EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000023316 (Gene tree)
Gene ID: -
Gene Symbol: pcbp4
Alias: -
Full Name: poly(rC)-binding protein 4-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 29263 bases
Position: chrKQ546097.1:95136-124398
Accession: 106955994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000018621	KH_1	PF00013.29	4.5e-34	1	2
ENSPLAP00000018621	KH_1	PF00013.29	4.5e-34	2	2
ENSPLAP00000018621	KH_2	PF07650.17	3.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000028151	-	1272	XM_015046507	ENSPLAP00000018621	423 (aa)	XP_014901993	-

Gene Model

Click here to download ENSPLAG00000023316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000023316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000023316	pcbp4	59	55.755	ENSPLAG00000011449	pcbp3	70	55.755
ENSPLAG00000023316	pcbp4	73	65.957	ENSPLAG00000011438	-	87	63.298
ENSPLAG00000023316	pcbp4	62	52.857	ENSPLAG00000004074	-	70	54.511
ENSPLAG00000023316	pcbp4	59	54.864	ENSPLAG00000017518	PCBP2	73	54.440
ENSPLAG00000023316	pcbp4	59	53.696	ENSPLAG00000003153	pcbp2	73	53.282

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000023316	pcbp4	89	51.715	ENSG00000090097	PCBP4	79	52.507	Homo_sapiens
ENSPLAG00000023316	pcbp4	89	70.757	ENSAPOG00000009897	-	93	69.452	Acanthochromis_polyacanthus
ENSPLAG00000023316	pcbp4	89	51.979	ENSAMEG00000009211	PCBP4	79	52.770	Ailuropoda_melanoleuca
ENSPLAG00000023316	pcbp4	89	91.927	ENSACIG00000015264	pcbp4	82	91.927	Amphilophus_citrinellus
ENSPLAG00000023316	pcbp4	89	71.540	ENSACIG00000020434	-	88	69.452	Amphilophus_citrinellus
ENSPLAG00000023316	pcbp4	89	71.279	ENSAOCG00000021366	-	85	69.974	Amphiprion_ocellaris
ENSPLAG00000023316	pcbp4	89	73.475	ENSAOCG00000006924	-	94	71.883	Amphiprion_ocellaris
ENSPLAG00000023316	pcbp4	89	86.719	ENSAPEG00000023157	pcbp4	90	85.677	Amphiprion_percula
ENSPLAG00000023316	pcbp4	66	66.667	ENSAPEG00000009555	-	73	64.062	Amphiprion_percula
ENSPLAG00000023316	pcbp4	89	69.713	ENSATEG00000006511	-	83	68.668	Anabas_testudineus
ENSPLAG00000023316	pcbp4	89	83.069	ENSATEG00000008529	pcbp4	84	82.804	Anabas_testudineus
ENSPLAG00000023316	pcbp4	89	54.974	ENSACAG00000011701	PCBP4	96	53.403	Anolis_carolinensis
ENSPLAG00000023316	pcbp4	89	51.715	ENSANAG00000023072	PCBP4	80	52.507	Aotus_nancymaae
ENSPLAG00000023316	pcbp4	89	86.000	ENSACLG00000013348	pcbp4	80	87.000	Astatotilapia_calliptera
ENSPLAG00000023316	pcbp4	89	71.540	ENSACLG00000025246	-	93	69.974	Astatotilapia_calliptera
ENSPLAG00000023316	pcbp4	89	81.039	ENSAMXG00000033125	pcbp4	80	78.701	Astyanax_mexicanus
