EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000022908 (Gene tree)
Gene ID: 106953977
Gene Symbol: -
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 24536 bases
Position: chrKQ545933.1:275270-299805
Accession: 106953977
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000018309	PIN_4	PF13638.6	4.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000027769	-	4645	XM_015043148	ENSPLAP00000018309	965 (aa)	XP_014898634	UPI00072E6DD7

Gene Model

Click here to download ENSPLAG00000022908's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000022908's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000022908	-	60	31.901	ENSG00000116668	SWT1	61	31.901	Homo_sapiens
ENSPLAG00000022908	-	98	50.714	ENSAPOG00000014897	-	99	50.604	Acanthochromis_polyacanthus
ENSPLAG00000022908	-	68	31.609	ENSAMEG00000013585	SWT1	72	31.609	Ailuropoda_melanoleuca
ENSPLAG00000022908	-	97	49.381	ENSAOCG00000013932	swt1	100	49.147	Amphiprion_ocellaris
ENSPLAG00000022908	-	98	49.491	ENSAPEG00000009613	-	100	49.500	Amphiprion_percula
ENSPLAG00000022908	-	98	48.618	ENSATEG00000018946	swt1	99	48.896	Anabas_testudineus
ENSPLAG00000022908	-	58	36.410	ENSAPLG00000008607	SWT1	74	36.410	Anas_platyrhynchos
ENSPLAG00000022908	-	59	33.841	ENSACAG00000002276	SWT1	64	33.841	Anolis_carolinensis
ENSPLAG00000022908	-	58	33.048	ENSANAG00000027068	SWT1	59	33.048	Aotus_nancymaae
ENSPLAG00000022908	-	76	62.591	ENSACLG00000009742	swt1	93	63.736	Astatotilapia_calliptera
ENSPLAG00000022908	-	61	44.959	ENSAMXG00000010971	swt1	76	38.964	Astyanax_mexicanus
ENSPLAG00000022908	-	58	33.049	ENSCJAG00000005544	SWT1	59	33.049	Callithrix_jacchus
ENSPLAG00000022908	-	58	33.673	ENSCAFG00000013543	SWT1	61	33.388	Canis_familiaris
ENSPLAG00000022908	-	60	33.388	ENSCAFG00020015648	SWT1	64	33.333	Canis_lupus_dingo
ENSPLAG00000022908	-	58	32.765	ENSCHIG00000023511	SWT1	92	32.264	Capra_hircus
ENSPLAG00000022908	-	62	32.907	ENSTSYG00000010470	SWT1	64	32.907	Carlito_syrichta
ENSPLAG00000022908	-	54	33.818	ENSCPOG00000014251	SWT1	62	33.818	Cavia_porcellus
ENSPLAG00000022908	-	58	32.709	ENSCCAG00000033926	SWT1	59	32.709	Cebus_capucinus
ENSPLAG00000022908	-	60	32.343	ENSCATG00000042210	SWT1	95	32.295	Cercocebus_atys
ENSPLAG00000022908	-	58	33.051	ENSCLAG00000013959	SWT1	61	33.051	Chinchilla_lanigera
ENSPLAG00000022908	-	60	32.343	ENSCSAG00000012895	SWT1	61	32.343	Chlorocebus_sabaeus
ENSPLAG00000022908	-	58	34.753	ENSCPBG00000015691	SWT1	60	34.923	Chrysemys_picta_bellii
