EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPLAG00000022696 (Gene tree)
Gene ID
106963433
Gene Symbol
pabpn1
Alias
-
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Plus strand
Length
13655 bases
Position
chrKQ546847.1:149194-162848
Accession
106963433
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000018122RRM_1PF00076.223.4e-1711
ENSPLAP00000018130RRM_1PF00076.223.6e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000027538-1947XM_015058334ENSPLAP00000018122286 (aa)XP_014913820UPI00072E26C0
ENSPLAT00000027556-1971XM_015058335ENSPLAP00000018130294 (aa)XP_014913821-
Gene Model
Click here to download ENSPLAG00000022696's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000022696's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPLAG00000022696pabpn15161.438ENSPLAG00000018431PABPN1L7554.245
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000022696pabpn16880.882ENSG00000100836PABPN19280.892Homo_sapiens
ENSPLAG00000022696pabpn17870.996ENSG00000258643BCL2L2-PABPN16671.171Homo_sapiens
ENSPLAG00000022696pabpn110097.203ENSAPOG00000016425pabpn110097.203Acanthochromis_polyacanthus
ENSPLAG00000022696pabpn16382.447ENSAMEG00000007048BCL2L2-PABPN19483.240Ailuropoda_melanoleuca
ENSPLAG00000022696pabpn110095.833ENSACIG00000021744pabpn110095.833Amphilophus_citrinellus
ENSPLAG00000022696pabpn17996.537ENSAOCG00000015805pabpn19996.537Amphiprion_ocellaris
ENSPLAG00000022696pabpn17996.537ENSAPEG00000009623pabpn19996.537Amphiprion_percula
ENSPLAG00000022696pabpn17996.970ENSATEG00000020531pabpn19996.970Anabas_testudineus
ENSPLAG00000022696pabpn16384.574ENSACAG00000006185-8071.849Anolis_carolinensis
ENSPLAG00000022696pabpn16682.143ENSANAG00000024513-8074.459Aotus_nancymaae
ENSPLAG00000022696pabpn110095.502ENSACLG00000016374pabpn110095.502Astatotilapia_calliptera
ENSPLAG00000022696pabpn110086.760ENSAMXG00000000452pabpn19996.121Astyanax_mexicanus
ENSPLAG00000022696pabpn16682.143ENSBTAG00000006884PABPN18568.504Bos_taurus
ENSPLAG00000022696pabpn16083.429ENSBTAG00000050594-7678.894Bos_taurus
ENSPLAG00000022696pabpn16481.579ENSBTAG00000053753-6782.320Bos_taurus
ENSPLAG00000022696pabpn15058.904WBGene00003904pabp-28655.307Caenorhabditis_elegans
ENSPLAG00000022696pabpn15678.313ENSCJAG00000004407-7878.981Callithrix_jacchus
ENSPLAG00000022696pabpn17874.459ENSCJAG00000007960-7975.225Callithrix_jacchus
ENSPLAG00000022696pabpn16880.882ENSCAFG00000011482PABPN18269.565Canis_familiaris
ENSPLAG00000022696pabpn16880.882ENSCAFG00020006651-8269.170Canis_lupus_dingo
ENSPLAG00000022696pabpn16880.882ENSCAFG00020007298-8269.170Canis_lupus_dingo
ENSPLAG00000022696pabpn16880.882ENSCHIG00000012184PABPN18269.170Capra_hircus
ENSPLAG00000022696pabpn17870.996ENSTSYG00000033996BCL2L2-PABPN18780.892Carlito_syrichta
ENSPLAG00000022696pabpn16880.882ENSCPOG00000025574PABPN16780.676Cavia_porcellus
ENSPLAG00000022696pabpn17874.459ENSCCAG00000033954BCL2L2-PABPN17975.225Cebus_capucinus
ENSPLAG00000022696pabpn17874.459ENSCATG00000038536BCL2L2-PABPN17975.225Cercocebus_atys
ENSPLAG00000022696pabpn15179.333ENSCLAG00000012423PABPN15280.714Chinchilla_lanigera
