall1a	99	66.542	ENSCGRG00001023314	-	100	66.716	Cricetulus_griseus_chok1gshd
ENSPLAG00000022539	sall1a	98	66.489	ENSCGRG00000009496	Sall1	100	66.667	Cricetulus_griseus_crigri
ENSPLAG00000022539	sall1a	99	89.024	ENSCSEG00000009349	sall1a	99	89.024	Cynoglossus_semilaevis
ENSPLAG00000022539	sall1a	90	94.927	ENSCVAG00000020513	sall1a	99	94.927	Cyprinodon_variegatus
ENSPLAG00000022539	sall1a	99	47.931	ENSDARG00000075891	sall1b	99	47.270	Danio_rerio
ENSPLAG00000022539	sall1a	100	79.545	ENSDARG00000074319	sall1a	100	79.167	Danio_rerio
ENSPLAG00000022539	sall1a	99	68.185	ENSDNOG00000016413	SALL1	100	68.138	Dasypus_novemcinctus
ENSPLAG00000022539	sall1a	98	67.530	ENSETEG00000015150	SALL1	99	67.609	Echinops_telfairi
ENSPLAG00000022539	sall1a	62	42.267	ENSEBUG00000008798	SALL1	94	36.147	Eptatretus_burgeri
ENSPLAG00000022539	sall1a	59	65.385	ENSEBUG00000011732	SALL1	97	65.385	Eptatretus_burgeri
ENSPLAG00000022539	sall1a	99	67.265	ENSEASG00005014602	SALL1	100	67.614	Equus_asinus_asinus
ENSPLAG00000022539	sall1a	90	65.432	ENSECAG00000011334	SALL1	99	65.731	Equus_caballus
ENSPLAG00000022539	sall1a	98	67.784	ENSEEUG00000002014	SALL1	100	67.582	Erinaceus_europaeus
ENSPLAG00000022539	sall1a	100	53.778	ENSELUG00000017774	-	100	54.464	Esox_lucius
ENSPLAG00000022539	sall1a	100	77.618	ENSELUG00000006159	sall1a	100	77.690	Esox_lucius
ENSPLAG00000022539	sall1a	99	65.994	ENSFCAG00000024654	SALL1	100	66.667	Felis_catus
ENSPLAG00000022539	sall1a	100	69.478	ENSFALG00000000074	SALL1	100	69.455	Ficedula_albicollis
ENSPLAG00000022539	sall1a	100	96.257	ENSFHEG00000012579	sall1a	100	96.257	Fundulus_heteroclitus
ENSPLAG00000022539	sall1a	74	63.415	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSPLAG00000022539	sall1a	100	83.562	ENSGMOG00000006103	sall1a	100	83.562	Gadus_morhua
ENSPLAG00000022539	sall1a	97	40.782	ENSGMOG00000013383	-	99	40.474	Gadus_morhua
ENSPLAG00000022539	sall1a	100	69.500	ENSGALG00000039238	SALL1	100	69.380	Gallus_gallus
ENSPLAG00000022539	sall1a	100	98.701	ENSGAFG00000009964	sall1a	100	98.701	Gambusia_affinis
ENSPLAG00000022539	sall1a	99	89.373	ENSGACG00000016702	sall1a	99	89.373	Gasterosteus_aculeatus
ENSPLAG00000022539	sall1a	100	69.190	ENSGAGG00000013979	SALL1	100	69.542	Gopherus_agassizii
ENSPLAG00000022539	sall1a	99	67.737	ENSGGOG00000000663	SALL1	100	67.764	Gorilla_gorilla
ENSPLAG00000022539	sall1a	100	91.826	ENSHBUG00000022005	sall1a	100	91.826	Haplochromis_burtoni
ENSPLAG00000022539	sall1a	99	68.358	ENSHGLG00000004288	-	100	68.409	Heterocephalus_glaber_female
ENSPLAG00000022539	sall1a	99	68.358	ENSHGLG00100017496	SALL1	100	68.409	Heterocephalus_glaber_male
ENSPLAG00000022539	sall1a	100	84.743	ENSHCOG00000000974	sall1a	100	84.668	Hippocampus_comes