ENSPLAG00000023316	pcbp4	89	51.715	ENSBTAG00000018622	PCBP4	79	52.507	Bos_taurus
ENSPLAG00000023316	pcbp4	89	51.715	ENSCJAG00000005783	PCBP4	79	52.507	Callithrix_jacchus
ENSPLAG00000023316	pcbp4	89	51.979	ENSCAFG00000010019	PCBP4	79	52.770	Canis_familiaris
ENSPLAG00000023316	pcbp4	89	51.979	ENSCAFG00020022361	PCBP4	79	52.770	Canis_lupus_dingo
ENSPLAG00000023316	pcbp4	89	51.715	ENSCHIG00000012918	PCBP4	80	52.507	Capra_hircus
ENSPLAG00000023316	pcbp4	89	51.979	ENSTSYG00000008765	PCBP4	80	52.770	Carlito_syrichta
ENSPLAG00000023316	pcbp4	89	50.914	ENSCAPG00000005895	PCBP4	79	51.979	Cavia_aperea
ENSPLAG00000023316	pcbp4	89	51.175	ENSCPOG00000014617	PCBP4	79	52.243	Cavia_porcellus
ENSPLAG00000023316	pcbp4	89	51.715	ENSCCAG00000033268	PCBP4	79	52.507	Cebus_capucinus
ENSPLAG00000023316	pcbp4	89	51.715	ENSCATG00000032034	PCBP4	88	45.327	Cercocebus_atys
ENSPLAG00000023316	pcbp4	89	51.715	ENSCLAG00000008356	PCBP4	79	52.507	Chinchilla_lanigera
ENSPLAG00000023316	pcbp4	89	51.715	ENSCSAG00000013913	PCBP4	79	52.507	Chlorocebus_sabaeus
ENSPLAG00000023316	pcbp4	98	51.074	ENSCPBG00000016554	PCBP4	94	49.642	Chrysemys_picta_bellii
ENSPLAG00000023316	pcbp4	89	51.715	ENSCANG00000038865	PCBP4	88	47.156	Colobus_angolensis_palliatus
ENSPLAG00000023316	pcbp4	89	51.436	ENSCGRG00001014953	Pcbp4	81	52.507	Cricetulus_griseus_chok1gshd
ENSPLAG00000023316	pcbp4	89	51.436	ENSCGRG00000008617	Pcbp4	81	52.507	Cricetulus_griseus_crigri
ENSPLAG00000023316	pcbp4	89	74.242	ENSCSEG00000014487	pcbp4	91	74.495	Cynoglossus_semilaevis
ENSPLAG00000023316	pcbp4	89	66.580	ENSCSEG00000021041	PCBP4	84	64.491	Cynoglossus_semilaevis
ENSPLAG00000023316	pcbp4	89	83.029	ENSCVAG00000003674	pcbp4	86	82.507	Cyprinodon_variegatus
ENSPLAG00000023316	pcbp4	89	70.235	ENSCVAG00000013090	-	85	68.241	Cyprinodon_variegatus
ENSPLAG00000023316	pcbp4	92	79.221	ENSDARG00000024276	pcbp4	99	75.568	Danio_rerio
ENSPLAG00000023316	pcbp4	85	34.771	ENSDNOG00000033951	PCBP4	86	36.658	Dasypus_novemcinctus
ENSPLAG00000023316	pcbp4	89	51.187	ENSDORG00000000573	Pcbp4	79	51.979	Dipodomys_ordii
ENSPLAG00000023316	pcbp4	58	53.309	ENSETEG00000001778	PCBP4	83	53.309	Echinops_telfairi
ENSPLAG00000023316	pcbp4	89	51.715	ENSEASG00005012889	PCBP4	79	52.507	Equus_asinus_asinus
ENSPLAG00000023316	pcbp4	89	51.715	ENSECAG00000024218	PCBP4	79	52.507	Equus_caballus
ENSPLAG00000023316	pcbp4	89	70.207	ENSELUG00000001870	-	94	67.876	Esox_lucius
ENSPLAG00000023316	pcbp4	90	70.750	ENSELUG00000018204	pcbp4	99	55.046	Esox_lucius
ENSPLAG00000023316	pcbp4	89	51.979	ENSFCAG00000009148	PCBP4	79	52.770	Felis_catus