ENSPLAG00000022696pabpn16879.412ENSCSAG00000016036PABPN18267.717Chlorocebus_sabaeus
ENSPLAG00000022696pabpn17071.154ENSCHOG00000004798BCL2L2-PABPN18769.378Choloepus_hoffmanni
ENSPLAG00000022696pabpn15682.530ENSCPBG00000026060-8783.439Chrysemys_picta_bellii
ENSPLAG00000022696pabpn17060.000ENSCING00000012468-7468.263Ciona_intestinalis
ENSPLAG00000022696pabpn16061.017ENSCSAVG00000002001-7371.545Ciona_savignyi
ENSPLAG00000022696pabpn16670.103ENSCANG00000030980-8363.319Colobus_angolensis_palliatus
ENSPLAG00000022696pabpn17870.996ENSCANG00000009750BCL2L2-PABPN18780.892Colobus_angolensis_palliatus
ENSPLAG00000022696pabpn16880.392ENSCGRG00001019696Pabpn18780.255Cricetulus_griseus_chok1gshd
ENSPLAG00000022696pabpn15190.476ENSCGRG00000011102Pabpn19091.034Cricetulus_griseus_crigri
ENSPLAG00000022696pabpn18395.902ENSCSEG00000008774pabpn19995.671Cynoglossus_semilaevis
ENSPLAG00000022696pabpn110097.619ENSCVAG00000003152pabpn110097.619Cyprinodon_variegatus
ENSPLAG00000022696pabpn16157.143ENSDARG00000087996pabpn1l7267.521Danio_rerio
ENSPLAG00000022696pabpn110095.455ENSDARG00000045373pabpn110095.890Danio_rerio
ENSPLAG00000022696pabpn16880.882ENSDNOG00000023682PABPN18269.170Dasypus_novemcinctus
ENSPLAG00000022696pabpn16880.392ENSDORG00000028966-8268.775Dipodomys_ordii
ENSPLAG00000022696pabpn17656.957FBgn0005648Pabp28262.703Drosophila_melanogaster
ENSPLAG00000022696pabpn17872.414ENSEBUG00000002322pabpn19772.609Eptatretus_burgeri
ENSPLAG00000022696pabpn16881.373ENSEASG00005011716PABPN18669.202Equus_asinus_asinus
ENSPLAG00000022696pabpn16781.633ENSECAG00000011652PABPN18569.291Equus_caballus
ENSPLAG00000022696pabpn16878.922ENSEEUG00000012973-6977.451Erinaceus_europaeus
ENSPLAG00000022696pabpn17992.766ENSELUG00000022654pabpn19992.766Esox_lucius
ENSPLAG00000022696pabpn16880.882ENSFCAG00000031922PABPN18269.170Felis_catus
ENSPLAG00000022696pabpn15680.120ENSFDAG00000018381BCL2L2-PABPN19280.120Fukomys_damarensis
ENSPLAG00000022696pabpn17897.297ENSFHEG00000007215pabpn19996.104Fundulus_heteroclitus
ENSPLAG00000022696pabpn110092.308ENSGMOG00000003922pabpn110093.706Gadus_morhua
ENSPLAG00000022696pabpn16184.270ENSGALG00000052930-6279.909Gallus_gallus
ENSPLAG00000022696pabpn17999.134ENSGAFG00000017099pabpn19999.134Gambusia_affinis
ENSPLAG00000022696pabpn110095.804ENSGACG00000002167pabpn110095.804Gasterosteus_aculeatus
ENSPLAG00000022696pabpn17874.459ENSGGOG00000022683-7975.225Gorilla_gorilla
ENSPLAG00000022696pabpn17463.948ENSGGOG00000025919-9365.493Gorilla_gorilla
ENSPLAG00000022696pabpn17067.961ENSGGOG00000039675-8764.502Gorilla_gorilla
ENSPLAG00000022696pabpn17996.970ENSHBUG00000019523pabpn19996.970Haplochromis_burtoni
ENSPLAG00000022696pabpn16880.392ENSHGLG00000002927-9191.034Heterocephalus_glaber_female
ENSPLAG00000022696pabpn16473.158ENSHGLG00000018588-6969.849Heterocephalus_glaber_female
ENSPLAG00000022696pabpn15660.843ENSHGLG00000009842-8762.581Heterocephalus_glaber_female
ENSPLAG00000022696pabpn17770.721ENSHGLG00100006673-9191.034Heterocephalus_glaber_male
ENSPLAG00000022696pabpn16473.158ENSHGLG00100015565-8662.083Heterocephalus_glaber_male