ENSPLAG00000022539	sall1a	100	79.407	ENSIPUG00000016265	SALL1	100	78.707	Ictalurus_punctatus
ENSPLAG00000022539	sall1a	99	51.091	ENSIPUG00000022928	sall1b	99	50.865	Ictalurus_punctatus
ENSPLAG00000022539	sall1a	99	68.101	ENSSTOG00000020885	SALL1	100	68.053	Ictidomys_tridecemlineatus
ENSPLAG00000022539	sall1a	100	92.819	ENSKMAG00000016681	sall1a	100	92.819	Kryptolebias_marmoratus
ENSPLAG00000022539	sall1a	98	88.819	ENSLBEG00000012207	sall1a	95	88.819	Labrus_bergylta
ENSPLAG00000022539	sall1a	100	68.161	ENSLACG00000003556	SALL1	100	68.460	Latimeria_chalumnae
ENSPLAG00000022539	sall1a	97	37.756	ENSLACG00000014018	-	93	38.406	Latimeria_chalumnae
ENSPLAG00000022539	sall1a	100	77.887	ENSLOCG00000007283	sall1b	100	77.811	Lepisosteus_oculatus
ENSPLAG00000022539	sall1a	98	67.609	ENSLAFG00000015251	SALL1	100	67.806	Loxodonta_africana
ENSPLAG00000022539	sall1a	99	67.860	ENSMFAG00000003298	SALL1	100	67.812	Macaca_fascicularis
ENSPLAG00000022539	sall1a	93	67.685	ENSMMUG00000017200	SALL1	100	67.633	Macaca_mulatta
ENSPLAG00000022539	sall1a	93	67.711	ENSMNEG00000034770	SALL1	100	67.578	Macaca_nemestrina
ENSPLAG00000022539	sall1a	99	67.985	ENSMLEG00000036406	SALL1	100	67.937	Mandrillus_leucophaeus
ENSPLAG00000022539	sall1a	99	92.208	ENSMAMG00000004164	sall1a	99	92.208	Mastacembelus_armatus
ENSPLAG00000022539	sall1a	100	91.902	ENSMZEG00005006479	sall1a	100	91.902	Maylandia_zebra
ENSPLAG00000022539	sall1a	98	69.301	ENSMGAG00000004704	SALL1	100	69.178	Meleagris_gallopavo
ENSPLAG00000022539	sall1a	100	65.674	ENSMAUG00000019093	Sall1	100	65.896	Mesocricetus_auratus
ENSPLAG00000022539	sall1a	100	66.966	ENSMICG00000036486	SALL1	100	67.190	Microcebus_murinus
ENSPLAG00000022539	sall1a	99	90.673	ENSMMOG00000016400	sall1a	99	90.673	Mola_mola
ENSPLAG00000022539	sall1a	99	68.464	ENSMODG00000013114	SALL1	99	68.844	Monodelphis_domestica
ENSPLAG00000022539	sall1a	99	91.437	ENSMALG00000013400	sall1a	99	91.437	Monopterus_albus
ENSPLAG00000022539	sall1a	100	66.691	MGP_CAROLIEiJ_G0031362	Sall1	100	66.741	Mus_caroli
ENSPLAG00000022539	sall1a	99	66.469	ENSMUSG00000031665	Sall1	100	66.642	Mus_musculus
ENSPLAG00000022539	sall1a	99	66.889	MGP_PahariEiJ_G0022961	Sall1	100	66.691	Mus_pahari
ENSPLAG00000022539	sall1a	99	66.395	MGP_SPRETEiJ_G0032480	Sall1	100	66.568	Mus_spretus
ENSPLAG00000022539	sall1a	98	66.185	ENSMPUG00000003265	SALL1	96	66.514	Mustela_putorius_furo
ENSPLAG00000022539	sall1a	97	65.061	ENSMLUG00000015541	SALL1	99	66.005	Myotis_lucifugus
ENSPLAG00000022539	sall1a	100	92.055	ENSNBRG00000009307	sall1a	100	92.055	Neolamprologus_brichardi
ENSPLAG00000022539	sall1a	93	80.110	ENSNLEG00000001008	SALL1	99	79.670	Nomascus_leucogenys