ENSPLAG00000023316	pcbp4	96	46.959	ENSFALG00000008831	PCBP4	94	47.356	Ficedula_albicollis
ENSPLAG00000023316	pcbp4	89	51.436	ENSFDAG00000012692	PCBP4	99	52.880	Fukomys_damarensis
ENSPLAG00000023316	pcbp4	90	55.856	ENSFHEG00000002769	-	86	49.740	Fundulus_heteroclitus
ENSPLAG00000023316	pcbp4	98	63.333	ENSGMOG00000017799	-	96	67.102	Gadus_morhua
ENSPLAG00000023316	pcbp4	89	50.131	ENSGALG00000027695	PCBP4	96	49.482	Gallus_gallus
ENSPLAG00000023316	pcbp4	64	78.623	ENSGAFG00000021090	-	59	78.623	Gambusia_affinis
ENSPLAG00000023316	pcbp4	89	68.571	ENSGACG00000002664	-	96	67.013	Gasterosteus_aculeatus
ENSPLAG00000023316	pcbp4	89	54.712	ENSGAGG00000022116	PCBP4	94	49.642	Gopherus_agassizii
ENSPLAG00000023316	pcbp4	89	51.715	ENSGGOG00000012474	PCBP4	88	44.342	Gorilla_gorilla
ENSPLAG00000023316	pcbp4	89	86.250	ENSHBUG00000009472	pcbp4	80	87.000	Haplochromis_burtoni
ENSPLAG00000023316	pcbp4	89	72.135	ENSHBUG00000005329	-	93	69.713	Haplochromis_burtoni
ENSPLAG00000023316	pcbp4	89	51.436	ENSHGLG00000012018	PCBP4	79	53.003	Heterocephalus_glaber_female
ENSPLAG00000023316	pcbp4	89	51.436	ENSHGLG00100008748	PCBP4	78	52.507	Heterocephalus_glaber_male
ENSPLAG00000023316	pcbp4	73	83.333	ENSHCOG00000010838	-	89	65.206	Hippocampus_comes
ENSPLAG00000023316	pcbp4	89	78.442	ENSIPUG00000008212	pcbp4	80	77.403	Ictalurus_punctatus
ENSPLAG00000023316	pcbp4	89	51.979	ENSSTOG00000002573	PCBP4	81	52.770	Ictidomys_tridecemlineatus
ENSPLAG00000023316	pcbp4	89	51.979	ENSJJAG00000016235	Pcbp4	81	52.770	Jaculus_jaculus
ENSPLAG00000023316	pcbp4	89	89.378	ENSKMAG00000014252	pcbp4	79	89.378	Kryptolebias_marmoratus
ENSPLAG00000023316	pcbp4	89	69.713	ENSKMAG00000017554	-	93	68.668	Kryptolebias_marmoratus
ENSPLAG00000023316	pcbp4	89	70.757	ENSLBEG00000011345	-	93	69.974	Labrus_bergylta
ENSPLAG00000023316	pcbp4	91	57.330	ENSLACG00000015899	PCBP4	92	67.763	Latimeria_chalumnae
ENSPLAG00000023316	pcbp4	89	72.324	ENSLOCG00000013402	pcbp4	80	73.890	Lepisosteus_oculatus
ENSPLAG00000023316	pcbp4	89	51.979	ENSLAFG00000010732	PCBP4	89	52.770	Loxodonta_africana
ENSPLAG00000023316	pcbp4	89	51.715	ENSMFAG00000001431	PCBP4	87	45.863	Macaca_fascicularis
ENSPLAG00000023316	pcbp4	89	51.715	ENSMMUG00000022205	PCBP4	79	52.507	Macaca_mulatta
ENSPLAG00000023316	pcbp4	89	51.715	ENSMNEG00000028553	PCBP4	87	45.863	Macaca_nemestrina
ENSPLAG00000023316	pcbp4	89	51.715	ENSMLEG00000027083	PCBP4	88	45.327	Mandrillus_leucophaeus
ENSPLAG00000023316	pcbp4	98	79.630	ENSMAMG00000010163	pcbp4	80	87.595	Mastacembelus_armatus