ENSPLAG00000022696pabpn15667.251ENSHGLG00100018935-8873.418Heterocephalus_glaber_male
ENSPLAG00000022696pabpn17996.104ENSHCOG00000004655pabpn19996.104Hippocampus_comes
ENSPLAG00000022696pabpn110085.034ENSIPUG00000008085PABPN19993.506Ictalurus_punctatus
ENSPLAG00000022696pabpn17987.013ENSIPUG00000000180-9887.013Ictalurus_punctatus
ENSPLAG00000022696pabpn15680.120ENSSTOG00000029847BCL2L2-PABPN18780.892Ictidomys_tridecemlineatus
ENSPLAG00000022696pabpn15680.120ENSJJAG00000023507Gm205218780.892Jaculus_jaculus
ENSPLAG00000022696pabpn110097.561ENSKMAG00000018748pabpn110097.561Kryptolebias_marmoratus
ENSPLAG00000022696pabpn110097.203ENSLBEG00000027266pabpn110097.203Labrus_bergylta
ENSPLAG00000022696pabpn16284.444ENSLACG00000000646pabpn19475.225Latimeria_chalumnae
ENSPLAG00000022696pabpn110091.319ENSLOCG00000000796pabpn110089.583Lepisosteus_oculatus
ENSPLAG00000022696pabpn16667.188ENSLOCG00000004694pabpn1l7870.060Lepisosteus_oculatus
ENSPLAG00000022696pabpn15180.000ENSLAFG00000031227-9181.429Loxodonta_africana
ENSPLAG00000022696pabpn17870.996ENSMFAG00000032183BCL2L2-PABPN18780.892Macaca_fascicularis
ENSPLAG00000022696pabpn16766.502ENSMMUG00000048382-6566.162Macaca_mulatta
ENSPLAG00000022696pabpn17870.996ENSMMUG00000014747BCL2L2-PABPN19280.882Macaca_mulatta
ENSPLAG00000022696pabpn17874.459ENSMNEG00000045065BCL2L2-PABPN17975.225Macaca_nemestrina
ENSPLAG00000022696pabpn16267.391ENSMNEG00000035750-9072.519Macaca_nemestrina
ENSPLAG00000022696pabpn15664.242ENSMLEG00000034623-9270.896Mandrillus_leucophaeus
ENSPLAG00000022696pabpn17870.996ENSMLEG00000043862BCL2L2-PABPN18780.892Mandrillus_leucophaeus
ENSPLAG00000022696pabpn110096.599ENSMAMG00000007979pabpn110096.599Mastacembelus_armatus
ENSPLAG00000022696pabpn110097.902ENSMZEG00005011904pabpn110097.902Maylandia_zebra
ENSPLAG00000022696pabpn17870.996ENSMAUG00000007383Gm205218369.048Mesocricetus_auratus
ENSPLAG00000022696pabpn17875.000ENSMICG00000010002BCL2L2-PABPN17976.000Microcebus_murinus
ENSPLAG00000022696pabpn17870.563ENSMOCG00000018557Gm205218891.034Microtus_ochrogaster
ENSPLAG00000022696pabpn110098.252ENSMMOG00000005405pabpn110098.252Mola_mola
ENSPLAG00000022696pabpn16878.922ENSMODG00000004535-8668.441Monodelphis_domestica
ENSPLAG00000022696pabpn110096.853ENSMALG00000019612pabpn110096.853Monopterus_albus
ENSPLAG00000022696pabpn16879.902MGP_CAROLIEiJ_G0019277Pabpn18891.034Mus_caroli
ENSPLAG00000022696pabpn17870.563MGP_CAROLIEiJ_G0019276Gm205216670.721Mus_caroli
ENSPLAG00000022696pabpn16880.392ENSMUSG00000022194Pabpn18891.034Mus_musculus
ENSPLAG00000022696pabpn17870.996ENSMUSG00000092232Gm205216671.171Mus_musculus
ENSPLAG00000022696pabpn16880.392MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSPLAG00000022696pabpn17870.996MGP_PahariEiJ_G0030294Gm205216671.171Mus_pahari
ENSPLAG00000022696pabpn17870.996MGP_SPRETEiJ_G0020165Gm205216671.171Mus_spretus
ENSPLAG00000022696pabpn16880.392MGP_SPRETEiJ_G0020166Pabpn18891.034Mus_spretus
ENSPLAG00000022696pabpn15480.892ENSMPUG00000006775-9280.892Mustela_putorius_furo