ENSPLAG00000022908	-	60	32.113	ENSCANG00000032207	SWT1	95	32.113	Colobus_angolensis_palliatus
ENSPLAG00000022908	-	60	34.095	ENSCGRG00001022955	Swt1	65	34.095	Cricetulus_griseus_chok1gshd
ENSPLAG00000022908	-	60	34.095	ENSCGRG00000010224	Swt1	62	34.095	Cricetulus_griseus_crigri
ENSPLAG00000022908	-	62	59.046	ENSCSEG00000017352	swt1	78	59.046	Cynoglossus_semilaevis
ENSPLAG00000022908	-	59	45.876	ENSDARG00000094010	swt1	56	45.876	Danio_rerio
ENSPLAG00000022908	-	51	31.915	ENSDNOG00000005254	SWT1	58	31.915	Dasypus_novemcinctus
ENSPLAG00000022908	-	58	32.709	ENSDORG00000010531	Swt1	64	33.727	Dipodomys_ordii
ENSPLAG00000022908	-	58	33.677	ENSEASG00005005530	SWT1	63	33.276	Equus_asinus_asinus
ENSPLAG00000022908	-	59	49.915	ENSELUG00000020565	swt1	56	49.830	Esox_lucius
ENSPLAG00000022908	-	58	33.733	ENSFCAG00000011286	SWT1	60	33.733	Felis_catus
ENSPLAG00000022908	-	62	33.914	ENSFALG00000003206	SWT1	65	33.914	Ficedula_albicollis
ENSPLAG00000022908	-	58	34.524	ENSFDAG00000007569	SWT1	61	34.524	Fukomys_damarensis
ENSPLAG00000022908	-	100	88.187	ENSGAFG00000007803	-	100	88.187	Gambusia_affinis
ENSPLAG00000022908	-	59	35.517	ENSGAGG00000025050	SWT1	93	35.800	Gopherus_agassizii
ENSPLAG00000022908	-	53	32.463	ENSGGOG00000041167	-	90	32.463	Gorilla_gorilla
ENSPLAG00000022908	-	79	62.457	ENSHBUG00000006188	swt1	93	63.542	Haplochromis_burtoni
ENSPLAG00000022908	-	58	34.872	ENSHGLG00000006542	SWT1	63	34.872	Heterocephalus_glaber_female
ENSPLAG00000022908	-	58	35.214	ENSHGLG00100014408	SWT1	61	35.214	Heterocephalus_glaber_male
ENSPLAG00000022908	-	58	44.271	ENSIPUG00000009113	-	56	44.271	Ictalurus_punctatus
ENSPLAG00000022908	-	68	32.194	ENSSTOG00000010356	SWT1	74	32.194	Ictidomys_tridecemlineatus
ENSPLAG00000022908	-	58	34.075	ENSJJAG00000015927	Swt1	63	34.075	Jaculus_jaculus
ENSPLAG00000022908	-	99	50.854	ENSKMAG00000012533	swt1	99	50.452	Kryptolebias_marmoratus
ENSPLAG00000022908	-	95	47.786	ENSLBEG00000020663	-	99	47.368	Labrus_bergylta
ENSPLAG00000022908	-	60	36.913	ENSLACG00000009194	SWT1	79	36.913	Latimeria_chalumnae
ENSPLAG00000022908	-	58	40.704	ENSLOCG00000001749	swt1	99	40.862	Lepisosteus_oculatus
ENSPLAG00000022908	-	58	32.095	ENSLAFG00000004346	-	93	32.095	Loxodonta_africana
ENSPLAG00000022908	-	60	33.168	ENSMFAG00000031793	SWT1	96	33.168	Macaca_fascicularis
ENSPLAG00000022908	-	60	32.888	ENSMMUG00000013882	SWT1	95	32.888	Macaca_mulatta
ENSPLAG00000022908	-	60	33.223	ENSMNEG00000035502	SWT1	96	33.168	Macaca_nemestrina
ENSPLAG00000022908	-	60	32.131	ENSMLEG00000038692	SWT1	95	32.131	Mandrillus_leucophaeus