ENSPLAG00000023316	pcbp4	89	72.324	ENSMAMG00000011364	-	93	71.018	Mastacembelus_armatus
ENSPLAG00000023316	pcbp4	89	71.540	ENSMZEG00005023631	-	93	69.974	Maylandia_zebra
ENSPLAG00000023316	pcbp4	89	90.625	ENSMZEG00005008852	pcbp4	86	90.625	Maylandia_zebra
ENSPLAG00000023316	pcbp4	72	45.106	ENSMGAG00000003895	-	99	42.979	Meleagris_gallopavo
ENSPLAG00000023316	pcbp4	89	51.436	ENSMAUG00000021064	Pcbp4	79	53.003	Mesocricetus_auratus
ENSPLAG00000023316	pcbp4	89	51.979	ENSMICG00000002686	PCBP4	79	52.770	Microcebus_murinus
ENSPLAG00000023316	pcbp4	89	51.436	ENSMOCG00000013557	Pcbp4	79	53.003	Microtus_ochrogaster
ENSPLAG00000023316	pcbp4	89	69.713	ENSMMOG00000020533	-	83	68.668	Mola_mola
ENSPLAG00000023316	pcbp4	58	68.000	ENSMMOG00000017756	pcbp4	75	68.000	Mola_mola
ENSPLAG00000023316	pcbp4	89	51.958	ENSMODG00000011790	PCBP4	81	52.507	Monodelphis_domestica
ENSPLAG00000023316	pcbp4	98	65.558	ENSMALG00000022117	-	98	69.452	Monopterus_albus
ENSPLAG00000023316	pcbp4	77	89.222	ENSMALG00000020318	pcbp4	69	89.058	Monopterus_albus
ENSPLAG00000023316	pcbp4	89	51.436	MGP_CAROLIEiJ_G0032623	Pcbp4	86	79.412	Mus_caroli
ENSPLAG00000023316	pcbp4	89	51.436	ENSMUSG00000023495	Pcbp4	86	79.412	Mus_musculus
ENSPLAG00000023316	pcbp4	89	51.436	MGP_PahariEiJ_G0015491	Pcbp4	86	79.412	Mus_pahari
ENSPLAG00000023316	pcbp4	89	51.436	MGP_SPRETEiJ_G0033768	-	86	79.412	Mus_spretus
ENSPLAG00000023316	pcbp4	89	51.979	ENSMPUG00000011766	PCBP4	79	52.770	Mustela_putorius_furo
ENSPLAG00000023316	pcbp4	89	51.715	ENSNGAG00000013148	Pcbp4	97	52.507	Nannospalax_galili
ENSPLAG00000023316	pcbp4	89	71.279	ENSNBRG00000015885	-	85	69.713	Neolamprologus_brichardi
ENSPLAG00000023316	pcbp4	87	86.327	ENSNBRG00000007475	pcbp4	90	86.327	Neolamprologus_brichardi
ENSPLAG00000023316	pcbp4	89	51.715	ENSNLEG00000007064	PCBP4	79	52.507	Nomascus_leucogenys
ENSPLAG00000023316	pcbp4	89	45.215	ENSMEUG00000006917	PCBP4	85	45.261	Notamacropus_eugenii
ENSPLAG00000023316	pcbp4	89	47.242	ENSOPRG00000008763	PCBP4	88	47.962	Ochotona_princeps
ENSPLAG00000023316	pcbp4	89	51.175	ENSODEG00000018230	PCBP4	79	52.742	Octodon_degus
ENSPLAG00000023316	pcbp4	89	50.529	ENSOANG00000014110	PCBP4	93	51.323	Ornithorhynchus_anatinus
ENSPLAG00000023316	pcbp4	89	51.979	ENSOCUG00000025336	PCBP4	79	52.770	Oryctolagus_cuniculus
ENSPLAG00000023316	pcbp4	89	81.679	ENSORLG00000003061	pcbp4	92	83.461	Oryzias_latipes
ENSPLAG00000023316	pcbp4	89	69.792	ENSORLG00000009899	-	83	68.490	Oryzias_latipes
ENSPLAG00000023316	pcbp4	89	69.974	ENSORLG00020001183	-	93	68.668	Oryzias_latipes_hni
ENSPLAG00000023316	pcbp4	89	70.496	ENSORLG00015017819	-	93	69.191	Oryzias_latipes_hsok