ENSPLAG00000022696pabpn16479.255ENSMLUG00000012452-6877.885Myotis_lucifugus
ENSPLAG00000022696pabpn16381.383ENSMLUG00000003800-9482.123Myotis_lucifugus
ENSPLAG00000022696pabpn16679.592ENSMLUG00000028677-8072.000Myotis_lucifugus
ENSPLAG00000022696pabpn17871.429ENSNGAG00000019529Gm205216671.622Nannospalax_galili
ENSPLAG00000022696pabpn110097.552ENSNBRG00000023955pabpn110097.552Neolamprologus_brichardi
ENSPLAG00000022696pabpn16866.829ENSNLEG00000030598-7267.172Nomascus_leucogenys
ENSPLAG00000022696pabpn17870.996ENSNLEG00000015007-7081.313Nomascus_leucogenys
ENSPLAG00000022696pabpn15057.143ENSNLEG00000035292-9460.294Nomascus_leucogenys
ENSPLAG00000022696pabpn16070.621ENSODEG00000011555-8171.895Octodon_degus
ENSPLAG00000022696pabpn17870.563ENSODEG00000002083BCL2L2-PABPN16480.808Octodon_degus
ENSPLAG00000022696pabpn16871.782ENSODEG00000003739-8361.789Octodon_degus
ENSPLAG00000022696pabpn110097.552ENSONIG00000008112pabpn110097.552Oreochromis_niloticus
ENSPLAG00000022696pabpn15080.822ENSOANG00000009218-9282.353Ornithorhynchus_anatinus
ENSPLAG00000022696pabpn16880.392ENSOCUG00000016174PABPN19069.048Oryctolagus_cuniculus
ENSPLAG00000022696pabpn110097.279ENSORLG00000027900pabpn110097.279Oryzias_latipes
ENSPLAG00000022696pabpn110097.279ENSORLG00020004681pabpn110097.279Oryzias_latipes_hni
ENSPLAG00000022696pabpn110097.279ENSORLG00015000018pabpn110097.279Oryzias_latipes_hsok
ENSPLAG00000022696pabpn110097.203ENSOMEG00000016618pabpn110097.203Oryzias_melastigma
ENSPLAG00000022696pabpn16880.882ENSOGAG00000008710PABPN18269.170Otolemur_garnettii
ENSPLAG00000022696pabpn17870.996ENSOARG00000019336BCL2L2-PABPN16171.171Ovis_aries
ENSPLAG00000022696pabpn17870.996ENSPPAG00000028984BCL2L2-PABPN19280.892Pan_paniscus
ENSPLAG00000022696pabpn15665.244ENSPPAG00000039421-8765.605Pan_paniscus
ENSPLAG00000022696pabpn16880.882ENSPPRG00000010567PABPN18269.170Panthera_pardus
ENSPLAG00000022696pabpn15680.120ENSPTIG00000001063BCL2L2-PABPN18780.892Panthera_tigris_altaica
ENSPLAG00000022696pabpn17874.459ENSPTRG00000006167BCL2L27975.225Pan_troglodytes
ENSPLAG00000022696pabpn17961.638ENSPTRG00000047273-8959.259Pan_troglodytes
ENSPLAG00000022696pabpn16667.857ENSPANG00000023326-9073.282Papio_anubis
ENSPLAG00000022696pabpn17874.459ENSPANG00000021100BCL2L2-PABPN17975.225Papio_anubis
ENSPLAG00000022696pabpn15670.807ENSPKIG00000008340pabpn1l7471.812Paramormyrops_kingsleyae
ENSPLAG00000022696pabpn110088.153ENSPKIG00000018052pabpn19992.641Paramormyrops_kingsleyae
ENSPLAG00000022696pabpn110094.406ENSPKIG00000008144-10093.357Paramormyrops_kingsleyae
ENSPLAG00000022696pabpn110091.608ENSPMGG00000022027pabpn110091.608Periophthalmus_magnuspinnatus
ENSPLAG00000022696pabpn17870.996ENSPEMG00000008332Gm205218891.034Peromyscus_maniculatus_bairdii
ENSPLAG00000022696pabpn16475.269ENSPMAG00000006212pabpn19469.130Petromyzon_marinus
ENSPLAG00000022696pabpn16878.431ENSPCIG00000027751-8268.379Phascolarctos_cinereus
ENSPLAG00000022696pabpn110099.320ENSPFOG00000010351pabpn110099.320Poecilia_formosa
ENSPLAG00000022696pabpn17998.701ENSPMEG00000020856pabpn19998.701Poecilia_mexicana