ENSPLAG00000022539	sall1a	99	68.331	ENSMEUG00000012206	SALL1	99	68.614	Notamacropus_eugenii
ENSPLAG00000022539	sall1a	86	72.727	ENSOPRG00000005645	SALL1	71	72.247	Ochotona_princeps
ENSPLAG00000022539	sall1a	99	67.487	ENSODEG00000003685	SALL1	100	67.737	Octodon_degus
ENSPLAG00000022539	sall1a	100	92.437	ENSONIG00000002831	sall1a	100	92.437	Oreochromis_niloticus
ENSPLAG00000022539	sall1a	99	63.455	ENSOANG00000013399	SALL1	96	79.098	Ornithorhynchus_anatinus
ENSPLAG00000022539	sall1a	100	90.680	ENSORLG00000013827	sall1a	100	91.315	Oryzias_latipes
ENSPLAG00000022539	sall1a	100	90.680	ENSORLG00020020570	sall1a	100	90.680	Oryzias_latipes_hni
ENSPLAG00000022539	sall1a	100	90.680	ENSORLG00015018830	sall1a	100	91.400	Oryzias_latipes_hsok
ENSPLAG00000022539	sall1a	100	90.451	ENSOMEG00000016043	sall1a	100	90.684	Oryzias_melastigma
ENSPLAG00000022539	sall1a	100	67.687	ENSOGAG00000027316	SALL1	100	67.713	Otolemur_garnettii
ENSPLAG00000022539	sall1a	100	63.460	ENSOARG00000017583	SALL1	100	63.229	Ovis_aries
ENSPLAG00000022539	sall1a	99	50.300	ENSPPAG00000035136	-	98	51.308	Pan_paniscus
ENSPLAG00000022539	sall1a	98	67.781	ENSPPAG00000035657	SALL1	100	67.732	Pan_paniscus
ENSPLAG00000022539	sall1a	100	65.870	ENSPPRG00000023283	SALL1	100	66.586	Panthera_pardus
ENSPLAG00000022539	sall1a	80	71.241	ENSPTIG00000013539	-	94	71.078	Panthera_tigris_altaica
ENSPLAG00000022539	sall1a	99	67.537	ENSPTRG00000008108	SALL1	100	67.761	Pan_troglodytes
ENSPLAG00000022539	sall1a	99	50.494	ENSPTRG00000045256	-	99	50.648	Pan_troglodytes
ENSPLAG00000022539	sall1a	99	67.910	ENSPANG00000024176	SALL1	100	67.862	Papio_anubis
ENSPLAG00000022539	sall1a	100	72.411	ENSPKIG00000022251	sall1a	100	72.411	Paramormyrops_kingsleyae
ENSPLAG00000022539	sall1a	100	70.424	ENSPKIG00000005383	-	100	70.899	Paramormyrops_kingsleyae
ENSPLAG00000022539	sall1a	100	69.328	ENSPSIG00000008582	SALL1	100	69.455	Pelodiscus_sinensis
ENSPLAG00000022539	sall1a	99	84.389	ENSPMGG00000021788	sall1a	99	84.389	Periophthalmus_magnuspinnatus
ENSPLAG00000022539	sall1a	97	47.842	ENSPMAG00000008148	sall1b	97	48.478	Petromyzon_marinus
ENSPLAG00000022539	sall1a	99	68.614	ENSPCIG00000017840	SALL1	99	68.689	Phascolarctos_cinereus
ENSPLAG00000022539	sall1a	100	99.776	ENSPFOG00000015799	sall1a	100	99.776	Poecilia_formosa
ENSPLAG00000022539	sall1a	100	99.552	ENSPMEG00000020894	sall1a	100	99.552	Poecilia_mexicana
ENSPLAG00000022539	sall1a	100	98.701	ENSPREG00000006802	sall1a	100	98.701	Poecilia_reticulata
ENSPLAG00000022539	sall1a	90	66.499	ENSPPYG00000007345	SALL1	96	66.778	Pongo_abelii
ENSPLAG00000022539	sall1a	84	70.370	ENSPCAG00000008162	SALL1	93	70.370	Procavia_capensis
ENSPLAG00000022539	sall1a	100	67.090	ENSPCOG00000028192	SALL1	100	67.338	Propithecus_coquereli