ENSPLAG00000023316	pcbp4	89	81.108	ENSORLG00015019262	pcbp4	92	82.872	Oryzias_latipes_hsok
ENSPLAG00000023316	pcbp4	89	82.171	ENSOMEG00000003516	-	93	82.171	Oryzias_melastigma
ENSPLAG00000023316	pcbp4	89	71.018	ENSOMEG00000011545	-	93	69.713	Oryzias_melastigma
ENSPLAG00000023316	pcbp4	89	51.979	ENSOGAG00000032384	PCBP4	79	52.770	Otolemur_garnettii
ENSPLAG00000023316	pcbp4	89	51.715	ENSOARG00000006603	PCBP4	87	52.507	Ovis_aries
ENSPLAG00000023316	pcbp4	89	51.715	ENSPPAG00000038764	PCBP4	79	52.507	Pan_paniscus
ENSPLAG00000023316	pcbp4	89	51.979	ENSPPRG00000006165	PCBP4	79	52.770	Panthera_pardus
ENSPLAG00000023316	pcbp4	89	51.979	ENSPTIG00000005401	PCBP4	76	52.770	Panthera_tigris_altaica
ENSPLAG00000023316	pcbp4	89	51.715	ENSPTRG00000014983	PCBP4	79	52.507	Pan_troglodytes
ENSPLAG00000023316	pcbp4	89	51.715	ENSPANG00000026222	PCBP4	88	45.327	Papio_anubis
ENSPLAG00000023316	pcbp4	90	76.227	ENSPKIG00000010244	pcbp4	95	71.529	Paramormyrops_kingsleyae
ENSPLAG00000023316	pcbp4	90	67.442	ENSPKIG00000005487	-	80	65.116	Paramormyrops_kingsleyae
ENSPLAG00000023316	pcbp4	66	56.989	ENSPSIG00000011286	PCBP4	75	55.212	Pelodiscus_sinensis
ENSPLAG00000023316	pcbp4	89	69.974	ENSPMGG00000022732	-	84	68.668	Periophthalmus_magnuspinnatus
ENSPLAG00000023316	pcbp4	89	85.676	ENSPMGG00000000063	pcbp4	87	83.024	Periophthalmus_magnuspinnatus
ENSPLAG00000023316	pcbp4	89	51.715	ENSPEMG00000009276	Pcbp4	79	52.507	Peromyscus_maniculatus_bairdii
ENSPLAG00000023316	pcbp4	89	52.480	ENSPCIG00000018151	PCBP4	92	53.034	Phascolarctos_cinereus
ENSPLAG00000023316	pcbp4	89	71.018	ENSPFOG00000002989	-	80	69.713	Poecilia_formosa
ENSPLAG00000023316	pcbp4	99	82.629	ENSPFOG00000014474	pcbp4	96	93.625	Poecilia_formosa
ENSPLAG00000023316	pcbp4	85	93.380	ENSPMEG00000012990	pcbp4	100	93.380	Poecilia_mexicana
ENSPLAG00000023316	pcbp4	69	63.226	ENSPREG00000021498	-	91	63.226	Poecilia_reticulata
ENSPLAG00000023316	pcbp4	89	66.580	ENSPREG00000017370	-	85	65.274	Poecilia_reticulata
ENSPLAG00000023316	pcbp4	89	51.715	ENSPPYG00000013822	PCBP4	79	52.507	Pongo_abelii
ENSPLAG00000023316	pcbp4	89	48.284	ENSPCAG00000009515	PCBP4	87	48.537	Procavia_capensis
ENSPLAG00000023316	pcbp4	89	51.979	ENSPCOG00000027535	PCBP4	79	52.770	Propithecus_coquereli
ENSPLAG00000023316	pcbp4	89	45.349	ENSPVAG00000012474	PCBP4	88	46.047	Pteropus_vampyrus
ENSPLAG00000023316	pcbp4	89	90.625	ENSPNYG00000019234	pcbp4	87	90.625	Pundamilia_nyererei
ENSPLAG00000023316	pcbp4	89	72.135	ENSPNYG00000003098	-	85	69.713	Pundamilia_nyererei