ENSPLAG00000022696pabpn110099.650ENSPREG00000011278pabpn110099.650Poecilia_reticulata
ENSPLAG00000022696pabpn16681.538ENSPPYG00000005663PABPN18969.170Pongo_abelii
ENSPLAG00000022696pabpn16568.394ENSPCAG00000005902PABPN18558.730Procavia_capensis
ENSPLAG00000022696pabpn17875.000ENSPCOG00000028047BCL2L2-PABPN17976.000Propithecus_coquereli
ENSPLAG00000022696pabpn16979.227ENSPVAG00000005270PABPN18268.254Pteropus_vampyrus
ENSPLAG00000022696pabpn17996.970ENSPNYG00000013182pabpn19996.970Pundamilia_nyererei
ENSPLAG00000022696pabpn15569.620ENSPNAG00000021666pabpn1l7970.186Pygocentrus_nattereri
ENSPLAG00000022696pabpn110095.455ENSPNAG00000023526pabpn19996.104Pygocentrus_nattereri
ENSPLAG00000022696pabpn16880.392ENSRNOG00000042195Pabpn18169.323Rattus_norvegicus
ENSPLAG00000022696pabpn17070.813ENSRBIG00000039547-7865.258Rhinopithecus_bieti
ENSPLAG00000022696pabpn17771.171ENSRBIG00000040762BCL2L2-PABPN16871.171Rhinopithecus_bieti
ENSPLAG00000022696pabpn16969.565ENSRBIG00000042811-8769.903Rhinopithecus_bieti
ENSPLAG00000022696pabpn16965.403ENSRROG00000036409-6166.337Rhinopithecus_roxellana
ENSPLAG00000022696pabpn17771.171ENSRROG00000045535BCL2L2-PABPN18780.892Rhinopithecus_roxellana
ENSPLAG00000022696pabpn16970.732ENSRROG00000040409-7865.258Rhinopithecus_roxellana
ENSPLAG00000022696pabpn17867.213ENSSBOG00000026930BCL2L2-PABPN19280.892Saimiri_boliviensis_boliviensis
ENSPLAG00000022696pabpn17860.759ENSSHAG00000007707-9857.806Sarcophilus_harrisii
ENSPLAG00000022696pabpn16381.383ENSSHAG00000014841-8182.123Sarcophilus_harrisii
ENSPLAG00000022696pabpn15073.944ENSSFOG00015015833pabpn1l8358.416Scleropages_formosus
ENSPLAG00000022696pabpn110087.805ENSSFOG00015012565pabpn110086.760Scleropages_formosus
ENSPLAG00000022696pabpn17994.805ENSSFOG00015014718pabpn19993.074Scleropages_formosus
ENSPLAG00000022696pabpn110097.552ENSSMAG00000020157pabpn110097.552Scophthalmus_maximus
ENSPLAG00000022696pabpn110097.279ENSSDUG00000020582pabpn110097.279Seriola_dumerili
ENSPLAG00000022696pabpn17996.970ENSSLDG00000007118pabpn19996.970Seriola_lalandi_dorsalis
ENSPLAG00000022696pabpn15185.714ENSSPUG00000018308-8784.076Sphenodon_punctatus
ENSPLAG00000022696pabpn110096.864ENSSPAG00000021658pabpn110096.864Stegastes_partitus
ENSPLAG00000022696pabpn17361.290ENSSSCG00000034805-7560.733Sus_scrofa
ENSPLAG00000022696pabpn16881.373ENSSSCG00000002023PABPN18669.202Sus_scrofa
ENSPLAG00000022696pabpn110095.804ENSTRUG00000023664pabpn110095.804Takifugu_rubripes
ENSPLAG00000022696pabpn17195.567ENSTNIG00000005369pabpn19395.567Tetraodon_nigroviridis
ENSPLAG00000022696pabpn16880.882ENSUAMG00000024460PABPN16481.313Ursus_americanus
ENSPLAG00000022696pabpn17871.429ENSUMAG00000014288BCL2L2-PABPN15682.979Ursus_maritimus
ENSPLAG00000022696pabpn17870.996ENSVVUG00000019912BCL2L2-PABPN17181.967Vulpes_vulpes
ENSPLAG00000022696pabpn16682.051ENSXETG00000014597pabpn16980.583Xenopus_tropicalis
ENSPLAG00000022696pabpn15986.047ENSXCOG00000005158pabpn19686.047Xiphophorus_couchianus
ENSPLAG00000022696pabpn110099.320ENSXMAG00000006196pabpn110099.320Xiphophorus_maculatus

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