EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000022994 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3271 bases
Position: chrKQ546846.1:25791-29061
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000031196	RVT_1	PF00078.27	1.6e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000027861	-	3168	-	ENSPLAP00000031196	1055 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000022994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000022994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000022994	-	94	67.508	ENSPLAG00000011817	-	99	67.608
ENSPLAG00000022994	-	78	84.812	ENSPLAG00000023379	-	99	84.812
ENSPLAG00000022994	-	98	100.000	ENSPLAG00000011810	-	98	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000022994	-	85	41.868	ENSACIG00000013116	-	88	42.042	Amphilophus_citrinellus
ENSPLAG00000022994	-	80	42.160	ENSACIG00000009025	-	97	42.160	Amphilophus_citrinellus
ENSPLAG00000022994	-	98	37.261	ENSACIG00000012161	-	92	37.261	Amphilophus_citrinellus
ENSPLAG00000022994	-	88	41.151	ENSACIG00000010787	-	92	41.151	Amphilophus_citrinellus
ENSPLAG00000022994	-	98	39.626	ENSACIG00000007038	-	93	39.925	Amphilophus_citrinellus
ENSPLAG00000022994	-	86	40.025	ENSAMXG00000042811	-	78	40.025	Astyanax_mexicanus
ENSPLAG00000022994	-	84	38.118	ENSCPBG00000003842	-	68	38.118	Chrysemys_picta_bellii
ENSPLAG00000022994	-	96	39.050	ENSCVAG00000004138	-	99	39.050	Cyprinodon_variegatus
ENSPLAG00000022994	-	86	32.595	ENSELUG00000004618	-	85	32.915	Esox_lucius
ENSPLAG00000022994	-	76	37.423	ENSELUG00000004597	-	84	37.023	Esox_lucius
ENSPLAG00000022994	-	95	39.903	ENSFHEG00000022106	-	95	40.039	Fundulus_heteroclitus
ENSPLAG00000022994	-	96	38.100	ENSFHEG00000002865	-	90	38.100	Fundulus_heteroclitus
ENSPLAG00000022994	-	95	40.557	ENSFHEG00000002853	-	90	40.557	Fundulus_heteroclitus
ENSPLAG00000022994	-	90	41.018	ENSFHEG00000007211	-	95	40.100	Fundulus_heteroclitus
ENSPLAG00000022994	-	55	41.908	ENSGMOG00000005227	-	99	41.908	Gadus_morhua
ENSPLAG00000022994	-	95	35.613	ENSHCOG00000007397	-	92	35.613	Hippocampus_comes
ENSPLAG00000022994	-	66	43.662	ENSHCOG00000007436	-	65	43.662	Hippocampus_comes
ENSPLAG00000022994	-	96	34.913	ENSHCOG00000007389	-	94	34.913	Hippocampus_comes
ENSPLAG00000022994	-	77	37.653	ENSHCOG00000000471	-	69	37.653	Hippocampus_comes
ENSPLAG00000022994	-	67	40.189	ENSLBEG00000006732	-	84	40.189	Labrus_bergylta
ENSPLAG00000022994	-	67	40.898	ENSLBEG00000004576	-	84	40.898	Labrus_bergylta
ENSPLAG00000022994	-	75	38.758	ENSLBEG00000003745	-	91	38.758	Labrus_bergylta
ENSPLAG00000022994	-	53	33.511	ENSLACG00000009240	-	96	33.511	Latimeria_chalumnae
ENSPLAG00000022994	-	73	34.474	ENSLACG00000006357	-	98	34.474	Latimeria_chalumnae
ENSPLAG00000022994	-	79	37.945	ENSLOCG00000011928	-	81	37.945	Lepisosteus_oculatus
ENSPLAG00000022994	-	50	38.752	ENSLOCG00000002743	-	100	38.752	Lepisosteus_oculatus
ENSPLAG00000022994	-	96	32.040	ENSLOCG00000017064	-	98	32.040	Lepisosteus_oculatus
ENSPLAG00000022994	-	94	38.246	ENSMAMG00000019985	-	90	38.246	Mastacembelus_armatus
ENSPLAG00000022994	-	98	40.723	ENSONIG00000020875	-	91	40.723	Oreochromis_niloticus
ENSPLAG00000022994	-	95	35.377	ENSOMEG00000015368	-	99	35.674	Oryzias_melastigma
ENSPLAG00000022994	-	83	40.717	ENSPMGG00000001593	-	91	40.717	Periophthalmus_magnuspinnatus
ENSPLAG00000022994	-	87	39.893	ENSPMGG00000017392	-	97	39.893	Periophthalmus_magnuspinnatus
ENSPLAG00000022994	-	99	79.504	ENSPMEG00000008574	-	99	79.504	Poecilia_mexicana
ENSPLAG00000022994	-	98	68.182	ENSPMEG00000003431	-	99	68.375	Poecilia_mexicana
ENSPLAG00000022994	-	97	48.470	ENSPREG00000005456	-	90	48.470	Poecilia_reticulata
ENSPLAG00000022994	-	98	68.732	ENSPREG00000012484	-	92	68.732	Poecilia_reticulata
ENSPLAG00000022994	-	99	49.433	ENSPREG00000005756	-	97	49.433	Poecilia_reticulata
ENSPLAG00000022994	-	68	37.797	ENSPNAG00000014625	-	67	37.797	Pygocentrus_nattereri
ENSPLAG00000022994	-	76	40.511	ENSPNAG00000016635	-	68	40.511	Pygocentrus_nattereri
ENSPLAG00000022994	-	76	41.951	ENSPNAG00000007038	-	72	41.335	Pygocentrus_nattereri
ENSPLAG00000022994	-	77	40.263	ENSPNAG00000003539	-	68	40.263	Pygocentrus_nattereri
ENSPLAG00000022994	-	60	40.644	ENSPNAG00000017596	-	67	40.644	Pygocentrus_nattereri
ENSPLAG00000022994	-	73	41.814	ENSPNAG00000021754	-	67	41.814	Pygocentrus_nattereri
ENSPLAG00000022994	-	96	37.092	ENSXCOG00000013093	-	93	37.092	Xiphophorus_couchianus
ENSPLAG00000022994	-	78	72.871	ENSXCOG00000008881	-	93	72.871	Xiphophorus_couchianus
ENSPLAG00000022994	-	96	66.798	ENSXMAG00000028672	-	92	66.798	Xiphophorus_maculatus