ENSPLAG00000022539	sall1a	66	69.355	ENSPVAG00000015374	SALL1	100	69.249	Pteropus_vampyrus
ENSPLAG00000022539	sall1a	100	91.979	ENSPNYG00000010865	sall1a	100	91.979	Pundamilia_nyererei
ENSPLAG00000022539	sall1a	71	65.306	ENSPNAG00000028248	-	71	65.306	Pygocentrus_nattereri
ENSPLAG00000022539	sall1a	99	53.679	ENSPNAG00000007442	sall1b	99	53.748	Pygocentrus_nattereri
ENSPLAG00000022539	sall1a	100	78.284	ENSPNAG00000023644	sall1a	100	78.740	Pygocentrus_nattereri
ENSPLAG00000022539	sall1a	100	66.991	ENSRNOG00000013907	Sall1	100	67.016	Rattus_norvegicus
ENSPLAG00000022539	sall1a	93	67.578	ENSRBIG00000015707	SALL1	100	67.871	Rhinopithecus_bieti
ENSPLAG00000022539	sall1a	97	67.893	ENSRROG00000035777	SALL1	100	67.871	Rhinopithecus_roxellana
ENSPLAG00000022539	sall1a	99	67.785	ENSSBOG00000032186	SALL1	100	67.732	Saimiri_boliviensis_boliviensis
ENSPLAG00000022539	sall1a	99	68.240	ENSSHAG00000009477	SALL1	99	68.318	Sarcophilus_harrisii
ENSPLAG00000022539	sall1a	100	72.816	ENSSFOG00015020020	sall1a	100	72.741	Scleropages_formosus
ENSPLAG00000022539	sall1a	98	71.308	ENSSFOG00015001590	sall1a	99	71.901	Scleropages_formosus
ENSPLAG00000022539	sall1a	99	91.437	ENSSMAG00000009160	sall1a	99	91.437	Scophthalmus_maximus
ENSPLAG00000022539	sall1a	99	93.119	ENSSDUG00000006507	sall1a	99	93.119	Seriola_dumerili
ENSPLAG00000022539	sall1a	76	59.184	ENSSDUG00000000748	sall1b	99	59.184	Seriola_dumerili
ENSPLAG00000022539	sall1a	99	93.119	ENSSLDG00000017721	sall1a	99	93.119	Seriola_lalandi_dorsalis
ENSPLAG00000022539	sall1a	97	67.149	ENSSARG00000000661	SALL1	99	67.252	Sorex_araneus
ENSPLAG00000022539	sall1a	100	68.717	ENSSPUG00000000156	SALL1	100	68.755	Sphenodon_punctatus
ENSPLAG00000022539	sall1a	100	93.359	ENSSPAG00000021615	sall1a	100	93.359	Stegastes_partitus
ENSPLAG00000022539	sall1a	99	66.890	ENSSSCG00000002836	SALL1	100	66.841	Sus_scrofa
ENSPLAG00000022539	sall1a	100	69.254	ENSTGUG00000007514	SALL1	100	69.081	Taeniopygia_guttata
ENSPLAG00000022539	sall1a	91	86.778	ENSTRUG00000008950	sall1a	100	86.778	Takifugu_rubripes
ENSPLAG00000022539	sall1a	92	85.333	ENSTNIG00000004257	sall1a	100	85.333	Tetraodon_nigroviridis
ENSPLAG00000022539	sall1a	72	75.676	ENSTBEG00000002119	-	53	75.676	Tupaia_belangeri
ENSPLAG00000022539	sall1a	90	65.633	ENSUAMG00000023379	-	92	65.941	Ursus_americanus
ENSPLAG00000022539	sall1a	90	65.803	ENSVVUG00000019383	-	99	65.970	Vulpes_vulpes
ENSPLAG00000022539	sall1a	97	33.988	ENSXETG00000017176	sall2	94	37.686	Xenopus_tropicalis
ENSPLAG00000022539	sall1a	100	65.265	ENSXETG00000018417	sall1	100	65.598	Xenopus_tropicalis
ENSPLAG00000022539	sall1a	100	98.930	ENSXMAG00000016273	sall1a	100	98.930	Xiphophorus_maculatus