ENSPLAG00000022908	-	79	62.284	ENSMZEG00005018489	swt1	93	63.368	Maylandia_zebra
ENSPLAG00000022908	-	58	36.594	ENSMGAG00000000973	SWT1	93	36.594	Meleagris_gallopavo
ENSPLAG00000022908	-	60	30.457	ENSMAUG00000007996	Swt1	59	30.457	Mesocricetus_auratus
ENSPLAG00000022908	-	60	33.777	ENSMICG00000014975	SWT1	62	33.777	Microcebus_murinus
ENSPLAG00000022908	-	68	31.897	ENSMOCG00000009776	Swt1	72	31.897	Microtus_ochrogaster
ENSPLAG00000022908	-	58	33.447	ENSMODG00000007472	SWT1	59	33.447	Monodelphis_domestica
ENSPLAG00000022908	-	98	47.614	ENSMALG00000019308	swt1	99	47.667	Monopterus_albus
ENSPLAG00000022908	-	59	34.642	MGP_CAROLIEiJ_G0014692	Swt1	64	45.625	Mus_caroli
ENSPLAG00000022908	-	59	33.959	ENSMUSG00000052748	Swt1	78	40.000	Mus_musculus
ENSPLAG00000022908	-	60	33.445	MGP_PahariEiJ_G0027928	Swt1	69	43.678	Mus_pahari
ENSPLAG00000022908	-	59	34.471	MGP_SPRETEiJ_G0015499	Swt1	79	41.000	Mus_spretus
ENSPLAG00000022908	-	62	34.138	ENSMPUG00000011913	SWT1	64	34.138	Mustela_putorius_furo
ENSPLAG00000022908	-	58	32.995	ENSMLUG00000001142	SWT1	59	32.995	Myotis_lucifugus
ENSPLAG00000022908	-	59	34.412	ENSNGAG00000021080	Swt1	60	34.412	Nannospalax_galili
ENSPLAG00000022908	-	60	31.395	ENSNLEG00000018031	SWT1	61	31.395	Nomascus_leucogenys
ENSPLAG00000022908	-	80	62.126	ENSONIG00000009994	swt1	94	63.289	Oreochromis_niloticus
ENSPLAG00000022908	-	58	32.318	ENSOANG00000001013	-	69	32.318	Ornithorhynchus_anatinus
ENSPLAG00000022908	-	68	32.528	ENSOCUG00000004901	SWT1	72	32.528	Oryctolagus_cuniculus
ENSPLAG00000022908	-	96	48.201	ENSORLG00000009682	swt1	99	47.752	Oryzias_latipes
ENSPLAG00000022908	-	98	48.133	ENSORLG00020011654	swt1	99	47.956	Oryzias_latipes_hni
ENSPLAG00000022908	-	96	48.510	ENSORLG00015007734	swt1	99	48.159	Oryzias_latipes_hsok
ENSPLAG00000022908	-	96	49.020	ENSOMEG00000006607	swt1	99	48.754	Oryzias_melastigma
ENSPLAG00000022908	-	60	33.828	ENSOGAG00000016195	SWT1	62	33.828	Otolemur_garnettii
ENSPLAG00000022908	-	58	32.594	ENSOARG00000004156	SWT1	59	32.594	Ovis_aries
ENSPLAG00000022908	-	60	31.901	ENSPPAG00000021400	SWT1	61	31.901	Pan_paniscus
ENSPLAG00000022908	-	58	33.904	ENSPPRG00000023754	SWT1	60	33.904	Panthera_pardus
ENSPLAG00000022908	-	58	33.904	ENSPTIG00000021889	SWT1	60	33.904	Panthera_tigris_altaica
ENSPLAG00000022908	-	60	32.066	ENSPTRG00000001777	SWT1	61	32.066	Pan_troglodytes
ENSPLAG00000022908	-	60	32.897	ENSPANG00000005099	SWT1	95	32.897	Papio_anubis
ENSPLAG00000022908	-	59	45.267	ENSPKIG00000005979	swt1	58	45.267	Paramormyrops_kingsleyae