ENSPLAG00000023316	pcbp4	89	80.260	ENSPNAG00000025434	pcbp4	80	78.701	Pygocentrus_nattereri
ENSPLAG00000023316	pcbp4	89	51.436	ENSRNOG00000012406	Pcbp4	79	52.507	Rattus_norvegicus
ENSPLAG00000023316	pcbp4	89	51.715	ENSRBIG00000043793	PCBP4	79	52.507	Rhinopithecus_bieti
ENSPLAG00000023316	pcbp4	89	51.715	ENSRROG00000034589	PCBP4	79	52.507	Rhinopithecus_roxellana
ENSPLAG00000023316	pcbp4	89	51.715	ENSSBOG00000027029	PCBP4	79	52.507	Saimiri_boliviensis_boliviensis
ENSPLAG00000023316	pcbp4	57	61.963	ENSSHAG00000007362	PCBP4	66	59.116	Sarcophilus_harrisii
ENSPLAG00000023316	pcbp4	94	67.237	ENSSFOG00015012075	PCBP4	85	66.015	Scleropages_formosus
ENSPLAG00000023316	pcbp4	76	80.769	ENSSFOG00015008221	pcbp4	60	80.645	Scleropages_formosus
ENSPLAG00000023316	pcbp4	89	84.264	ENSSMAG00000005827	pcbp4	78	80.964	Scophthalmus_maximus
ENSPLAG00000023316	pcbp4	89	69.452	ENSSMAG00000009392	-	92	68.146	Scophthalmus_maximus
ENSPLAG00000023316	pcbp4	89	71.540	ENSSDUG00000015540	-	85	70.235	Seriola_dumerili
ENSPLAG00000023316	pcbp4	89	88.542	ENSSDUG00000017719	pcbp4	88	86.979	Seriola_dumerili
ENSPLAG00000023316	pcbp4	89	71.540	ENSSLDG00000007851	-	85	70.235	Seriola_lalandi_dorsalis
ENSPLAG00000023316	pcbp4	86	53.444	ENSSPUG00000000194	PCBP4	87	47.343	Sphenodon_punctatus
ENSPLAG00000023316	pcbp4	89	70.496	ENSSPAG00000003033	-	93	69.974	Stegastes_partitus
ENSPLAG00000023316	pcbp4	89	78.553	ENSSPAG00000019058	-	91	76.486	Stegastes_partitus
ENSPLAG00000023316	pcbp4	89	51.979	ENSSSCG00000028446	PCBP4	79	52.770	Sus_scrofa
ENSPLAG00000023316	pcbp4	58	49.407	ENSTGUG00000006393	PCBP4	83	46.367	Taeniopygia_guttata
ENSPLAG00000023316	pcbp4	89	71.279	ENSTRUG00000007426	-	85	69.713	Takifugu_rubripes
ENSPLAG00000023316	pcbp4	89	63.969	ENSTNIG00000017887	-	80	63.185	Tetraodon_nigroviridis
ENSPLAG00000023316	pcbp4	89	37.381	ENSTBEG00000015770	PCBP4	100	37.972	Tupaia_belangeri
ENSPLAG00000023316	pcbp4	65	51.493	ENSTTRG00000001443	PCBP4	69	51.493	Tursiops_truncatus
ENSPLAG00000023316	pcbp4	89	51.979	ENSUAMG00000020871	PCBP4	98	52.770	Ursus_americanus
ENSPLAG00000023316	pcbp4	75	55.590	ENSUMAG00000021609	PCBP4	70	55.864	Ursus_maritimus
ENSPLAG00000023316	pcbp4	89	51.979	ENSVVUG00000026857	PCBP4	79	52.770	Vulpes_vulpes
ENSPLAG00000023316	pcbp4	89	67.021	ENSXCOG00000000111	-	100	71.186	Xiphophorus_couchianus
ENSPLAG00000023316	pcbp4	89	69.974	ENSXMAG00000024530	-	80	67.885	Xiphophorus_maculatus
ENSPLAG00000023316	pcbp4	64	93.525	ENSXMAG00000015709	pcbp4	71	93.525	Xiphophorus_maculatus
ENSPLAG00000023316	pcbp4	89	89.267	ENSXMAG00000022188	-	85	88.743	Xiphophorus_maculatus