ENSPLAG00000022908	-	61	34.198	ENSPSIG00000008961	SWT1	62	34.198	Pelodiscus_sinensis
ENSPLAG00000022908	-	54	44.253	ENSPMGG00000000152	-	84	39.329	Periophthalmus_magnuspinnatus
ENSPLAG00000022908	-	60	34.500	ENSPEMG00000008208	Swt1	61	34.500	Peromyscus_maniculatus_bairdii
ENSPLAG00000022908	-	60	32.520	ENSPCIG00000002443	SWT1	62	32.520	Phascolarctos_cinereus
ENSPLAG00000022908	-	100	99.482	ENSPFOG00000010988	-	100	99.482	Poecilia_formosa
ENSPLAG00000022908	-	100	98.656	ENSPMEG00000006943	-	100	98.656	Poecilia_mexicana
ENSPLAG00000022908	-	67	95.209	ENSPREG00000014723	-	92	95.209	Poecilia_reticulata
ENSPLAG00000022908	-	61	32.630	ENSPPYG00000000415	SWT1	62	32.630	Pongo_abelii
ENSPLAG00000022908	-	58	31.687	ENSPVAG00000005968	SWT1	60	31.687	Pteropus_vampyrus
ENSPLAG00000022908	-	79	62.457	ENSPNYG00000012934	swt1	93	63.542	Pundamilia_nyererei
ENSPLAG00000022908	-	58	47.222	ENSPNAG00000017795	swt1	56	47.222	Pygocentrus_nattereri
ENSPLAG00000022908	-	60	33.609	ENSRNOG00000032258	Swt1	72	32.051	Rattus_norvegicus
ENSPLAG00000022908	-	60	32.328	ENSRBIG00000040630	SWT1	95	32.161	Rhinopithecus_bieti
ENSPLAG00000022908	-	72	30.972	ENSSBOG00000028825	SWT1	74	30.972	Saimiri_boliviensis_boliviensis
ENSPLAG00000022908	-	58	34.583	ENSSHAG00000009241	SWT1	60	34.583	Sarcophilus_harrisii
ENSPLAG00000022908	-	58	46.060	ENSSFOG00015004895	swt1	55	45.979	Scleropages_formosus
ENSPLAG00000022908	-	67	57.380	ENSSMAG00000020761	-	57	56.528	Scophthalmus_maximus
ENSPLAG00000022908	-	98	51.029	ENSSDUG00000012345	swt1	99	51.113	Seriola_dumerili
ENSPLAG00000022908	-	98	51.029	ENSSLDG00000003821	swt1	99	51.113	Seriola_lalandi_dorsalis
ENSPLAG00000022908	-	60	35.362	ENSSPUG00000003899	SWT1	61	35.362	Sphenodon_punctatus
ENSPLAG00000022908	-	97	51.340	ENSSPAG00000001030	swt1	99	51.156	Stegastes_partitus
ENSPLAG00000022908	-	59	33.841	ENSSSCG00000015569	SWT1	62	34.349	Sus_scrofa
ENSPLAG00000022908	-	58	34.983	ENSTGUG00000003718	-	97	34.983	Taeniopygia_guttata
ENSPLAG00000022908	-	99	42.990	ENSTRUG00000006420	swt1	99	42.990	Takifugu_rubripes
ENSPLAG00000022908	-	58	32.767	ENSTTRG00000005914	SWT1	60	32.767	Tursiops_truncatus
ENSPLAG00000022908	-	68	31.662	ENSUAMG00000020937	SWT1	78	31.556	Ursus_americanus
ENSPLAG00000022908	-	68	31.223	ENSUMAG00000021918	SWT1	74	31.213	Ursus_maritimus
ENSPLAG00000022908	-	58	33.673	ENSVVUG00000009182	SWT1	62	33.673	Vulpes_vulpes
ENSPLAG00000022908	-	100	90.279	ENSXMAG00000023472	-	100	90.279	Xiphophorus_maculatus